RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 KIF7Q2M1P5 1343 aa20.02■□□□□ 0.8
CDC42SE2-202ENST00000395246 NRXN3Q9Y4C0 1643 aa20.01■□□□□ 0.79
CDC42SE2-202ENST00000395246 QRICH2Q9H0J4 1663 aa20■□□□□ 0.79
CDC42SE2-202ENST00000395246 ASXL1Q8IXJ9 1541 aa19.99■□□□□ 0.79
CDC42SE2-202ENST00000395246 UBR1Q8IWV7 1749 aa19.99■□□□□ 0.79
CDC42SE2-202ENST00000395246 FAM69CQ0P6D2 419 aa19.99■□□□□ 0.79
CDC42SE2-202ENST00000395246 INSRP06213 1382 aa19.98■□□□□ 0.79
CDC42SE2-202ENST00000395246 DLC1Q96QB1 1528 aa19.97■□□□□ 0.79
CDC42SE2-202ENST00000395246 RAPGEF3O95398 923 aa19.97■□□□□ 0.79
CDC42SE2-202ENST00000395246 TESK2Q96S53 571 aa19.97■□□□□ 0.79
CDC42SE2-202ENST00000395246 DCAF11Q8TEB1 546 aa19.93■□□□□ 0.78
CDC42SE2-202ENST00000395246 WASHC2CQ9Y4E1 1318 aa19.93■□□□□ 0.78
CDC42SE2-202ENST00000395246 C3P01024 1663 aa19.92■□□□□ 0.78
CDC42SE2-202ENST00000395246 ZNF142P52746 1687 aaPredicted RBP19.91■□□□□ 0.78
CDC42SE2-202ENST00000395246 SLC52A1Q9NWF4 448 aa19.9■□□□□ 0.78
CDC42SE2-202ENST00000395246 NPC1L1Q9UHC9 1359 aa19.9■□□□□ 0.78
CDC42SE2-202ENST00000395246 FER1L4A9Z1Z3 1794 aa19.89■□□□□ 0.77
CDC42SE2-202ENST00000395246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.89■□□□□ 0.771e-6■■■□□ 18.6
CDC42SE2-202ENST00000395246 A2ML1A8K2U0 1454 aa19.89■□□□□ 0.77
CDC42SE2-202ENST00000395246 PUS7Q96PZ0 661 aaKnown RBP19.88■□□□□ 0.77
CDC42SE2-202ENST00000395246 SLC24A1O60721 1099 aa19.88■□□□□ 0.77
CDC42SE2-202ENST00000395246 DDX10Q13206 875 aaKnown RBP19.86■□□□□ 0.77
CDC42SE2-202ENST00000395246 ALKQ9UM73 1620 aa19.86■□□□□ 0.77
CDC42SE2-202ENST00000395246 CARD11Q9BXL7 1154 aa19.85■□□□□ 0.77
CDC42SE2-202ENST00000395246 EIF3AQ14152 1382 aaKnown RBP19.85■□□□□ 0.77
CDC42SE2-202ENST00000395246 ADAMTSL3P82987 1691 aa19.85■□□□□ 0.77
CDC42SE2-202ENST00000395246 SLIT1O75093 1534 aa19.84■□□□□ 0.77
CDC42SE2-202ENST00000395246 ANKRD26Q9UPS8 1709 aa19.84■□□□□ 0.77
CDC42SE2-202ENST00000395246 C14orf93Q9H972 538 aaKnown RBP19.84■□□□□ 0.77
CDC42SE2-202ENST00000395246 PARD3Q8TEW0 1356 aa19.83■□□□□ 0.77
CDC42SE2-202ENST00000395246 RIMS1Q86UR5 1692 aaKnown RBP19.83■□□□□ 0.76
CDC42SE2-202ENST00000395246 CPS1P31327 1500 aa19.82■□□□□ 0.76
CDC42SE2-202ENST00000395246 PTPRMP28827 1452 aa19.82■□□□□ 0.76
CDC42SE2-202ENST00000395246 NLRP1Q9C000 1473 aa19.82■□□□□ 0.76
CDC42SE2-202ENST00000395246 ADGRB2O60241 1585 aa19.82■□□□□ 0.76
CDC42SE2-202ENST00000395246 DISP3Q9P2K9 1392 aa19.81■□□□□ 0.76
CDC42SE2-202ENST00000395246 ARHGAP23Q9P227 1491 aa19.81■□□□□ 0.76
CDC42SE2-202ENST00000395246 NBPF1Q3BBV0 1214 aa19.81■□□□□ 0.76
CDC42SE2-202ENST00000395246 DIP2AQ14689 1571 aa19.81■□□□□ 0.76
CDC42SE2-202ENST00000395246 CFAP65Q6ZU64 1925 aaKnown RBP19.8■□□□□ 0.76
CDC42SE2-202ENST00000395246 PER1O15534 1290 aaPredicted RBP19.8■□□□□ 0.76
CDC42SE2-202ENST00000395246 PRKRIP1Q9H875 184 aaPredicted RBP19.79■□□□□ 0.76
CDC42SE2-202ENST00000395246 TECPR2O15040 1411 aa19.79■□□□□ 0.76
CDC42SE2-202ENST00000395246 MED14O60244 1454 aa19.79■□□□□ 0.76
CDC42SE2-202ENST00000395246 ST20-MTHFSA0A0A6YYL1 179 aa19.78■□□□□ 0.76
CDC42SE2-202ENST00000395246 TULP4Q9NRJ4 1543 aa19.77■□□□□ 0.76
CDC42SE2-202ENST00000395246 ANP32CO43423 234 aa19.77■□□□□ 0.76
CDC42SE2-202ENST00000395246 ADGRF5Q8IZF2 1346 aa19.76■□□□□ 0.75
CDC42SE2-202ENST00000395246 CENPBP07199 599 aaPredicted RBP19.76■□□□□ 0.75
CDC42SE2-202ENST00000395246 LRPPRCP42704 1394 aaKnown RBP19.76■□□□□ 0.75
CDC42SE2-202ENST00000395246 TOPAZ1Q8N9V7 1692 aa19.73■□□□□ 0.75
CDC42SE2-202ENST00000395246 HIRIP3Q9BW71 556 aaPredicted RBP19.72■□□□□ 0.75
CDC42SE2-202ENST00000395246 BRD4O60885 1362 aaPredicted RBP19.7■□□□□ 0.74
CDC42SE2-202ENST00000395246 ZMYM3Q14202 1370 aa19.7■□□□□ 0.74
CDC42SE2-202ENST00000395246 NINLQ9Y2I6 1382 aa19.68■□□□□ 0.74
CDC42SE2-202ENST00000395246 IDI1Q13907 227 aa19.68■□□□□ 0.74
CDC42SE2-202ENST00000395246 XRN1Q8IZH2 1706 aaKnown RBP19.68■□□□□ 0.74
CDC42SE2-202ENST00000395246 USP54Q70EL1 1684 aa19.68■□□□□ 0.74
CDC42SE2-202ENST00000395246 GGT6Q6P531 493 aa19.67■□□□□ 0.74
CDC42SE2-202ENST00000395246 AKAP12Q02952 1782 aa19.66■□□□□ 0.74
CDC42SE2-202ENST00000395246 VGFO15240 615 aaPredicted RBP19.66■□□□□ 0.74
CDC42SE2-202ENST00000395246 SIRT1Q96EB6 747 aa19.66■□□□□ 0.74
CDC42SE2-202ENST00000395246 RALBP1Q15311 655 aa19.66■□□□□ 0.74
CDC42SE2-202ENST00000395246 KDM2AQ9Y2K7 1162 aa19.66■□□□□ 0.74
CDC42SE2-202ENST00000395246 TMF1P82094 1093 aa19.65■□□□□ 0.74
CDC42SE2-202ENST00000395246 RGL3Q3MIN7 710 aa19.65■□□□□ 0.74
CDC42SE2-202ENST00000395246 FAM135BQ49AJ0 1406 aa19.65■□□□□ 0.74
CDC42SE2-202ENST00000395246 CDCA8Q53HL2 280 aa19.64■□□□□ 0.74
CDC42SE2-202ENST00000395246 MON2Q7Z3U7 1717 aa19.64■□□□□ 0.73
CDC42SE2-202ENST00000395246 SHPRHQ149N8 1683 aa19.64■□□□□ 0.73
CDC42SE2-202ENST00000395246 KIF20BQ96Q89 1820 aa19.62■□□□□ 0.73
CDC42SE2-202ENST00000395246 RIMS2Q9UQ26 1411 aa19.62■□□□□ 0.73
CDC42SE2-202ENST00000395246 NRKQ7Z2Y5 1582 aa19.62■□□□□ 0.73
CDC42SE2-202ENST00000395246 BLMP54132 1417 aaPredicted RBP19.62■□□□□ 0.73
CDC42SE2-202ENST00000395246 YTHDC2Q9H6S0 1430 aaKnown RBP19.62■□□□□ 0.73
CDC42SE2-202ENST00000395246 ABCC11Q96J66 1382 aa19.6■□□□□ 0.73
CDC42SE2-202ENST00000395246 CDC42BPGQ6DT37 1551 aa19.59■□□□□ 0.73
CDC42SE2-202ENST00000395246 TNRQ92752 1358 aa19.59■□□□□ 0.73
CDC42SE2-202ENST00000395246 CFAP70Q5T0N1 1121 aa19.58■□□□□ 0.73
CDC42SE2-202ENST00000395246 CD163L1Q9NR16 1453 aa19.58■□□□□ 0.73
CDC42SE2-202ENST00000395246 MYBBP1AQ9BQG0 1328 aaKnown RBP19.58■□□□□ 0.73
CDC42SE2-202ENST00000395246 CEP170BQ9Y4F5 1589 aaPredicted RBP19.57■□□□□ 0.72
CDC42SE2-202ENST00000395246 PLEKHG1Q9ULL1 1385 aa19.57■□□□□ 0.72
CDC42SE2-202ENST00000395246 ADAMTS13Q76LX8 1427 aa19.56■□□□□ 0.72
CDC42SE2-202ENST00000395246 TMEM2Q9UHN6 1383 aa19.55■□□□□ 0.72
CDC42SE2-202ENST00000395246 LRRC7Q96NW7 1537 aa19.54■□□□□ 0.72
CDC42SE2-202ENST00000395246 MYT1LQ9UL68 1186 aa19.54■□□□□ 0.72
CDC42SE2-202ENST00000395246 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
CDC42SE2-202ENST00000395246 AMER1Q5JTC6 1135 aaPredicted RBP19.53■□□□□ 0.72
CDC42SE2-202ENST00000395246 DNAJC5Q9H3Z4 198 aa19.53■□□□□ 0.72
CDC42SE2-202ENST00000395246 NSD2O96028 1365 aa19.53■□□□□ 0.72
CDC42SE2-202ENST00000395246 CENPJQ9HC77 1338 aaPredicted RBP19.53■□□□□ 0.72
CDC42SE2-202ENST00000395246 ATP7BP35670 1465 aa19.52■□□□□ 0.72
CDC42SE2-202ENST00000395246 NALCNQ8IZF0 1738 aa19.52■□□□□ 0.72
CDC42SE2-202ENST00000395246 CHD2O14647 1828 aaKnown RBP19.52■□□□□ 0.71
CDC42SE2-202ENST00000395246 ZNF326Q5BKZ1 582 aaKnown RBP19.52■□□□□ 0.71
CDC42SE2-202ENST00000395246 ITSN1Q15811 1721 aa19.52■□□□□ 0.71
CDC42SE2-202ENST00000395246 PTCH1Q13635 1447 aa19.51■□□□□ 0.71
CDC42SE2-202ENST00000395246 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.51■□□□□ 0.71
CDC42SE2-202ENST00000395246 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms