RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 KIAA1210Q9ULL0 1709 aa21.89■■□□□ 1.09
VAMP1-202ENST00000396308 NEXMIFQ5QGS0 1516 aa21.87■■□□□ 1.09
VAMP1-202ENST00000396308 PLPPR3Q6T4P5 718 aa21.86■■□□□ 1.09
VAMP1-202ENST00000396308 LAMC1P11047 1609 aa21.86■■□□□ 1.09
VAMP1-202ENST00000396308 CEBPAP49715 358 aaPredicted RBP21.84■■□□□ 1.09
VAMP1-202ENST00000396308 A2ML1A8K2U0 1454 aa21.83■■□□□ 1.09
VAMP1-202ENST00000396308 ZNF142P52746 1687 aaPredicted RBP21.83■■□□□ 1.09
VAMP1-202ENST00000396308 NBPF8Q3BBV2 869 aa21.83■■□□□ 1.09
VAMP1-202ENST00000396308 ROCK2O75116 1388 aaKnown RBP21.81■■□□□ 1.08
VAMP1-202ENST00000396308 PTPRMP28827 1452 aa21.81■■□□□ 1.08
VAMP1-202ENST00000396308 SETD1BQ9UPS6 1966 aaKnown RBP21.81■■□□□ 1.08
VAMP1-202ENST00000396308 CEP170BQ9Y4F5 1589 aaPredicted RBP21.8■■□□□ 1.08
VAMP1-202ENST00000396308 NRXN1Q9ULB1 1477 aa21.8■■□□□ 1.08
VAMP1-202ENST00000396308 VGFO15240 615 aaPredicted RBP21.8■■□□□ 1.08
VAMP1-202ENST00000396308 HDGFP51858 240 aaKnown RBP21.79■■□□□ 1.08
VAMP1-202ENST00000396308 ZFYVE9O95405 1425 aa21.79■■□□□ 1.08
VAMP1-202ENST00000396308 ZNF316A6NFI3 1004 aaPredicted RBP21.77■■□□□ 1.08
VAMP1-202ENST00000396308 RIMS2Q9UQ26 1411 aa21.77■■□□□ 1.08
VAMP1-202ENST00000396308 PIK3C2GO75747 1445 aa21.76■■□□□ 1.07
VAMP1-202ENST00000396308 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.76■■□□□ 1.07
VAMP1-202ENST00000396308 EIF4G2P78344 907 aaKnown RBP eCLIP21.75■■□□□ 1.07
VAMP1-202ENST00000396308 SETBP1Q9Y6X0 1596 aa21.74■■□□□ 1.07
VAMP1-202ENST00000396308 CARD11Q9BXL7 1154 aa21.74■■□□□ 1.07
VAMP1-202ENST00000396308 ADGRF5Q8IZF2 1346 aa21.72■■□□□ 1.07
VAMP1-202ENST00000396308 IQGAP1P46940 1657 aa21.72■■□□□ 1.07
VAMP1-202ENST00000396308 GPRASP1Q5JY77 1395 aa21.72■■□□□ 1.07
VAMP1-202ENST00000396308 USP47Q96K76 1375 aa21.71■■□□□ 1.07
VAMP1-202ENST00000396308 TMEM2Q9UHN6 1383 aa21.71■■□□□ 1.07
VAMP1-202ENST00000396308 SLIT1O75093 1534 aa21.7■■□□□ 1.07
VAMP1-202ENST00000396308 THEMISQ8N1K5 641 aaPredicted RBP21.7■■□□□ 1.06
VAMP1-202ENST00000396308 POLR1AO95602 1720 aaPredicted RBP21.69■■□□□ 1.06
VAMP1-202ENST00000396308 EID1Q9Y6B2 187 aa21.68■■□□□ 1.06
VAMP1-202ENST00000396308 EIF3AQ14152 1382 aaKnown RBP21.68■■□□□ 1.06
VAMP1-202ENST00000396308 ARHGAP23Q9P227 1491 aa21.66■■□□□ 1.06
VAMP1-202ENST00000396308 NUTM2DQ5VT03 806 aaPredicted RBP21.66■■□□□ 1.06
VAMP1-202ENST00000396308 SCAF11Q99590 1463 aaKnown RBP21.65■■□□□ 1.06
VAMP1-202ENST00000396308 HSPA5P11021 654 aaKnown RBP21.65■■□□□ 1.06
VAMP1-202ENST00000396308 FBXO41Q8TF61 875 aa21.65■■□□□ 1.06
VAMP1-202ENST00000396308 ALKQ9UM73 1620 aa21.63■■□□□ 1.05
VAMP1-202ENST00000396308 CFAP70Q5T0N1 1121 aa21.63■■□□□ 1.05
VAMP1-202ENST00000396308 NBPF1Q3BBV0 1214 aa21.62■■□□□ 1.05
VAMP1-202ENST00000396308 C14orf93Q9H972 538 aaKnown RBP21.62■■□□□ 1.05
VAMP1-202ENST00000396308 BCANQ96GW7 911 aa21.61■■□□□ 1.05
VAMP1-202ENST00000396308 SETD1AO15047 1707 aaKnown RBP21.6■■□□□ 1.05
VAMP1-202ENST00000396308 NRXN3Q9Y4C0 1643 aa21.6■■□□□ 1.05
VAMP1-202ENST00000396308 ADGRB1O14514 1584 aa21.6■■□□□ 1.05
VAMP1-202ENST00000396308 DIP2AQ14689 1571 aa21.6■■□□□ 1.05
VAMP1-202ENST00000396308 PLEKHG1Q9ULL1 1385 aa21.6■■□□□ 1.05
VAMP1-202ENST00000396308 TXNDC2Q86VQ3 553 aa21.58■■□□□ 1.05
VAMP1-202ENST00000396308 ARHGEF28Q8N1W1 1705 aaKnown RBP21.57■■□□□ 1.04
VAMP1-202ENST00000396308 HIRIP3Q9BW71 556 aaPredicted RBP21.56■■□□□ 1.04
VAMP1-202ENST00000396308 QRICH2Q9H0J4 1663 aa21.55■■□□□ 1.04
VAMP1-202ENST00000396308 ASXL1Q8IXJ9 1541 aa21.55■■□□□ 1.04
VAMP1-202ENST00000396308 KNDC1Q76NI1 1749 aa21.54■■□□□ 1.04
VAMP1-202ENST00000396308 ANKLE2Q86XL3 938 aa21.53■■□□□ 1.04
VAMP1-202ENST00000396308 ST20-MTHFSA0A0A6YYL1 179 aa21.52■■□□□ 1.04
VAMP1-202ENST00000396308 SLC24A1O60721 1099 aa21.52■■□□□ 1.04
VAMP1-202ENST00000396308 SENP3Q9H4L4 574 aaPredicted RBP21.51■■□□□ 1.03
VAMP1-202ENST00000396308 LMTK3Q96Q04 1460 aa21.51■■□□□ 1.03
VAMP1-202ENST00000396308 YTHDC2Q9H6S0 1430 aaKnown RBP21.5■■□□□ 1.03
VAMP1-202ENST00000396308 LTKP29376 864 aa21.49■■□□□ 1.03
VAMP1-202ENST00000396308 TMEM132EQ6IEE7 984 aa21.49■■□□□ 1.03
VAMP1-202ENST00000396308 DLC1Q96QB1 1528 aa21.48■■□□□ 1.03
VAMP1-202ENST00000396308 TRAK1Q9UPV9 953 aa21.47■■□□□ 1.03
VAMP1-202ENST00000396308 ADAMTS13Q76LX8 1427 aa21.46■■□□□ 1.03
VAMP1-202ENST00000396308 CENPJQ9HC77 1338 aaPredicted RBP21.46■■□□□ 1.03
VAMP1-202ENST00000396308 LRPPRCP42704 1394 aaKnown RBP21.46■■□□□ 1.03
VAMP1-202ENST00000396308 TMF1P82094 1093 aa21.45■■□□□ 1.02
VAMP1-202ENST00000396308 CCDC7Q96M83 1385 aa21.45■■□□□ 1.02
VAMP1-202ENST00000396308 CPS1P31327 1500 aa21.45■■□□□ 1.02
VAMP1-202ENST00000396308 CDCA8Q53HL2 280 aa21.44■■□□□ 1.02
VAMP1-202ENST00000396308 SBNO2Q9Y2G9 1366 aa21.44■■□□□ 1.02
VAMP1-202ENST00000396308 NPHP4O75161 1426 aaPredicted RBP21.44■■□□□ 1.02
VAMP1-202ENST00000396308 DIEXFQ68CQ4 756 aaKnown RBP21.43■■□□□ 1.02
VAMP1-202ENST00000396308 STK26Q9P289 416 aa21.43■■□□□ 1.02
VAMP1-202ENST00000396308 MED14O60244 1454 aa21.43■■□□□ 1.02
VAMP1-202ENST00000396308 TBX22Q9Y458 520 aa21.42■■□□□ 1.02
VAMP1-202ENST00000396308 METP08581 1390 aa21.41■■□□□ 1.02
VAMP1-202ENST00000396308 ABCC11Q96J66 1382 aa21.4■■□□□ 1.02
VAMP1-202ENST00000396308 PIK3R4Q99570 1358 aa21.4■■□□□ 1.02
VAMP1-202ENST00000396308 KIF7Q2M1P5 1343 aa21.4■■□□□ 1.02
VAMP1-202ENST00000396308 WASHC2AQ641Q2 1341 aa21.4■■□□□ 1.02
VAMP1-202ENST00000396308 POGKQ9P215 609 aa21.4■■□□□ 1.02
VAMP1-202ENST00000396308 TECPR2O15040 1411 aa21.39■■□□□ 1.02
VAMP1-202ENST00000396308 SLC26A8Q96RN1 970 aa21.39■■□□□ 1.01
VAMP1-202ENST00000396308 POLR3GLQ9BT43 218 aa21.39■■□□□ 1.01
VAMP1-202ENST00000396308 XRN1Q8IZH2 1706 aaKnown RBP21.38■■□□□ 1.01
VAMP1-202ENST00000396308 TESK2Q96S53 571 aa21.38■■□□□ 1.01
VAMP1-202ENST00000396308 CHD2O14647 1828 aaKnown RBP21.37■■□□□ 1.01
VAMP1-202ENST00000396308 FAM135BQ49AJ0 1406 aa21.37■■□□□ 1.01
VAMP1-202ENST00000396308 DISP3Q9P2K9 1392 aa21.36■■□□□ 1.01
VAMP1-202ENST00000396308 DDX10Q13206 875 aaKnown RBP21.35■■□□□ 1.01
VAMP1-202ENST00000396308 PRAM1Q96QH2 718 aa21.34■■□□□ 1.01
VAMP1-202ENST00000396308 PTCH1Q13635 1447 aa21.34■■□□□ 1.01
VAMP1-202ENST00000396308 NCKAP5LQ9HCH0 1330 aa21.33■■□□□ 1.01
VAMP1-202ENST00000396308 SIRT1Q96EB6 747 aa21.33■■□□□ 1.01
VAMP1-202ENST00000396308 EVC2Q86UK5 1308 aa21.32■■□□□ 1
VAMP1-202ENST00000396308 C11orf95C9JLR9 678 aaPredicted RBP21.32■■□□□ 1
VAMP1-202ENST00000396308 HSPA2P54652 639 aa21.32■■□□□ 1
VAMP1-202ENST00000396308 NWD1Q149M9 1564 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms