RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 RIMS2Q9UQ26 1411 aa30.88■■■□□ 2.53
FXN-202ENST00000396364 PPP1R15AO75807 674 aaPredicted RBP30.87■■■□□ 2.53
FXN-202ENST00000396364 RGL3Q3MIN7 710 aa30.87■■■□□ 2.53
FXN-202ENST00000396364 TXNDC2Q86VQ3 553 aa30.86■■■□□ 2.53
FXN-202ENST00000396364 SCAF11Q99590 1463 aaKnown RBP30.86■■■□□ 2.53
FXN-202ENST00000396364 NEUROD1Q13562 356 aa30.84■■■□□ 2.53
FXN-202ENST00000396364 ZFYVE9O95405 1425 aa30.83■■■□□ 2.53
FXN-202ENST00000396364 VGFO15240 615 aaPredicted RBP30.82■■■□□ 2.52
FXN-202ENST00000396364 SIN3AQ96ST3 1273 aa30.82■■■□□ 2.52
FXN-202ENST00000396364 DMRT2Q9Y5R5 561 aa30.82■■■□□ 2.52
FXN-202ENST00000396364 STAC3Q96MF2 364 aa30.81■■■□□ 2.52
FXN-202ENST00000396364 NEXMIFQ5QGS0 1516 aa30.81■■■□□ 2.52
FXN-202ENST00000396364 PPLO60437 1756 aa30.81■■■□□ 2.52
FXN-202ENST00000396364 STRCQ7RTU9 1775 aa30.78■■■□□ 2.52
FXN-202ENST00000396364 NCKAP5LQ9HCH0 1330 aa30.77■■■□□ 2.52
FXN-202ENST00000396364 IFT172Q9UG01 1749 aa30.77■■■□□ 2.52
FXN-202ENST00000396364 LTKP29376 864 aa30.76■■■□□ 2.51
FXN-202ENST00000396364 TONSLQ96HA7 1378 aa30.76■■■□□ 2.51
FXN-202ENST00000396364 MED14O60244 1454 aa30.76■■■□□ 2.51
FXN-202ENST00000396364 BCANQ96GW7 911 aa30.75■■■□□ 2.51
FXN-202ENST00000396364 NPHP4O75161 1426 aaPredicted RBP30.74■■■□□ 2.51
FXN-202ENST00000396364 PLEKHG1Q9ULL1 1385 aa30.74■■■□□ 2.51
FXN-202ENST00000396364 IQGAP1P46940 1657 aa30.74■■■□□ 2.51
FXN-202ENST00000396364 DCAF11Q8TEB1 546 aa30.72■■■□□ 2.51
FXN-202ENST00000396364 MYOM2P54296 1465 aa30.71■■■□□ 2.51
FXN-202ENST00000396364 NUTM2DQ5VT03 806 aaPredicted RBP30.71■■■□□ 2.51
FXN-202ENST00000396364 TIMELESSQ9UNS1 1208 aa30.69■■■□□ 2.5
FXN-202ENST00000396364 KDM2AQ9Y2K7 1162 aa30.65■■■□□ 2.5
FXN-202ENST00000396364 SETBP1Q9Y6X0 1596 aa30.64■■■□□ 2.5
FXN-202ENST00000396364 L3MBTL2Q969R5 705 aa30.64■■■□□ 2.5
FXN-202ENST00000396364 DIP2AQ14689 1571 aa30.63■■■□□ 2.49
FXN-202ENST00000396364 NRXN1Q9ULB1 1477 aa30.59■■■□□ 2.49
FXN-202ENST00000396364 ADGRF5Q8IZF2 1346 aa30.59■■■□□ 2.49
FXN-202ENST00000396364 LAMC1P11047 1609 aa30.58■■■□□ 2.49
FXN-202ENST00000396364 PIK3C2GO75747 1445 aa30.58■■■□□ 2.49
FXN-202ENST00000396364 TBX22Q9Y458 520 aa30.57■■■□□ 2.48
FXN-202ENST00000396364 SLC26A8Q96RN1 970 aa30.55■■■□□ 2.48
FXN-202ENST00000396364 NRXN3Q9Y4C0 1643 aa30.55■■■□□ 2.48
FXN-202ENST00000396364 SENP3Q9H4L4 574 aaPredicted RBP30.54■■■□□ 2.48
FXN-202ENST00000396364 ADAMTS13Q76LX8 1427 aa30.53■■■□□ 2.48
FXN-202ENST00000396364 ALKQ9UM73 1620 aa30.52■■■□□ 2.48
FXN-202ENST00000396364 PIK3R4Q99570 1358 aa30.52■■■□□ 2.48
FXN-202ENST00000396364 PRAG1Q86YV5 1406 aa30.5■■■□□ 2.47
FXN-202ENST00000396364 KIAA1210Q9ULL0 1709 aa30.48■■■□□ 2.47
FXN-202ENST00000396364 C14orf93Q9H972 538 aaKnown RBP30.47■■■□□ 2.47
FXN-202ENST00000396364 SETD1AO15047 1707 aaKnown RBP30.44■■■□□ 2.46
FXN-202ENST00000396364 CFAP70Q5T0N1 1121 aa30.42■■■□□ 2.46
FXN-202ENST00000396364 CHD2O14647 1828 aaKnown RBP30.41■■■□□ 2.46
FXN-202ENST00000396364 KCNA6P17658 529 aa30.4■■■□□ 2.46
FXN-202ENST00000396364 METP08581 1390 aa30.39■■■□□ 2.45
FXN-202ENST00000396364 NWD1Q149M9 1564 aa30.37■■■□□ 2.45
FXN-202ENST00000396364 TRPM1Q7Z4N2 1603 aa30.37■■■□□ 2.45
FXN-202ENST00000396364 ZNF335Q9H4Z2 1342 aaPredicted RBP30.36■■■□□ 2.45
FXN-202ENST00000396364 CPS1P31327 1500 aa30.36■■■□□ 2.45
FXN-202ENST00000396364 AMOTL2Q9Y2J4 779 aa30.35■■■□□ 2.45
FXN-202ENST00000396364 NKTRP30414 1462 aaKnown RBP30.35■■■□□ 2.45
FXN-202ENST00000396364 ROCK2O75116 1388 aaKnown RBP30.32■■■□□ 2.44
FXN-202ENST00000396364 TMEM132EQ6IEE7 984 aa30.32■■■□□ 2.44
FXN-202ENST00000396364 XRN1Q8IZH2 1706 aaKnown RBP30.32■■■□□ 2.44
FXN-202ENST00000396364 YTHDC2Q9H6S0 1430 aaKnown RBP30.31■■■□□ 2.44
FXN-202ENST00000396364 LRPPRCP42704 1394 aaKnown RBP30.31■■■□□ 2.44
FXN-202ENST00000396364 NBPF8Q3BBV2 869 aa30.31■■■□□ 2.44
FXN-202ENST00000396364 ADGRB1O14514 1584 aa30.31■■■□□ 2.44
FXN-202ENST00000396364 RALGAPBQ86X10 1494 aa30.31■■■□□ 2.44
FXN-202ENST00000396364 ASXL1Q8IXJ9 1541 aa30.3■■■□□ 2.44
FXN-202ENST00000396364 KNDC1Q76NI1 1749 aa30.3■■■□□ 2.44
FXN-202ENST00000396364 PTPRUQ92729 1446 aa30.29■■■□□ 2.44
FXN-202ENST00000396364 ABCC11Q96J66 1382 aa30.28■■■□□ 2.44
FXN-202ENST00000396364 ZEB1P37275 1124 aaPredicted RBP30.27■■■□□ 2.44
FXN-202ENST00000396364 STK26Q9P289 416 aa30.27■■■□□ 2.44
FXN-202ENST00000396364 STRCP1A6NGW2 1772 aa30.27■■■□□ 2.44
FXN-202ENST00000396364 TECPR2O15040 1411 aa30.26■■■□□ 2.43
FXN-202ENST00000396364 PTCH1Q13635 1447 aa30.26■■■□□ 2.43
FXN-202ENST00000396364 NBPF1Q3BBV0 1214 aa30.25■■■□□ 2.43
FXN-202ENST00000396364 LTBP4Q8N2S1 1624 aa30.25■■■□□ 2.43
FXN-202ENST00000396364 PROSER2Q86WR7 435 aaPredicted RBP30.24■■■□□ 2.43
FXN-202ENST00000396364 DLC1Q96QB1 1528 aa30.22■■■□□ 2.43
FXN-202ENST00000396364 SIRT1Q96EB6 747 aa30.22■■■□□ 2.43
FXN-202ENST00000396364 CARD11Q9BXL7 1154 aa30.22■■■□□ 2.43
FXN-202ENST00000396364 GPRASP1Q5JY77 1395 aa30.22■■■□□ 2.43
FXN-202ENST00000396364 EIF3AQ14152 1382 aaKnown RBP30.2■■■□□ 2.43
FXN-202ENST00000396364 TRAK1Q9UPV9 953 aa30.2■■■□□ 2.43
FXN-202ENST00000396364 FAM135BQ49AJ0 1406 aa30.2■■■□□ 2.42
FXN-202ENST00000396364 NCOA3Q9Y6Q9 1424 aa30.19■■■□□ 2.42
FXN-202ENST00000396364 LRRC7Q96NW7 1537 aa30.18■■■□□ 2.42
FXN-202ENST00000396364 POGKQ9P215 609 aa30.17■■■□□ 2.42
FXN-202ENST00000396364 C14orf37Q86TY3 774 aa30.16■■■□□ 2.42
FXN-202ENST00000396364 ROBO2Q9HCK4 1378 aa30.15■■■□□ 2.42
FXN-202ENST00000396364 ARHGEF28Q8N1W1 1705 aaKnown RBP30.15■■■□□ 2.42
FXN-202ENST00000396364 TMEM94Q12767 1356 aa30.15■■■□□ 2.42
FXN-202ENST00000396364 IQSEC2Q5JU85 1478 aa30.13■■■□□ 2.41
FXN-202ENST00000396364 PRAM1Q96QH2 718 aa30.11■■■□□ 2.41
FXN-202ENST00000396364 MSH6P52701 1360 aa30.09■■■□□ 2.41
FXN-202ENST00000396364 CERKQ8TCT0 537 aa30.09■■■□□ 2.41
FXN-202ENST00000396364 CENPJQ9HC77 1338 aaPredicted RBP30.07■■■□□ 2.4
FXN-202ENST00000396364 WAPLQ7Z5K2 1190 aa30.07■■■□□ 2.4
FXN-202ENST00000396364 XIRP1Q702N8 1843 aaKnown RBP30.07■■■□□ 2.4
FXN-202ENST00000396364 ADGRL3Q9HAR2 1447 aa30.05■■■□□ 2.4
FXN-202ENST00000396364 C19orf44Q9H6X5 657 aa30.05■■■□□ 2.4
FXN-202ENST00000396364 RBM33Q96EV2 1170 aaKnown RBP30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms