RNA–Protein interactions for RNA: ENST00000395946.2

XCR1-202, Transcript of X-C motif chemokine receptor 1, humanhuman

TSL 1 (best)

Gene XCR1, Length 332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-202ENST00000395946 PLEKHG1Q9ULL1 1385 aa10.86□□□□□ -0.67
XCR1-202ENST00000395946 ZFYVE9O95405 1425 aa10.85□□□□□ -0.67
XCR1-202ENST00000395946 MSH6P52701 1360 aa10.85□□□□□ -0.67
XCR1-202ENST00000395946 XIRP1Q702N8 1843 aaKnown RBP10.84□□□□□ -0.67
XCR1-202ENST00000395946 ROCK1Q13464 1354 aa10.84□□□□□ -0.67
XCR1-202ENST00000395946 PIK3R4Q99570 1358 aa10.84□□□□□ -0.67
XCR1-202ENST00000395946 DIP2AQ14689 1571 aa10.84□□□□□ -0.67
XCR1-202ENST00000395946 UNC13BO14795 1591 aa10.83□□□□□ -0.68
XCR1-202ENST00000395946 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.83□□□□□ -0.68
XCR1-202ENST00000395946 GCC2Q8IWJ2 1684 aa10.82□□□□□ -0.68
XCR1-202ENST00000395946 PROSER2Q86WR7 435 aaPredicted RBP10.82□□□□□ -0.68
XCR1-202ENST00000395946 CHIC2Q9UKJ5 165 aa10.81□□□□□ -0.68
XCR1-202ENST00000395946 TBX22Q9Y458 520 aa10.81□□□□□ -0.68
XCR1-202ENST00000395946 CFAP65Q6ZU64 1925 aaKnown RBP10.81□□□□□ -0.68
XCR1-202ENST00000395946 ROBO1Q9Y6N7 1651 aa10.81□□□□□ -0.68
XCR1-202ENST00000395946 RIMS2Q9UQ26 1411 aa10.81□□□□□ -0.68
XCR1-202ENST00000395946 TMEM131LA2VDJ0 1609 aa10.8□□□□□ -0.68
XCR1-202ENST00000395946 SLC26A8Q96RN1 970 aa10.8□□□□□ -0.68
XCR1-202ENST00000395946 JCADQ9P266 1359 aa10.79□□□□□ -0.68
XCR1-202ENST00000395946 PPP1R15AO75807 674 aaPredicted RBP10.79□□□□□ -0.68
XCR1-202ENST00000395946 IQGAP3Q86VI3 1631 aa10.79□□□□□ -0.68
XCR1-202ENST00000395946 DCCP43146 1447 aa10.78□□□□□ -0.68
XCR1-202ENST00000395946 FAM50AQ14320 339 aaKnown RBP10.78□□□□□ -0.68
XCR1-202ENST00000395946 SLAIN2Q9P270 581 aa10.77□□□□□ -0.69
XCR1-202ENST00000395946 RGS17Q9UGC6 210 aaPredicted RBP10.77□□□□□ -0.69
XCR1-202ENST00000395946 CHD2O14647 1828 aaKnown RBP10.77□□□□□ -0.69
XCR1-202ENST00000395946 ADAMTS13Q76LX8 1427 aa10.76□□□□□ -0.69
XCR1-202ENST00000395946 TRPM2O94759 1503 aa10.76□□□□□ -0.69
XCR1-202ENST00000395946 CADPS2Q86UW7 1296 aa10.76□□□□□ -0.69
XCR1-202ENST00000395946 BCANQ96GW7 911 aa10.76□□□□□ -0.69
XCR1-202ENST00000395946 SPATA31A6Q5VVP1 1343 aa10.76□□□□□ -0.69
XCR1-202ENST00000395946 AHDC1Q5TGY3 1603 aaPredicted RBP10.75□□□□□ -0.69
XCR1-202ENST00000395946 COL16A1Q07092 1604 aaPredicted RBP10.74□□□□□ -0.69
XCR1-202ENST00000395946 E9PCH4 1651 aa10.74□□□□□ -0.69
XCR1-202ENST00000395946 C19orf44Q9H6X5 657 aa10.74□□□□□ -0.69
XCR1-202ENST00000395946 PHLPP1O60346 1717 aa10.74□□□□□ -0.69
XCR1-202ENST00000395946 SETBP1Q9Y6X0 1596 aa10.73□□□□□ -0.69
XCR1-202ENST00000395946 NUP155O75694 1391 aa10.72□□□□□ -0.69
XCR1-202ENST00000395946 ATF3P18847 181 aa10.71□□□□□ -0.69
XCR1-202ENST00000395946 MYO5BQ9ULV0 1848 aa10.7□□□□□ -0.7
XCR1-202ENST00000395946 SHPRHQ149N8 1683 aa10.7□□□□□ -0.7
XCR1-202ENST00000395946 ZNF772Q68DY9 489 aaPredicted RBP10.7□□□□□ -0.7
XCR1-202ENST00000395946 POTEAQ6S8J7 498 aa10.7□□□□□ -0.7
XCR1-202ENST00000395946 C14orf37Q86TY3 774 aa10.7□□□□□ -0.7
XCR1-202ENST00000395946 XRN1Q8IZH2 1706 aaKnown RBP10.7□□□□□ -0.7
XCR1-202ENST00000395946 CHGAP10645 457 aaKnown RBP10.69□□□□□ -0.7
XCR1-202ENST00000395946 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.69□□□□□ -0.7
XCR1-202ENST00000395946 PRAG1Q86YV5 1406 aa10.68□□□□□ -0.7
XCR1-202ENST00000395946 RBM33Q96EV2 1170 aaKnown RBP10.68□□□□□ -0.7
XCR1-202ENST00000395946 CDK12Q9NYV4 1490 aaPredicted RBP10.68□□□□□ -0.7
XCR1-202ENST00000395946 SETD5Q9C0A6 1442 aa10.67□□□□□ -0.7
XCR1-202ENST00000395946 SPHKAPQ2M3C7 1700 aa10.67□□□□□ -0.7
XCR1-202ENST00000395946 AMOTL2Q9Y2J4 779 aa10.67□□□□□ -0.7
XCR1-202ENST00000395946 LRP6O75581 1613 aa10.66□□□□□ -0.7
XCR1-202ENST00000395946 NRXN3Q9Y4C0 1643 aa10.66□□□□□ -0.7
XCR1-202ENST00000395946 PPP4R3CPQ6ZMV5 832 aa10.66□□□□□ -0.7
XCR1-202ENST00000395946 ASXL1Q8IXJ9 1541 aa10.66□□□□□ -0.7
XCR1-202ENST00000395946 PTPRUQ92729 1446 aa10.66□□□□□ -0.7
XCR1-202ENST00000395946 ADGRL3Q9HAR2 1447 aa10.66□□□□□ -0.7
XCR1-202ENST00000395946 BRINP3Q76B58 766 aa10.65□□□□□ -0.7
XCR1-202ENST00000395946 MST1RQ04912 1400 aa10.65□□□□□ -0.7
XCR1-202ENST00000395946 PTCH1Q13635 1447 aa10.65□□□□□ -0.7
XCR1-202ENST00000395946 MEX3CQ5U5Q3 659 aaKnown RBP10.64□□□□□ -0.71
XCR1-202ENST00000395946 NHSL1Q5SYE7 1610 aa10.64□□□□□ -0.71
XCR1-202ENST00000395946 RRBP1Q9P2E9 1410 aaKnown RBP10.64□□□□□ -0.71
XCR1-202ENST00000395946 NEXMIFQ5QGS0 1516 aa10.63□□□□□ -0.71
XCR1-202ENST00000395946 LRRC59Q96AG4 307 aaKnown RBP10.63□□□□□ -0.71
XCR1-202ENST00000395946 LAMC1P11047 1609 aa10.62□□□□□ -0.71
XCR1-202ENST00000395946 RPGRIP1LQ68CZ1 1315 aa10.61□□□□□ -0.71
XCR1-202ENST00000395946 ZNF326Q5BKZ1 582 aaKnown RBP10.61□□□□□ -0.71
XCR1-202ENST00000395946 METP08581 1390 aa10.61□□□□□ -0.71
XCR1-202ENST00000395946 CLTCL1P53675 1640 aa10.61□□□□□ -0.71
XCR1-202ENST00000395946 NAIPQ13075 1403 aa10.6□□□□□ -0.71
XCR1-202ENST00000395946 VGFO15240 615 aaPredicted RBP10.6□□□□□ -0.71
XCR1-202ENST00000395946 RXRBP28702 533 aa10.6□□□□□ -0.71
XCR1-202ENST00000395946 NUTM2DQ5VT03 806 aaPredicted RBP10.6□□□□□ -0.71
XCR1-202ENST00000395946 HFM1A2PYH4 1435 aa10.59□□□□□ -0.71
XCR1-202ENST00000395946 C1orf167Q5SNV9 1468 aa10.58□□□□□ -0.72
XCR1-202ENST00000395946 PNPLA6Q8IY17 1366 aa10.58□□□□□ -0.72
XCR1-202ENST00000395946 MAPK8IP2Q13387 824 aaPredicted RBP10.58□□□□□ -0.72
XCR1-202ENST00000395946 KIF1BO60333 1816 aa10.58□□□□□ -0.72
XCR1-202ENST00000395946 SETD1AO15047 1707 aaKnown RBP10.58□□□□□ -0.72
XCR1-202ENST00000395946 NALCNQ8IZF0 1738 aa10.58□□□□□ -0.72
XCR1-202ENST00000395946 ACIN1Q9UKV3 1341 aaKnown RBP10.58□□□□□ -0.72
XCR1-202ENST00000395946 ITGAEP38570 1179 aa10.57□□□□□ -0.72
XCR1-202ENST00000395946 UPF1Q92900 1129 aaKnown RBP eCLIP10.57□□□□□ -0.72
XCR1-202ENST00000395946 CDC42BPGQ6DT37 1551 aa10.56□□□□□ -0.72
XCR1-202ENST00000395946 AFF2P51816 1311 aa10.56□□□□□ -0.72
XCR1-202ENST00000395946 SOS2Q07890 1332 aaPredicted RBP10.56□□□□□ -0.72
XCR1-202ENST00000395946 RBM6P78332 1123 aaKnown RBP10.55□□□□□ -0.72
XCR1-202ENST00000395946 NGLY1Q96IV0 654 aa10.55□□□□□ -0.72
XCR1-202ENST00000395946 TECPR2O15040 1411 aa10.54□□□□□ -0.72
XCR1-202ENST00000395946 ROBO2Q9HCK4 1378 aa10.53□□□□□ -0.72
XCR1-202ENST00000395946 NUTM2BA6NNL0 878 aaPredicted RBP10.53□□□□□ -0.72
XCR1-202ENST00000395946 NUTM2EB1AL46 878 aaPredicted RBP10.53□□□□□ -0.72
XCR1-202ENST00000395946 POTEDQ86YR6 584 aa10.53□□□□□ -0.72
XCR1-202ENST00000395946 NUTM2AQ8IVF1 878 aaPredicted RBP10.53□□□□□ -0.72
XCR1-202ENST00000395946 TRIM52Q96A61 297 aa10.53□□□□□ -0.72
XCR1-202ENST00000395946 COL22A1Q8NFW1 1626 aaPredicted RBP10.53□□□□□ -0.72
XCR1-202ENST00000395946 NPHP3Q7Z494 1330 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms