RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 PROSER2Q86WR7 435 aaPredicted RBP20.89■□□□□ 0.93
SCAF11-203ENST00000395453 ROBO1Q9Y6N7 1651 aa20.88■□□□□ 0.93
SCAF11-203ENST00000395453 RNF39Q9H2S5 420 aa20.87■□□□□ 0.93
SCAF11-203ENST00000395453 PIK3C2BO00750 1634 aa20.87■□□□□ 0.93
SCAF11-203ENST00000395453 SLC26A8Q96RN1 970 aa20.85■□□□□ 0.93
SCAF11-203ENST00000395453 EFCAB6Q5THR3 1501 aa20.85■□□□□ 0.93
SCAF11-203ENST00000395453 ANKRD50Q9ULJ7 1429 aa20.84■□□□□ 0.93
SCAF11-203ENST00000395453 IDI1Q13907 227 aa20.83■□□□□ 0.93
SCAF11-203ENST00000395453 RBM33Q96EV2 1170 aaKnown RBP20.83■□□□□ 0.93
SCAF11-203ENST00000395453 KDM5AP29375 1690 aaKnown RBP20.82■□□□□ 0.92
SCAF11-203ENST00000395453 MSH6P52701 1360 aa20.82■□□□□ 0.92
SCAF11-203ENST00000395453 JCADQ9P266 1359 aa20.82■□□□□ 0.92
SCAF11-203ENST00000395453 TET3O43151 1660 aa20.82■□□□□ 0.92
SCAF11-203ENST00000395453 NKTRP30414 1462 aaKnown RBP20.81■□□□□ 0.92
SCAF11-203ENST00000395453 SLAIN2Q9P270 581 aa20.8■□□□□ 0.92
SCAF11-203ENST00000395453 NOS1P29475 1434 aa20.79■□□□□ 0.92
SCAF11-203ENST00000395453 ROCK1Q13464 1354 aa20.79■□□□□ 0.92
SCAF11-203ENST00000395453 SETD1AO15047 1707 aaKnown RBP20.78■□□□□ 0.92
SCAF11-203ENST00000395453 BCANQ96GW7 911 aa20.78■□□□□ 0.92
SCAF11-203ENST00000395453 PHLPP1O60346 1717 aa20.77■□□□□ 0.92
SCAF11-203ENST00000395453 NWD1Q149M9 1564 aa20.77■□□□□ 0.92
SCAF11-203ENST00000395453 PPARGC1BQ86YN6 1023 aaKnown RBP20.76■□□□□ 0.91
SCAF11-203ENST00000395453 RPRD2Q5VT52 1461 aaKnown RBP20.74■□□□□ 0.91
SCAF11-203ENST00000395453 SLC52A1Q9NWF4 448 aa20.74■□□□□ 0.91
SCAF11-203ENST00000395453 SPATA31A6Q5VVP1 1343 aa20.72■□□□□ 0.91
SCAF11-203ENST00000395453 UNC13BO14795 1591 aa20.72■□□□□ 0.91
SCAF11-203ENST00000395453 ZNF772Q68DY9 489 aaPredicted RBP20.72■□□□□ 0.91
SCAF11-203ENST00000395453 ADGRB3O60242 1522 aa20.72■□□□□ 0.91
SCAF11-203ENST00000395453 MEX3CQ5U5Q3 659 aaKnown RBP20.71■□□□□ 0.91
SCAF11-203ENST00000395453 UPF1Q92900 1129 aaKnown RBP eCLIP20.71■□□□□ 0.91
SCAF11-203ENST00000395453 HDGFP51858 240 aaKnown RBP20.69■□□□□ 0.9
SCAF11-203ENST00000395453 COL16A1Q07092 1604 aaPredicted RBP20.68■□□□□ 0.9
SCAF11-203ENST00000395453 GCC2Q8IWJ2 1684 aa20.68■□□□□ 0.9
SCAF11-203ENST00000395453 PLEKHG1Q9ULL1 1385 aa20.67■□□□□ 0.9
SCAF11-203ENST00000395453 NCOA3Q9Y6Q9 1424 aa20.67■□□□□ 0.9
SCAF11-203ENST00000395453 ITGAEP38570 1179 aa20.67■□□□□ 0.9
SCAF11-203ENST00000395453 TRIM52Q96A61 297 aa20.67■□□□□ 0.9
SCAF11-203ENST00000395453 PPP1R15AO75807 674 aaPredicted RBP20.66■□□□□ 0.9
SCAF11-203ENST00000395453 LRP6O75581 1613 aa20.66■□□□□ 0.9
SCAF11-203ENST00000395453 CHD2O14647 1828 aaKnown RBP20.65■□□□□ 0.9
SCAF11-203ENST00000395453 C14orf37Q86TY3 774 aa20.65■□□□□ 0.9
SCAF11-203ENST00000395453 IQGAP3Q86VI3 1631 aa20.65■□□□□ 0.9
SCAF11-203ENST00000395453 RRBP1Q9P2E9 1410 aaKnown RBP20.65■□□□□ 0.9
SCAF11-203ENST00000395453 TBX22Q9Y458 520 aa20.64■□□□□ 0.89
SCAF11-203ENST00000395453 ZFYVE9O95405 1425 aa20.64■□□□□ 0.89
SCAF11-203ENST00000395453 E9PCH4 1651 aa20.63■□□□□ 0.89
SCAF11-203ENST00000395453 CADPS2Q86UW7 1296 aa20.63■□□□□ 0.89
SCAF11-203ENST00000395453 RXRBP28702 533 aa20.62■□□□□ 0.89
SCAF11-203ENST00000395453 NUP155O75694 1391 aa20.62■□□□□ 0.89
SCAF11-203ENST00000395453 RIMS2Q9UQ26 1411 aa20.62■□□□□ 0.89
SCAF11-203ENST00000395453 C19orf44Q9H6X5 657 aa20.61■□□□□ 0.89
SCAF11-203ENST00000395453 ATF3P18847 181 aa20.6■□□□□ 0.89
SCAF11-203ENST00000395453 C1QBPQ07021 282 aaKnown RBP20.6■□□□□ 0.89
SCAF11-203ENST00000395453 TMEM131LA2VDJ0 1609 aa20.6■□□□□ 0.89
SCAF11-203ENST00000395453 AHDC1Q5TGY3 1603 aaPredicted RBP20.6■□□□□ 0.89
SCAF11-203ENST00000395453 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.59■□□□□ 0.89
SCAF11-203ENST00000395453 MYO5BQ9ULV0 1848 aa20.58■□□□□ 0.89
SCAF11-203ENST00000395453 SHPRHQ149N8 1683 aa20.58■□□□□ 0.89
SCAF11-203ENST00000395453 CDK12Q9NYV4 1490 aaPredicted RBP20.56■□□□□ 0.88
SCAF11-203ENST00000395453 PIK3R4Q99570 1358 aa20.55■□□□□ 0.88
SCAF11-203ENST00000395453 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.55■□□□□ 0.88
SCAF11-203ENST00000395453 NUTM2BA6NNL0 878 aaPredicted RBP20.53■□□□□ 0.88
SCAF11-203ENST00000395453 NUTM2EB1AL46 878 aaPredicted RBP20.53■□□□□ 0.88
SCAF11-203ENST00000395453 NCBP3Q53F19 620 aaKnown RBP20.53■□□□□ 0.88
SCAF11-203ENST00000395453 NUTM2AQ8IVF1 878 aaPredicted RBP20.53■□□□□ 0.88
SCAF11-203ENST00000395453 NAIPQ13075 1403 aa20.53■□□□□ 0.88
SCAF11-203ENST00000395453 ADAMTS13Q76LX8 1427 aa20.53■□□□□ 0.88
SCAF11-203ENST00000395453 CHGAP10645 457 aaKnown RBP20.53■□□□□ 0.88
SCAF11-203ENST00000395453 BRINP3Q76B58 766 aa20.53■□□□□ 0.88
SCAF11-203ENST00000395453 DIP2AQ14689 1571 aa20.52■□□□□ 0.88
SCAF11-203ENST00000395453 SRCAPQ6ZRS2 3230 aa20.51■□□□□ 0.87
SCAF11-203ENST00000395453 AFF2P51816 1311 aa20.5■□□□□ 0.87
SCAF11-203ENST00000395453 NUTM2DQ5VT03 806 aaPredicted RBP20.5■□□□□ 0.87
SCAF11-203ENST00000395453 AMOTL2Q9Y2J4 779 aa20.49■□□□□ 0.87
SCAF11-203ENST00000395453 DCCP43146 1447 aa20.47■□□□□ 0.87
SCAF11-203ENST00000395453 SETD5Q9C0A6 1442 aa20.47■□□□□ 0.87
SCAF11-203ENST00000395453 SPHKAPQ2M3C7 1700 aa20.46■□□□□ 0.87
SCAF11-203ENST00000395453 TRPM2O94759 1503 aa20.45■□□□□ 0.86
SCAF11-203ENST00000395453 HFM1A2PYH4 1435 aa20.45■□□□□ 0.86
SCAF11-203ENST00000395453 LRRC59Q96AG4 307 aaKnown RBP20.45■□□□□ 0.86
SCAF11-203ENST00000395453 RBM6P78332 1123 aaKnown RBP20.44■□□□□ 0.86
SCAF11-203ENST00000395453 QTRT2Q9H974 415 aaKnown RBP20.44■□□□□ 0.86
SCAF11-203ENST00000395453 ASXL1Q8IXJ9 1541 aa20.43■□□□□ 0.86
SCAF11-203ENST00000395453 PTPRUQ92729 1446 aa20.43■□□□□ 0.86
SCAF11-203ENST00000395453 C8orf37Q96NL8 207 aa20.42■□□□□ 0.86
SCAF11-203ENST00000395453 RGS12O14924 1447 aa20.41■□□□□ 0.86
SCAF11-203ENST00000395453 MST1RQ04912 1400 aa20.4■□□□□ 0.86
SCAF11-203ENST00000395453 NHSL1Q5SYE7 1610 aa20.38■□□□□ 0.85
SCAF11-203ENST00000395453 NGLY1Q96IV0 654 aa20.37■□□□□ 0.85
SCAF11-203ENST00000395453 CLTCL1P53675 1640 aa20.36■□□□□ 0.85
SCAF11-203ENST00000395453 PNPLA6Q8IY17 1366 aa20.36■□□□□ 0.85
SCAF11-203ENST00000395453 XRN1Q8IZH2 1706 aaKnown RBP20.34■□□□□ 0.85
SCAF11-203ENST00000395453 ATAD2Q6PL18 1390 aa20.34■□□□□ 0.85
SCAF11-203ENST00000395453 ZNF326Q5BKZ1 582 aaKnown RBP20.33■□□□□ 0.85
SCAF11-203ENST00000395453 DDX17Q92841 729 aaKnown RBP20.33■□□□□ 0.85
SCAF11-203ENST00000395453 NRXN3Q9Y4C0 1643 aa20.33■□□□□ 0.85
SCAF11-203ENST00000395453 SETBP1Q9Y6X0 1596 aa20.33■□□□□ 0.85
SCAF11-203ENST00000395453 SLC4A1APQ9BWU0 796 aaKnown RBP20.32■□□□□ 0.84
SCAF11-203ENST00000395453 ADAMTS2O95450 1211 aa20.31■□□□□ 0.84
SCAF11-203ENST00000395453 ADGRL3Q9HAR2 1447 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms