RNA–Protein interactions for RNA: ENST00000396075.5

LDHB-202, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-202ENST00000396075 SLIT1O75093 1534 aa12.8□□□□□ -0.36
LDHB-202ENST00000396075 LTKP29376 864 aa12.79□□□□□ -0.36
LDHB-202ENST00000396075 ARHGAP23Q9P227 1491 aa12.78□□□□□ -0.36
LDHB-202ENST00000396075 EFCAB6Q5THR3 1501 aa12.78□□□□□ -0.36
LDHB-202ENST00000396075 KDM5AP29375 1690 aaKnown RBP12.78□□□□□ -0.36
LDHB-202ENST00000396075 PPARGC1BQ86YN6 1023 aaKnown RBP12.78□□□□□ -0.36
LDHB-202ENST00000396075 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.78□□□□□ -0.36
LDHB-202ENST00000396075 NOS1P29475 1434 aa12.78□□□□□ -0.36
LDHB-202ENST00000396075 PPP1R15AO75807 674 aaPredicted RBP12.77□□□□□ -0.37
LDHB-202ENST00000396075 XIRP1Q702N8 1843 aaKnown RBP12.76□□□□□ -0.37
LDHB-202ENST00000396075 CHGAP10645 457 aaKnown RBP12.76□□□□□ -0.37
LDHB-202ENST00000396075 NUP155O75694 1391 aa12.76□□□□□ -0.37
LDHB-202ENST00000396075 PIK3C2BO00750 1634 aa12.76□□□□□ -0.37
LDHB-202ENST00000396075 TET3O43151 1660 aa12.74□□□□□ -0.37
LDHB-202ENST00000396075 LRRC7Q96NW7 1537 aa12.74□□□□□ -0.37
LDHB-202ENST00000396075 KCNA6P17658 529 aa12.74□□□□□ -0.37
LDHB-202ENST00000396075 SRCAPQ6ZRS2 3230 aa12.73□□□□□ -0.37
LDHB-202ENST00000396075 PROSER2Q86WR7 435 aaPredicted RBP12.72□□□□□ -0.37
LDHB-202ENST00000396075 GCC2Q8IWJ2 1684 aa12.72□□□□□ -0.37
LDHB-202ENST00000396075 UNC13BO14795 1591 aa12.72□□□□□ -0.37
LDHB-202ENST00000396075 SYNMO15061 1565 aa12.72□□□□□ -0.37
LDHB-202ENST00000396075 ADGRB3O60242 1522 aa12.72□□□□□ -0.37
LDHB-202ENST00000396075 SLC26A8Q96RN1 970 aa12.71□□□□□ -0.37
LDHB-202ENST00000396075 TBX22Q9Y458 520 aa12.69□□□□□ -0.38
LDHB-202ENST00000396075 RRBP1Q9P2E9 1410 aaKnown RBP12.69□□□□□ -0.38
LDHB-202ENST00000396075 RIMS2Q9UQ26 1411 aa12.69□□□□□ -0.38
LDHB-202ENST00000396075 IQGAP3Q86VI3 1631 aa12.69□□□□□ -0.38
LDHB-202ENST00000396075 PLEKHG1Q9ULL1 1385 aa12.69□□□□□ -0.38
LDHB-202ENST00000396075 ACIN1Q9UKV3 1341 aaKnown RBP12.68□□□□□ -0.38
LDHB-202ENST00000396075 TRIM52Q96A61 297 aa12.67□□□□□ -0.38
LDHB-202ENST00000396075 ZNF326Q5BKZ1 582 aaKnown RBP12.66□□□□□ -0.38
LDHB-202ENST00000396075 RBM33Q96EV2 1170 aaKnown RBP12.65□□□□□ -0.38
LDHB-202ENST00000396075 RGS17Q9UGC6 210 aaPredicted RBP12.65□□□□□ -0.38
LDHB-202ENST00000396075 TMEM94Q12767 1356 aa12.65□□□□□ -0.38
LDHB-202ENST00000396075 E9PCH4 1651 aa12.64□□□□□ -0.39
LDHB-202ENST00000396075 ZFYVE9O95405 1425 aa12.64□□□□□ -0.39
LDHB-202ENST00000396075 TMEM131LA2VDJ0 1609 aa12.64□□□□□ -0.39
LDHB-202ENST00000396075 C14orf37Q86TY3 774 aa12.64□□□□□ -0.39
LDHB-202ENST00000396075 MSH6P52701 1360 aa12.64□□□□□ -0.39
LDHB-202ENST00000396075 PIK3R4Q99570 1358 aa12.64□□□□□ -0.39
LDHB-202ENST00000396075 NKTRP30414 1462 aaKnown RBP12.63□□□□□ -0.39
LDHB-202ENST00000396075 NCOA3Q9Y6Q9 1424 aa12.62□□□□□ -0.39
LDHB-202ENST00000396075 MYO5BQ9ULV0 1848 aa12.62□□□□□ -0.39
LDHB-202ENST00000396075 NUTM2DQ5VT03 806 aaPredicted RBP12.62□□□□□ -0.39
LDHB-202ENST00000396075 SETD1AO15047 1707 aaKnown RBP12.62□□□□□ -0.39
LDHB-202ENST00000396075 NAIPQ13075 1403 aa12.62□□□□□ -0.39
LDHB-202ENST00000396075 FAM135BQ49AJ0 1406 aa12.62□□□□□ -0.39
LDHB-202ENST00000396075 ROBO1Q9Y6N7 1651 aa12.61□□□□□ -0.39
LDHB-202ENST00000396075 SLC4A1APQ9BWU0 796 aaKnown RBP12.61□□□□□ -0.39
LDHB-202ENST00000396075 ATF3P18847 181 aa12.6□□□□□ -0.39
LDHB-202ENST00000396075 SLAIN2Q9P270 581 aa12.6□□□□□ -0.39
LDHB-202ENST00000396075 HFM1A2PYH4 1435 aa12.6□□□□□ -0.39
LDHB-202ENST00000396075 DIP2AQ14689 1571 aa12.6□□□□□ -0.39
LDHB-202ENST00000396075 VGFO15240 615 aaPredicted RBP12.59□□□□□ -0.39
LDHB-202ENST00000396075 CADPS2Q86UW7 1296 aa12.59□□□□□ -0.39
LDHB-202ENST00000396075 C19orf44Q9H6X5 657 aa12.59□□□□□ -0.39
LDHB-202ENST00000396075 CHD2O14647 1828 aaKnown RBP12.58□□□□□ -0.4
LDHB-202ENST00000396075 NWD1Q149M9 1564 aa12.58□□□□□ -0.4
LDHB-202ENST00000396075 SPHKAPQ2M3C7 1700 aa12.58□□□□□ -0.4
LDHB-202ENST00000396075 AMOTL2Q9Y2J4 779 aa12.58□□□□□ -0.4
LDHB-202ENST00000396075 RPGRIP1LQ68CZ1 1315 aa12.58□□□□□ -0.4
LDHB-202ENST00000396075 IFFO2Q5TF58 517 aa12.57□□□□□ -0.4
LDHB-202ENST00000396075 POTEAQ6S8J7 498 aa12.57□□□□□ -0.4
LDHB-202ENST00000396075 TRPM2O94759 1503 aa12.57□□□□□ -0.4
LDHB-202ENST00000396075 PHLPP1O60346 1717 aa12.56□□□□□ -0.4
LDHB-202ENST00000396075 ADAMTS13Q76LX8 1427 aa12.54□□□□□ -0.4
LDHB-202ENST00000396075 KIF1BO60333 1816 aa12.54□□□□□ -0.4
LDHB-202ENST00000396075 SETBP1Q9Y6X0 1596 aa12.51□□□□□ -0.41
LDHB-202ENST00000396075 MPHOSPH9Q99550 1183 aa12.5□□□□□ -0.41
LDHB-202ENST00000396075 CLTCL1P53675 1640 aa12.49□□□□□ -0.41
LDHB-202ENST00000396075 CCDC144AA2RUR9 1427 aa12.49□□□□□ -0.41
LDHB-202ENST00000396075 JCADQ9P266 1359 aa12.49□□□□□ -0.41
LDHB-202ENST00000396075 DCCP43146 1447 aa12.48□□□□□ -0.41
LDHB-202ENST00000396075 UPF1Q92900 1129 aaKnown RBP eCLIP12.47□□□□□ -0.41
LDHB-202ENST00000396075 COL16A1Q07092 1604 aaPredicted RBP12.47□□□□□ -0.41
LDHB-202ENST00000396075 PTPRUQ92729 1446 aa12.46□□□□□ -0.41
LDHB-202ENST00000396075 SETD5Q9C0A6 1442 aa12.46□□□□□ -0.41
LDHB-202ENST00000396075 METP08581 1390 aa12.46□□□□□ -0.41
LDHB-202ENST00000396075 NEXMIFQ5QGS0 1516 aa12.46□□□□□ -0.42
LDHB-202ENST00000396075 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.45□□□□□ -0.42
LDHB-202ENST00000396075 ANKRD30BQ9BXX2 1392 aa12.45□□□□□ -0.42
LDHB-202ENST00000396075 LRP6O75581 1613 aa12.45□□□□□ -0.42
LDHB-202ENST00000396075 SPATA31A6Q5VVP1 1343 aa12.45□□□□□ -0.42
LDHB-202ENST00000396075 RGL3Q3MIN7 710 aa12.45□□□□□ -0.42
LDHB-202ENST00000396075 MEX3CQ5U5Q3 659 aaKnown RBP12.45□□□□□ -0.42
LDHB-202ENST00000396075 LRRC59Q96AG4 307 aaKnown RBP12.44□□□□□ -0.42
LDHB-202ENST00000396075 BRINP3Q76B58 766 aa12.43□□□□□ -0.42
LDHB-202ENST00000396075 NRXN3Q9Y4C0 1643 aa12.42□□□□□ -0.42
LDHB-202ENST00000396075 NPM3O75607 178 aaKnown RBP12.42□□□□□ -0.42
LDHB-202ENST00000396075 XRN1Q8IZH2 1706 aaKnown RBP12.42□□□□□ -0.42
LDHB-202ENST00000396075 HRCP23327 699 aa12.41□□□□□ -0.42
LDHB-202ENST00000396075 ZNF772Q68DY9 489 aaPredicted RBP12.41□□□□□ -0.42
LDHB-202ENST00000396075 ADGRL3Q9HAR2 1447 aa12.41□□□□□ -0.42
LDHB-202ENST00000396075 PTCH1Q13635 1447 aa12.4□□□□□ -0.42
LDHB-202ENST00000396075 SHPRHQ149N8 1683 aa12.39□□□□□ -0.43
LDHB-202ENST00000396075 STAC3Q96MF2 364 aa12.39□□□□□ -0.43
LDHB-202ENST00000396075 AHDC1Q5TGY3 1603 aaPredicted RBP12.39□□□□□ -0.43
LDHB-202ENST00000396075 PPLO60437 1756 aa12.38□□□□□ -0.43
LDHB-202ENST00000396075 MST1RQ04912 1400 aa12.38□□□□□ -0.43
LDHB-202ENST00000396075 NUTM2BA6NNL0 878 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms