RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 NEXMIFQ5QGS0 1516 aa18.54■□□□□ 0.56
VPS26A-203ENST00000395098 PPLO60437 1756 aa18.54■□□□□ 0.56
VPS26A-203ENST00000395098 NRXN1Q9ULB1 1477 aa18.54■□□□□ 0.56
VPS26A-203ENST00000395098 USP47Q96K76 1375 aa18.54■□□□□ 0.56
VPS26A-203ENST00000395098 MYO5BQ9ULV0 1848 aa18.53■□□□□ 0.56
VPS26A-203ENST00000395098 DIEXFQ68CQ4 756 aaKnown RBP18.53■□□□□ 0.56
VPS26A-203ENST00000395098 GPRASP1Q5JY77 1395 aa18.53■□□□□ 0.56
VPS26A-203ENST00000395098 A2ML1A8K2U0 1454 aa18.52■□□□□ 0.55
VPS26A-203ENST00000395098 STAG3Q9UJ98 1225 aa18.51■□□□□ 0.55
VPS26A-203ENST00000395098 CFAP70Q5T0N1 1121 aa18.5■□□□□ 0.55
VPS26A-203ENST00000395098 ADAMTSL3P82987 1691 aa18.5■□□□□ 0.55
VPS26A-203ENST00000395098 PIK3C2GO75747 1445 aa18.49■□□□□ 0.55
VPS26A-203ENST00000395098 RIMS1Q86UR5 1692 aaKnown RBP18.49■□□□□ 0.55
VPS26A-203ENST00000395098 C11orf95C9JLR9 678 aaPredicted RBP18.48■□□□□ 0.55
VPS26A-203ENST00000395098 VGFO15240 615 aaPredicted RBP18.47■□□□□ 0.55
VPS26A-203ENST00000395098 SENP3Q9H4L4 574 aaPredicted RBP18.46■□□□□ 0.55
VPS26A-203ENST00000395098 LAMC1P11047 1609 aa18.46■□□□□ 0.55
VPS26A-203ENST00000395098 ST20-MTHFSA0A0A6YYL1 179 aa18.45■□□□□ 0.54
VPS26A-203ENST00000395098 ZFYVE9O95405 1425 aa18.45■□□□□ 0.54
VPS26A-203ENST00000395098 WASHC2AQ641Q2 1341 aa18.44■□□□□ 0.54
VPS26A-203ENST00000395098 C14orf93Q9H972 538 aaKnown RBP18.44■□□□□ 0.54
VPS26A-203ENST00000395098 NLRP1Q9C000 1473 aa18.44■□□□□ 0.54
VPS26A-203ENST00000395098 KIAA1210Q9ULL0 1709 aa18.44■□□□□ 0.54
VPS26A-203ENST00000395098 RIMS2Q9UQ26 1411 aa18.43■□□□□ 0.54
VPS26A-203ENST00000395098 DDX10Q13206 875 aaKnown RBP18.42■□□□□ 0.54
VPS26A-203ENST00000395098 UBR1Q8IWV7 1749 aa18.42■□□□□ 0.54
VPS26A-203ENST00000395098 TMEM132EQ6IEE7 984 aa18.39■□□□□ 0.54
VPS26A-203ENST00000395098 SCAF11Q99590 1463 aaKnown RBP18.39■□□□□ 0.53
VPS26A-203ENST00000395098 ADGRB1O14514 1584 aa18.39■□□□□ 0.53
VPS26A-203ENST00000395098 KDM5AP29375 1690 aaKnown RBP18.39■□□□□ 0.53
VPS26A-203ENST00000395098 IQGAP1P46940 1657 aa18.39■□□□□ 0.53
VPS26A-203ENST00000395098 TMEM2Q9UHN6 1383 aa18.38■□□□□ 0.53
VPS26A-203ENST00000395098 KIF7Q2M1P5 1343 aa18.38■□□□□ 0.53
VPS26A-203ENST00000395098 CCDC7Q96M83 1385 aa18.38■□□□□ 0.53
VPS26A-203ENST00000395098 MYO3AQ8NEV4 1616 aa18.38■□□□□ 0.53
VPS26A-203ENST00000395098 SETBP1Q9Y6X0 1596 aa18.37■□□□□ 0.53
VPS26A-203ENST00000395098 TESK2Q96S53 571 aa18.37■□□□□ 0.53
VPS26A-203ENST00000395098 PTPRMP28827 1452 aa18.35■□□□□ 0.53
VPS26A-203ENST00000395098 ASXL1Q8IXJ9 1541 aa18.34■□□□□ 0.53
VPS26A-203ENST00000395098 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.34■□□□□ 0.53
VPS26A-203ENST00000395098 LTKP29376 864 aa18.34■□□□□ 0.53
VPS26A-203ENST00000395098 ALKQ9UM73 1620 aa18.33■□□□□ 0.52
VPS26A-203ENST00000395098 TRAK1Q9UPV9 953 aa18.33■□□□□ 0.52
VPS26A-203ENST00000395098 CEP170BQ9Y4F5 1589 aaPredicted RBP18.32■□□□□ 0.52
VPS26A-203ENST00000395098 MIER1Q8N108 512 aa18.31■□□□□ 0.52
VPS26A-203ENST00000395098 NRXN3Q9Y4C0 1643 aa18.31■□□□□ 0.52
VPS26A-203ENST00000395098 ARHGAP23Q9P227 1491 aa18.31■□□□□ 0.52
VPS26A-203ENST00000395098 DISP3Q9P2K9 1392 aa18.31■□□□□ 0.52
VPS26A-203ENST00000395098 SLIT1O75093 1534 aa18.3■□□□□ 0.52
VPS26A-203ENST00000395098 HDGFP51858 240 aaKnown RBP18.3■□□□□ 0.52
VPS26A-203ENST00000395098 THEMISQ8N1K5 641 aaPredicted RBP18.3■□□□□ 0.52
VPS26A-203ENST00000395098 POLR3GLQ9BT43 218 aa18.3■□□□□ 0.52
VPS26A-203ENST00000395098 POLR1AO95602 1720 aaPredicted RBP18.3■□□□□ 0.52
VPS26A-203ENST00000395098 EIF3AQ14152 1382 aaKnown RBP18.3■□□□□ 0.52
VPS26A-203ENST00000395098 TXNDC2Q86VQ3 553 aa18.3■□□□□ 0.52
VPS26A-203ENST00000395098 STK26Q9P289 416 aa18.27■□□□□ 0.52
VPS26A-203ENST00000395098 SETD1AO15047 1707 aaKnown RBP18.27■□□□□ 0.51
VPS26A-203ENST00000395098 KDM4FA0A1W2PPD8 638 aa18.26■□□□□ 0.51
VPS26A-203ENST00000395098 YTHDC2Q9H6S0 1430 aaKnown RBP18.26■□□□□ 0.51
VPS26A-203ENST00000395098 EID1Q9Y6B2 187 aa18.26■□□□□ 0.51
VPS26A-203ENST00000395098 METP08581 1390 aa18.26■□□□□ 0.51
VPS26A-203ENST00000395098 PLEKHG1Q9ULL1 1385 aa18.26■□□□□ 0.51
VPS26A-203ENST00000395098 ZNF142P52746 1687 aaPredicted RBP18.25■□□□□ 0.51
VPS26A-203ENST00000395098 CENPJQ9HC77 1338 aaPredicted RBP18.25■□□□□ 0.51
VPS26A-203ENST00000395098 TMF1P82094 1093 aa18.25■□□□□ 0.51
VPS26A-203ENST00000395098 BCANQ96GW7 911 aa18.25■□□□□ 0.51
VPS26A-203ENST00000395098 ADAMTS13Q76LX8 1427 aa18.24■□□□□ 0.51
VPS26A-203ENST00000395098 SETD1BQ9UPS6 1966 aaKnown RBP18.24■□□□□ 0.51
VPS26A-203ENST00000395098 ARHGEF28Q8N1W1 1705 aaKnown RBP18.23■□□□□ 0.51
VPS26A-203ENST00000395098 SLC26A8Q96RN1 970 aa18.21■□□□□ 0.51
VPS26A-203ENST00000395098 LRPPRCP42704 1394 aaKnown RBP18.2■□□□□ 0.5
VPS26A-203ENST00000395098 SBNO2Q9Y2G9 1366 aa18.2■□□□□ 0.5
VPS26A-203ENST00000395098 SAFB2Q14151 953 aaKnown RBP eCLIP18.2■□□□□ 0.5
VPS26A-203ENST00000395098 MED14O60244 1454 aa18.19■□□□□ 0.5
VPS26A-203ENST00000395098 QRICH2Q9H0J4 1663 aa18.19■□□□□ 0.5
VPS26A-203ENST00000395098 PRAM1Q96QH2 718 aa18.18■□□□□ 0.5
VPS26A-203ENST00000395098 ABCC11Q96J66 1382 aa18.17■□□□□ 0.5
VPS26A-203ENST00000395098 ANKLE2Q86XL3 938 aa18.16■□□□□ 0.5
VPS26A-203ENST00000395098 PLEKHH1Q9ULM0 1364 aa18.15■□□□□ 0.5
VPS26A-203ENST00000395098 WAPLQ7Z5K2 1190 aa18.15■□□□□ 0.5
VPS26A-203ENST00000395098 DLC1Q96QB1 1528 aa18.14■□□□□ 0.5
VPS26A-203ENST00000395098 POGKQ9P215 609 aa18.14■□□□□ 0.49
VPS26A-203ENST00000395098 TBX22Q9Y458 520 aa18.14■□□□□ 0.49
VPS26A-203ENST00000395098 PTPRUQ92729 1446 aa18.14■□□□□ 0.49
VPS26A-203ENST00000395098 CDCA8Q53HL2 280 aa18.13■□□□□ 0.49
VPS26A-203ENST00000395098 SLC24A1O60721 1099 aa18.13■□□□□ 0.49
VPS26A-203ENST00000395098 TULP4Q9NRJ4 1543 aa18.12■□□□□ 0.49
VPS26A-203ENST00000395098 ANP32CO43423 234 aa18.12■□□□□ 0.49
VPS26A-203ENST00000395098 MINK1Q8N4C8 1332 aaPredicted RBP18.12■□□□□ 0.49
VPS26A-203ENST00000395098 TECPR2O15040 1411 aa18.12■□□□□ 0.49
VPS26A-203ENST00000395098 ROBO2Q9HCK4 1378 aa18.1■□□□□ 0.49
VPS26A-203ENST00000395098 NCKAP5LQ9HCH0 1330 aa18.1■□□□□ 0.49
VPS26A-203ENST00000395098 PANK3Q9H999 370 aa18.1■□□□□ 0.49
VPS26A-203ENST00000395098 DIP2AQ14689 1571 aa18.09■□□□□ 0.49
VPS26A-203ENST00000395098 CPS1P31327 1500 aa18.09■□□□□ 0.49
VPS26A-203ENST00000395098 KNDC1Q76NI1 1749 aa18.09■□□□□ 0.49
VPS26A-203ENST00000395098 EVC2Q86UK5 1308 aa18.09■□□□□ 0.49
VPS26A-203ENST00000395098 MYOM1P52179 1685 aa18.08■□□□□ 0.49
VPS26A-203ENST00000395098 AMOTL2Q9Y2J4 779 aa18.08■□□□□ 0.49
VPS26A-203ENST00000395098 PER1O15534 1290 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms