RNA–Protein interactions for RNA: ENST00000395388.6

HLA-DRA-202, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DRA, Length 1,280 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-202ENST00000395388 TMEM2Q9UHN6 1383 aa18.13■□□□□ 0.49
HLA-DRA-202ENST00000395388 MYO5BQ9ULV0 1848 aa18.1■□□□□ 0.49
HLA-DRA-202ENST00000395388 RIMS2Q9UQ26 1411 aa18.1■□□□□ 0.49
HLA-DRA-202ENST00000395388 VGFO15240 615 aaPredicted RBP18.1■□□□□ 0.49
HLA-DRA-202ENST00000395388 BCANQ96GW7 911 aa18.1■□□□□ 0.49
HLA-DRA-202ENST00000395388 NEURL4Q96JN8 1562 aa18.09■□□□□ 0.49
HLA-DRA-202ENST00000395388 SPATA31E1Q6ZUB1 1445 aa18.09■□□□□ 0.49
HLA-DRA-202ENST00000395388 STAC3Q96MF2 364 aa18.09■□□□□ 0.49
HLA-DRA-202ENST00000395388 TONSLQ96HA7 1378 aa18.08■□□□□ 0.49
HLA-DRA-202ENST00000395388 NUTM2DQ5VT03 806 aaPredicted RBP18.08■□□□□ 0.48
HLA-DRA-202ENST00000395388 DCAF11Q8TEB1 546 aa18.08■□□□□ 0.48
HLA-DRA-202ENST00000395388 SLIT1O75093 1534 aa18.08■□□□□ 0.48
HLA-DRA-202ENST00000395388 NCKAP5LQ9HCH0 1330 aa18.07■□□□□ 0.48
HLA-DRA-202ENST00000395388 LTKP29376 864 aa18.07■□□□□ 0.48
HLA-DRA-202ENST00000395388 KDM2AQ9Y2K7 1162 aa18.07■□□□□ 0.48
HLA-DRA-202ENST00000395388 DMRT2Q9Y5R5 561 aa18.07■□□□□ 0.48
HLA-DRA-202ENST00000395388 ARHGAP23Q9P227 1491 aa18.07■□□□□ 0.48
HLA-DRA-202ENST00000395388 TIMELESSQ9UNS1 1208 aa18.05■□□□□ 0.48
HLA-DRA-202ENST00000395388 SCAF11Q99590 1463 aaKnown RBP18.04■□□□□ 0.48
HLA-DRA-202ENST00000395388 L3MBTL2Q969R5 705 aa18.04■□□□□ 0.48
HLA-DRA-202ENST00000395388 ZFYVE9O95405 1425 aa18.04■□□□□ 0.48
HLA-DRA-202ENST00000395388 NEXMIFQ5QGS0 1516 aa18.02■□□□□ 0.47
HLA-DRA-202ENST00000395388 PPLO60437 1756 aa18■□□□□ 0.47
HLA-DRA-202ENST00000395388 PLEKHG1Q9ULL1 1385 aa18■□□□□ 0.47
HLA-DRA-202ENST00000395388 POLR1AO95602 1720 aaPredicted RBP18■□□□□ 0.47
HLA-DRA-202ENST00000395388 NPHP4O75161 1426 aaPredicted RBP17.99■□□□□ 0.47
HLA-DRA-202ENST00000395388 ADGRF5Q8IZF2 1346 aa17.98■□□□□ 0.47
HLA-DRA-202ENST00000395388 MED14O60244 1454 aa17.97■□□□□ 0.47
HLA-DRA-202ENST00000395388 MYOM2P54296 1465 aa17.96■□□□□ 0.47
HLA-DRA-202ENST00000395388 IFT172Q9UG01 1749 aa17.96■□□□□ 0.47
HLA-DRA-202ENST00000395388 STRCQ7RTU9 1775 aa17.96■□□□□ 0.47
HLA-DRA-202ENST00000395388 SLC26A8Q96RN1 970 aa17.95■□□□□ 0.46
HLA-DRA-202ENST00000395388 TBX22Q9Y458 520 aa17.95■□□□□ 0.46
HLA-DRA-202ENST00000395388 IQGAP1P46940 1657 aa17.93■□□□□ 0.46
HLA-DRA-202ENST00000395388 C14orf93Q9H972 538 aaKnown RBP17.91■□□□□ 0.46
HLA-DRA-202ENST00000395388 CFAP70Q5T0N1 1121 aa17.9■□□□□ 0.46
HLA-DRA-202ENST00000395388 PIK3C2GO75747 1445 aa17.89■□□□□ 0.46
HLA-DRA-202ENST00000395388 NRXN1Q9ULB1 1477 aa17.89■□□□□ 0.45
HLA-DRA-202ENST00000395388 SETBP1Q9Y6X0 1596 aa17.89■□□□□ 0.45
HLA-DRA-202ENST00000395388 ADAMTS13Q76LX8 1427 aa17.88■□□□□ 0.45
HLA-DRA-202ENST00000395388 PRAG1Q86YV5 1406 aa17.88■□□□□ 0.45
HLA-DRA-202ENST00000395388 DIP2AQ14689 1571 aa17.87■□□□□ 0.45
HLA-DRA-202ENST00000395388 ALKQ9UM73 1620 aa17.87■□□□□ 0.45
HLA-DRA-202ENST00000395388 ZEB1P37275 1124 aaPredicted RBP17.86■□□□□ 0.45
HLA-DRA-202ENST00000395388 PIK3R4Q99570 1358 aa17.86■□□□□ 0.45
HLA-DRA-202ENST00000395388 KCNA6P17658 529 aa17.85■□□□□ 0.45
HLA-DRA-202ENST00000395388 NBPF8Q3BBV2 869 aa17.85■□□□□ 0.45
HLA-DRA-202ENST00000395388 LAMC1P11047 1609 aa17.84■□□□□ 0.45
HLA-DRA-202ENST00000395388 TMEM132EQ6IEE7 984 aa17.84■□□□□ 0.45
HLA-DRA-202ENST00000395388 NRXN3Q9Y4C0 1643 aa17.83■□□□□ 0.45
HLA-DRA-202ENST00000395388 AMOTL2Q9Y2J4 779 aa17.83■□□□□ 0.44
HLA-DRA-202ENST00000395388 METP08581 1390 aa17.82■□□□□ 0.44
HLA-DRA-202ENST00000395388 STK26Q9P289 416 aa17.82■□□□□ 0.44
HLA-DRA-202ENST00000395388 NBPF1Q3BBV0 1214 aa17.81■□□□□ 0.44
HLA-DRA-202ENST00000395388 KIAA1210Q9ULL0 1709 aa17.81■□□□□ 0.44
HLA-DRA-202ENST00000395388 ROCK2O75116 1388 aaKnown RBP17.8■□□□□ 0.44
HLA-DRA-202ENST00000395388 ADRA2BP18089 450 aa17.8■□□□□ 0.44
HLA-DRA-202ENST00000395388 ZNF335Q9H4Z2 1342 aaPredicted RBP17.79■□□□□ 0.44
HLA-DRA-202ENST00000395388 PROSER2Q86WR7 435 aaPredicted RBP17.78■□□□□ 0.44
HLA-DRA-202ENST00000395388 CARD11Q9BXL7 1154 aa17.78■□□□□ 0.44
HLA-DRA-202ENST00000395388 LRPPRCP42704 1394 aaKnown RBP17.78■□□□□ 0.44
HLA-DRA-202ENST00000395388 TRAK1Q9UPV9 953 aa17.77■□□□□ 0.44
HLA-DRA-202ENST00000395388 YTHDC2Q9H6S0 1430 aaKnown RBP17.77■□□□□ 0.44
HLA-DRA-202ENST00000395388 SETD1AO15047 1707 aaKnown RBP17.77■□□□□ 0.44
HLA-DRA-202ENST00000395388 CHD2O14647 1828 aaKnown RBP17.77■□□□□ 0.43
HLA-DRA-202ENST00000395388 TRPM1Q7Z4N2 1603 aa17.76■□□□□ 0.43
HLA-DRA-202ENST00000395388 ABCC11Q96J66 1382 aa17.76■□□□□ 0.43
HLA-DRA-202ENST00000395388 PTPRUQ92729 1446 aa17.75■□□□□ 0.43
HLA-DRA-202ENST00000395388 SIRT1Q96EB6 747 aa17.75■□□□□ 0.43
HLA-DRA-202ENST00000395388 POGKQ9P215 609 aa17.75■□□□□ 0.43
HLA-DRA-202ENST00000395388 RALGAPBQ86X10 1494 aa17.75■□□□□ 0.43
HLA-DRA-202ENST00000395388 ADGRB1O14514 1584 aa17.73■□□□□ 0.43
HLA-DRA-202ENST00000395388 CPS1P31327 1500 aa17.72■□□□□ 0.43
HLA-DRA-202ENST00000395388 C14orf37Q86TY3 774 aa17.72■□□□□ 0.43
HLA-DRA-202ENST00000395388 ASXL1Q8IXJ9 1541 aa17.72■□□□□ 0.43
HLA-DRA-202ENST00000395388 NWD1Q149M9 1564 aa17.71■□□□□ 0.43
HLA-DRA-202ENST00000395388 NKTRP30414 1462 aaKnown RBP17.71■□□□□ 0.43
HLA-DRA-202ENST00000395388 GPRASP1Q5JY77 1395 aa17.71■□□□□ 0.43
HLA-DRA-202ENST00000395388 EIF3AQ14152 1382 aaKnown RBP17.7■□□□□ 0.42
HLA-DRA-202ENST00000395388 WAPLQ7Z5K2 1190 aa17.69■□□□□ 0.42
HLA-DRA-202ENST00000395388 PRAM1Q96QH2 718 aa17.69■□□□□ 0.42
HLA-DRA-202ENST00000395388 TECPR2O15040 1411 aa17.69■□□□□ 0.42
HLA-DRA-202ENST00000395388 XRN1Q8IZH2 1706 aaKnown RBP17.69■□□□□ 0.42
HLA-DRA-202ENST00000395388 PTCH1Q13635 1447 aa17.68■□□□□ 0.42
HLA-DRA-202ENST00000395388 FAM135BQ49AJ0 1406 aa17.68■□□□□ 0.42
HLA-DRA-202ENST00000395388 STRCP1A6NGW2 1772 aa17.68■□□□□ 0.42
HLA-DRA-202ENST00000395388 DLC1Q96QB1 1528 aa17.67■□□□□ 0.42
HLA-DRA-202ENST00000395388 ROBO2Q9HCK4 1378 aa17.67■□□□□ 0.42
HLA-DRA-202ENST00000395388 KNDC1Q76NI1 1749 aa17.67■□□□□ 0.42
HLA-DRA-202ENST00000395388 SAFB2Q14151 953 aaKnown RBP eCLIP17.67■□□□□ 0.42
HLA-DRA-202ENST00000395388 RBM33Q96EV2 1170 aaKnown RBP17.67■□□□□ 0.42
HLA-DRA-202ENST00000395388 TMEM94Q12767 1356 aa17.66■□□□□ 0.42
HLA-DRA-202ENST00000395388 NCOA3Q9Y6Q9 1424 aa17.66■□□□□ 0.42
HLA-DRA-202ENST00000395388 LTBP4Q8N2S1 1624 aa17.66■□□□□ 0.42
HLA-DRA-202ENST00000395388 CENPJQ9HC77 1338 aaPredicted RBP17.66■□□□□ 0.42
HLA-DRA-202ENST00000395388 EIF4G2P78344 907 aaKnown RBP eCLIP17.65■□□□□ 0.42
HLA-DRA-202ENST00000395388 LRRC7Q96NW7 1537 aa17.65■□□□□ 0.42
HLA-DRA-202ENST00000395388 SLC24A1O60721 1099 aa17.64■□□□□ 0.41
HLA-DRA-202ENST00000395388 CERKQ8TCT0 537 aa17.64■□□□□ 0.41
HLA-DRA-202ENST00000395388 C19orf44Q9H6X5 657 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms