RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 CYB5RLQ6IPT4 315 aa19.32■□□□□ 0.68
GNE-202ENST00000396594 C9orf84Q5VXU9 1444 aa19.32■□□□□ 0.68
GNE-202ENST00000396594 TIAM1Q13009 1591 aa19.32■□□□□ 0.68
GNE-202ENST00000396594 CPLX2Q6PUV4 134 aaKnown RBP19.32■□□□□ 0.68
GNE-202ENST00000396594 PEG3Q9GZU2 1588 aa19.32■□□□□ 0.68
GNE-202ENST00000396594 ANKRD30BQ9BXX2 1392 aa19.32■□□□□ 0.68
GNE-202ENST00000396594 CCDC7Q96M83 1385 aa19.32■□□□□ 0.68
GNE-202ENST00000396594 PSME1Q06323 249 aa19.31■□□□□ 0.68
GNE-202ENST00000396594 EVA1CP58658 441 aa19.31■□□□□ 0.68
GNE-202ENST00000396594 GPRASP1Q5JY77 1395 aa19.31■□□□□ 0.68
GNE-202ENST00000396594 REC8O95072 547 aa19.31■□□□□ 0.68
GNE-202ENST00000396594 CCDC141Q6ZP82 1450 aa19.3■□□□□ 0.68
GNE-202ENST00000396594 NOL10Q9BSC4 688 aaKnown RBP19.3■□□□□ 0.68
GNE-202ENST00000396594 SNAPC4Q5SXM2 1469 aa19.3■□□□□ 0.68
GNE-202ENST00000396594 TRIM6-TRIM34B2RNG4 842 aa19.29■□□□□ 0.68
GNE-202ENST00000396594 DRC7Q8IY82 874 aa19.29■□□□□ 0.68
GNE-202ENST00000396594 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.29■□□□□ 0.68
GNE-202ENST00000396594 SMG6Q86US8 1419 aaKnown RBP19.29■□□□□ 0.68
GNE-202ENST00000396594 CT47B1P0C2W7 299 aaPredicted RBP19.29■□□□□ 0.68
GNE-202ENST00000396594 GTF2E1P29083 439 aaPredicted RBP19.29■□□□□ 0.68
GNE-202ENST00000396594 IQGAP2Q13576 1575 aa19.29■□□□□ 0.68
GNE-202ENST00000396594 PLCB2Q00722 1185 aa19.29■□□□□ 0.68
GNE-202ENST00000396594 ATF3P18847 181 aa19.28■□□□□ 0.68
GNE-202ENST00000396594 CHMP3Q9Y3E7 222 aa19.27■□□□□ 0.68
GNE-202ENST00000396594 ZNF692Q9BU19 519 aaPredicted RBP19.27■□□□□ 0.68
GNE-202ENST00000396594 PPP6R1Q9UPN7 881 aa19.27■□□□□ 0.67
GNE-202ENST00000396594 THEMISQ8N1K5 641 aaPredicted RBP19.26■□□□□ 0.67
GNE-202ENST00000396594 FAM161AQ3B820 660 aa19.25■□□□□ 0.67
GNE-202ENST00000396594 SYNE3Q6ZMZ3 975 aa19.25■□□□□ 0.67
GNE-202ENST00000396594 ISY1Q9ULR0 285 aaKnown RBP19.25■□□□□ 0.67
GNE-202ENST00000396594 RNF20Q5VTR2 975 aa19.25■□□□□ 0.67
GNE-202ENST00000396594 GAS2L2Q8NHY3 880 aa19.25■□□□□ 0.67
GNE-202ENST00000396594 RRP1P56182 461 aaKnown RBP19.24■□□□□ 0.67
GNE-202ENST00000396594 SLC4A10Q6U841 1118 aa19.24■□□□□ 0.67
GNE-202ENST00000396594 IPO9Q96P70 1041 aaKnown RBP19.24■□□□□ 0.67
GNE-202ENST00000396594 PNISRQ8TF01 805 aaKnown RBP19.23■□□□□ 0.67
GNE-202ENST00000396594 ARAP1Q96P48 1450 aa19.23■□□□□ 0.67
GNE-202ENST00000396594 MINK1Q8N4C8 1332 aaPredicted RBP19.22■□□□□ 0.67
GNE-202ENST00000396594 MFAP1P55081 439 aaKnown RBP19.22■□□□□ 0.67
GNE-202ENST00000396594 ERC2O15083 957 aa19.22■□□□□ 0.67
GNE-202ENST00000396594 RAPGEF4Q8WZA2 1011 aa19.22■□□□□ 0.67
GNE-202ENST00000396594 ZNF330Q9Y3S2 320 aaPredicted RBP19.21■□□□□ 0.67
GNE-202ENST00000396594 ATAD2Q6PL18 1390 aa19.21■□□□□ 0.67
GNE-202ENST00000396594 ZKSCAN1P17029 563 aaPredicted RBP19.21■□□□□ 0.67
GNE-202ENST00000396594 AKAP17AQ02040 695 aaKnown RBP19.2■□□□□ 0.66
GNE-202ENST00000396594 KIF14Q15058 1648 aa19.19■□□□□ 0.66
GNE-202ENST00000396594 DZIP1LQ8IYY4 767 aaKnown RBP19.19■□□□□ 0.66
GNE-202ENST00000396594 CCDC47Q96A33 483 aaKnown RBP19.19■□□□□ 0.66
GNE-202ENST00000396594 TPM2P07951 284 aa19.19■□□□□ 0.66
GNE-202ENST00000396594 NAP1L5Q96NT1 182 aaPredicted RBP19.19■□□□□ 0.66
GNE-202ENST00000396594 RBM19Q9Y4C8 960 aaKnown RBP19.19■□□□□ 0.66
GNE-202ENST00000396594 FRAT2O75474 233 aaPredicted RBP19.19■□□□□ 0.66
GNE-202ENST00000396594 CCDC146Q8IYE0 955 aa19.19■□□□□ 0.66
GNE-202ENST00000396594 DIAPH3Q9NSV4 1193 aa19.19■□□□□ 0.66
GNE-202ENST00000396594 THOC2Q8NI27 1593 aaKnown RBP19.18■□□□□ 0.66
GNE-202ENST00000396594 C9orf78Q9NZ63 289 aaPredicted RBP19.17■□□□□ 0.66
GNE-202ENST00000396594 HOOK1Q9UJC3 728 aaKnown RBP19.17■□□□□ 0.66
GNE-202ENST00000396594 ZNF428Q96B54 188 aa19.17■□□□□ 0.66
GNE-202ENST00000396594 GOLGA6L3A6NEY3 463 aa19.16■□□□□ 0.66
GNE-202ENST00000396594 APBB1O00213 710 aa19.16■□□□□ 0.66
GNE-202ENST00000396594 RIPK4P57078 832 aa19.15■□□□□ 0.66
GNE-202ENST00000396594 EPRSP07814 1512 aaKnown RBP19.14■□□□□ 0.66
GNE-202ENST00000396594 HIP1O00291 1037 aa19.14■□□□□ 0.66
GNE-202ENST00000396594 G3BP1Q13283 466 aaKnown RBP eCLIP19.14■□□□□ 0.66
GNE-202ENST00000396594 LTV1Q96GA3 475 aaPredicted RBP19.14■□□□□ 0.66
GNE-202ENST00000396594 PLEKHO1Q53GL0 409 aaPredicted RBP19.14■□□□□ 0.65
GNE-202ENST00000396594 IFIT2P09913 472 aaKnown RBP19.13■□□□□ 0.65
GNE-202ENST00000396594 GNAI3P08754 354 aa19.13■□□□□ 0.65
GNE-202ENST00000396594 SF3A1Q15459 793 aaKnown RBP19.13■□□□□ 0.65
GNE-202ENST00000396594 FAM184AQ8NB25 1140 aa19.13■□□□□ 0.65
GNE-202ENST00000396594 KIF7Q2M1P5 1343 aa19.13■□□□□ 0.65
GNE-202ENST00000396594 TPM1P09493 284 aa19.12■□□□□ 0.65
GNE-202ENST00000396594 TRIM29Q14134 588 aa19.12■□□□□ 0.65
GNE-202ENST00000396594 INTS3Q68E01 1043 aaKnown RBP19.12■□□□□ 0.65
GNE-202ENST00000396594 RASSF8Q8NHQ8 419 aa19.12■□□□□ 0.65
GNE-202ENST00000396594 H3BQV1 296 aa19.11■□□□□ 0.65
GNE-202ENST00000396594 IFFO2Q5TF58 517 aa19.11■□□□□ 0.65
GNE-202ENST00000396594 ERC1Q8IUD2 1116 aa19.11■□□□□ 0.65
GNE-202ENST00000396594 NUTM2DQ5VT03 806 aaPredicted RBP19.11■□□□□ 0.65
GNE-202ENST00000396594 TPM3P06753 285 aa19.11■□□□□ 0.65
GNE-202ENST00000396594 TRDNQ13061 729 aa19.11■□□□□ 0.65
GNE-202ENST00000396594 CLSTN1O94985 981 aa19.1■□□□□ 0.65
GNE-202ENST00000396594 TRIM34Q9BYJ4 488 aa19.1■□□□□ 0.65
GNE-202ENST00000396594 CCDC30Q5VVM6 783 aa19.1■□□□□ 0.65
GNE-202ENST00000396594 MARCH6O60337 910 aa19.09■□□□□ 0.65
GNE-202ENST00000396594 BIVM-ERCC5R4GMW8 1640 aa19.09■□□□□ 0.65
GNE-202ENST00000396594 TSR1Q2NL82 804 aaKnown RBP19.09■□□□□ 0.65
GNE-202ENST00000396594 ANKRD45Q5TZF3 282 aa19.09■□□□□ 0.65
GNE-202ENST00000396594 TSPYL4Q9UJ04 414 aa19.08■□□□□ 0.64
GNE-202ENST00000396594 APAF1O14727 1248 aa19.08■□□□□ 0.64
GNE-202ENST00000396594 ANKRD20A12PQ8NF67 263 aa19.08■□□□□ 0.64
GNE-202ENST00000396594 GRIN2AQ12879 1464 aa19.07■□□□□ 0.64
GNE-202ENST00000396594 CEP89Q96ST8 783 aa19.07■□□□□ 0.64
GNE-202ENST00000396594 PDIA4P13667 645 aaKnown RBP19.07■□□□□ 0.64
GNE-202ENST00000396594 NUCB2P80303 420 aa19.07■□□□□ 0.64
GNE-202ENST00000396594 CLUAP1Q96AJ1 413 aa19.06■□□□□ 0.64
GNE-202ENST00000396594 NESP48681 1621 aa19.06■□□□□ 0.64
GNE-202ENST00000396594 MCM2P49736 904 aa19.06■□□□□ 0.64
GNE-202ENST00000396594 MEX3CQ5U5Q3 659 aaKnown RBP19.06■□□□□ 0.64
GNE-202ENST00000396594 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms