RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 GPRASP1Q5JY77 1395 aa21.12■□□□□ 0.97
RAPGEF3-203ENST00000395360 ZMYM3Q14202 1370 aa21.11■□□□□ 0.97
RAPGEF3-203ENST00000395360 TSHZ2Q9NRE2 1034 aa21.11■□□□□ 0.97
RAPGEF3-203ENST00000395360 RIMS1Q86UR5 1692 aaKnown RBP21.08■□□□□ 0.97
RAPGEF3-203ENST00000395360 PTPRTO14522 1441 aa21.07■□□□□ 0.96
RAPGEF3-203ENST00000395360 IRX6P78412 446 aaPredicted RBP21.07■□□□□ 0.96
RAPGEF3-203ENST00000395360 NOS1P29475 1434 aa21.05■□□□□ 0.96
RAPGEF3-203ENST00000395360 LAMC1P11047 1609 aa21.05■□□□□ 0.96
RAPGEF3-203ENST00000395360 TMC1Q8TDI8 760 aa21.05■□□□□ 0.96
RAPGEF3-203ENST00000395360 C3P01024 1663 aa21.05■□□□□ 0.96
RAPGEF3-203ENST00000395360 SPHKAPQ2M3C7 1700 aa21.04■□□□□ 0.96
RAPGEF3-203ENST00000395360 PREX1Q8TCU6 1659 aa21.04■□□□□ 0.96
RAPGEF3-203ENST00000395360 TRPM2O94759 1503 aa21.04■□□□□ 0.96
RAPGEF3-203ENST00000395360 SPATA31D1Q6ZQQ2 1576 aa21.04■□□□□ 0.96
RAPGEF3-203ENST00000395360 ERVK-7P63135 1459 aa21.04■□□□□ 0.96
RAPGEF3-203ENST00000395360 TESK2Q96S53 571 aa21.03■□□□□ 0.96
RAPGEF3-203ENST00000395360 PNISRQ8TF01 805 aaKnown RBP21.02■□□□□ 0.96
RAPGEF3-203ENST00000395360 RALBP1Q15311 655 aa21.01■□□□□ 0.95
RAPGEF3-203ENST00000395360 PTPRMP28827 1452 aa21.01■□□□□ 0.95
RAPGEF3-203ENST00000395360 KTN1Q86UP2 1357 aaKnown RBP21.01■□□□□ 0.95
RAPGEF3-203ENST00000395360 MYBBP1AQ9BQG0 1328 aaKnown RBP21■□□□□ 0.95
RAPGEF3-203ENST00000395360 DISP3Q9P2K9 1392 aa21■□□□□ 0.95
RAPGEF3-203ENST00000395360 FBXO31Q5XUX0 539 aaPredicted RBP20.99■□□□□ 0.95
RAPGEF3-203ENST00000395360 KDM4FA0A1W2PPD8 638 aa20.98■□□□□ 0.95
RAPGEF3-203ENST00000395360 SYNMO15061 1565 aa20.98■□□□□ 0.95
RAPGEF3-203ENST00000395360 CFAP65Q6ZU64 1925 aaKnown RBP20.98■□□□□ 0.95
RAPGEF3-203ENST00000395360 CEBPAP49715 358 aaPredicted RBP20.97■□□□□ 0.95
RAPGEF3-203ENST00000395360 BRD4O60885 1362 aaPredicted RBP20.97■□□□□ 0.95
RAPGEF3-203ENST00000395360 SLC52A1Q9NWF4 448 aa20.96■□□□□ 0.95
RAPGEF3-203ENST00000395360 CLTCL1P53675 1640 aa20.96■□□□□ 0.95
RAPGEF3-203ENST00000395360 TNRQ92752 1358 aa20.96■□□□□ 0.95
RAPGEF3-203ENST00000395360 PIK3C2BO00750 1634 aa20.95■□□□□ 0.94
RAPGEF3-203ENST00000395360 PER1O15534 1290 aaPredicted RBP20.95■□□□□ 0.94
RAPGEF3-203ENST00000395360 TMF1P82094 1093 aa20.95■□□□□ 0.94
RAPGEF3-203ENST00000395360 SENP3-EIF4A1A0A087X0R7 540 aa20.94■□□□□ 0.94
RAPGEF3-203ENST00000395360 ERICH6BQ5W0A0 696 aa20.93■□□□□ 0.94
RAPGEF3-203ENST00000395360 PARD3Q8TEW0 1356 aa20.93■□□□□ 0.94
RAPGEF3-203ENST00000395360 NLRP1Q9C000 1473 aa20.92■□□□□ 0.94
RAPGEF3-203ENST00000395360 STAC3Q96MF2 364 aa20.91■□□□□ 0.94
RAPGEF3-203ENST00000395360 LRPPRCP42704 1394 aaKnown RBP20.91■□□□□ 0.94
RAPGEF3-203ENST00000395360 SMG6Q86US8 1419 aaKnown RBP20.91■□□□□ 0.94
RAPGEF3-203ENST00000395360 UGGT1Q9NYU2 1555 aa20.9■□□□□ 0.94
RAPGEF3-203ENST00000395360 PANK3Q9H999 370 aa20.9■□□□□ 0.94
RAPGEF3-203ENST00000395360 NLRP13Q86W25 1043 aa20.9■□□□□ 0.94
RAPGEF3-203ENST00000395360 NEURL4Q96JN8 1562 aa20.9■□□□□ 0.94
RAPGEF3-203ENST00000395360 NUDCQ9Y266 331 aa20.89■□□□□ 0.93
RAPGEF3-203ENST00000395360 SETD1BQ9UPS6 1966 aaKnown RBP20.89■□□□□ 0.93
RAPGEF3-203ENST00000395360 IDI1Q13907 227 aa20.88■□□□□ 0.93
RAPGEF3-203ENST00000395360 PLPPR3Q6T4P5 718 aa20.88■□□□□ 0.93
RAPGEF3-203ENST00000395360 CC2D1BQ5T0F9 858 aaKnown RBP20.88■□□□□ 0.93
RAPGEF3-203ENST00000395360 MYO3AQ8NEV4 1616 aa20.87■□□□□ 0.93
RAPGEF3-203ENST00000395360 PPP4R2Q9NY27 417 aa20.87■□□□□ 0.93
RAPGEF3-203ENST00000395360 KIF1BO60333 1816 aa20.86■□□□□ 0.93
RAPGEF3-203ENST00000395360 IQGAP1P46940 1657 aa20.86■□□□□ 0.93
RAPGEF3-203ENST00000395360 KDM5AP29375 1690 aaKnown RBP20.86■□□□□ 0.93
RAPGEF3-203ENST00000395360 ADGRB3O60242 1522 aa20.85■□□□□ 0.93
RAPGEF3-203ENST00000395360 SCAF11Q99590 1463 aaKnown RBP20.84■□□□□ 0.93
RAPGEF3-203ENST00000395360 A2ML1A8K2U0 1454 aa20.83■□□□□ 0.93
RAPGEF3-203ENST00000395360 TMEM131LA2VDJ0 1609 aa20.83■□□□□ 0.92
RAPGEF3-203ENST00000395360 ZNF142P52746 1687 aaPredicted RBP20.82■□□□□ 0.92
RAPGEF3-203ENST00000395360 CEP170BQ9Y4F5 1589 aaPredicted RBP20.81■□□□□ 0.92
RAPGEF3-203ENST00000395360 STAG3Q9UJ98 1225 aa20.79■□□□□ 0.92
RAPGEF3-203ENST00000395360 UBR1Q8IWV7 1749 aa20.79■□□□□ 0.92
RAPGEF3-203ENST00000395360 CHGAP10645 457 aaKnown RBP20.78■□□□□ 0.92
RAPGEF3-203ENST00000395360 CDCA8Q53HL2 280 aa20.78■□□□□ 0.92
RAPGEF3-203ENST00000395360 RBM19Q9Y4C8 960 aaKnown RBP20.78■□□□□ 0.92
RAPGEF3-203ENST00000395360 CFAP70Q5T0N1 1121 aa20.77■□□□□ 0.92
RAPGEF3-203ENST00000395360 EIF3AQ14152 1382 aaKnown RBP20.77■□□□□ 0.92
RAPGEF3-203ENST00000395360 RPGRIP1LQ68CZ1 1315 aa20.77■□□□□ 0.92
RAPGEF3-203ENST00000395360 ADGRF5Q8IZF2 1346 aa20.77■□□□□ 0.92
RAPGEF3-203ENST00000395360 B4GALNT3Q6L9W6 998 aa20.77■□□□□ 0.92
RAPGEF3-203ENST00000395360 KIAA1210Q9ULL0 1709 aa20.77■□□□□ 0.91
RAPGEF3-203ENST00000395360 MYOM2P54296 1465 aa20.76■□□□□ 0.91
RAPGEF3-203ENST00000395360 KNSTRNQ9Y448 316 aa20.76■□□□□ 0.91
RAPGEF3-203ENST00000395360 SALL2Q9Y467 1007 aaPredicted RBP20.76■□□□□ 0.91
RAPGEF3-203ENST00000395360 RNF123Q5XPI4 1314 aa20.75■□□□□ 0.91
RAPGEF3-203ENST00000395360 THEMISQ8N1K5 641 aaPredicted RBP20.75■□□□□ 0.91
RAPGEF3-203ENST00000395360 MYO5BQ9ULV0 1848 aa20.74■□□□□ 0.91
RAPGEF3-203ENST00000395360 TMEM2Q9UHN6 1383 aa20.71■□□□□ 0.91
RAPGEF3-203ENST00000395360 SLIT1O75093 1534 aa20.71■□□□□ 0.91
RAPGEF3-203ENST00000395360 NEXMIFQ5QGS0 1516 aa20.71■□□□□ 0.91
RAPGEF3-203ENST00000395360 IFT172Q9UG01 1749 aa20.71■□□□□ 0.91
RAPGEF3-203ENST00000395360 ARHGAP23Q9P227 1491 aa20.7■□□□□ 0.9
RAPGEF3-203ENST00000395360 PPLO60437 1756 aa20.7■□□□□ 0.9
RAPGEF3-203ENST00000395360 HDGFP51858 240 aaKnown RBP20.7■□□□□ 0.9
RAPGEF3-203ENST00000395360 AMER1Q5JTC6 1135 aaPredicted RBP20.7■□□□□ 0.9
RAPGEF3-203ENST00000395360 ZFYVE9O95405 1425 aa20.69■□□□□ 0.9
RAPGEF3-203ENST00000395360 RIMS2Q9UQ26 1411 aa20.69■□□□□ 0.9
RAPGEF3-203ENST00000395360 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.68■□□□□ 0.9
RAPGEF3-203ENST00000395360 NRXN1Q9ULB1 1477 aa20.67■□□□□ 0.9
RAPGEF3-203ENST00000395360 LMTK3Q96Q04 1460 aa20.67■□□□□ 0.9
RAPGEF3-203ENST00000395360 MYOM1P52179 1685 aa20.67■□□□□ 0.9
RAPGEF3-203ENST00000395360 VGFO15240 615 aaPredicted RBP20.66■□□□□ 0.9
RAPGEF3-203ENST00000395360 PPP2R1AP30153 589 aa20.66■□□□□ 0.9
RAPGEF3-203ENST00000395360 PDE3BQ13370 1112 aa20.66■□□□□ 0.9
RAPGEF3-203ENST00000395360 BLMP54132 1417 aaPredicted RBP20.66■□□□□ 0.9
RAPGEF3-203ENST00000395360 SLC24A1O60721 1099 aa20.65■□□□□ 0.9
RAPGEF3-203ENST00000395360 INSRP06213 1382 aa20.65■□□□□ 0.9
RAPGEF3-203ENST00000395360 EID1Q9Y6B2 187 aa20.64■□□□□ 0.89
RAPGEF3-203ENST00000395360 ASXL1Q8IXJ9 1541 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms