RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 ZMYND15Q9H091 742 aa8.15□□□□□ -1.1
NXF3-201ENST00000395065 NLRP1Q9C000 1473 aa8.15□□□□□ -1.1
NXF3-201ENST00000395065 SHROOM2Q13796 1616 aa8.15□□□□□ -1.1
NXF3-201ENST00000395065 TRMT2AQ8IZ69 625 aaKnown RBP8.15□□□□□ -1.11
NXF3-201ENST00000395065 SAMD9LQ8IVG5 1584 aa8.14□□□□□ -1.11
NXF3-201ENST00000395065 GPRASP1Q5JY77 1395 aa8.14□□□□□ -1.11
NXF3-201ENST00000395065 LAMC1P11047 1609 aa8.14□□□□□ -1.11
NXF3-201ENST00000395065 TRPM1Q7Z4N2 1603 aa8.14□□□□□ -1.11
NXF3-201ENST00000395065 COL17A1Q9UMD9 1497 aaPredicted RBP8.14□□□□□ -1.11
NXF3-201ENST00000395065 XRCC6P12956 609 aaKnown RBP eCLIP8.14□□□□□ -1.11
NXF3-201ENST00000395065 BECN1Q14457 450 aa8.14□□□□□ -1.11
NXF3-201ENST00000395065 CNKSR2Q8WXI2 1034 aa8.14□□□□□ -1.11
NXF3-201ENST00000395065 ARHGEF5Q12774 1597 aa8.14□□□□□ -1.11
NXF3-201ENST00000395065 PLEKHH1Q9ULM0 1364 aa8.14□□□□□ -1.11
NXF3-201ENST00000395065 ZMYM3Q14202 1370 aa8.13□□□□□ -1.11
NXF3-201ENST00000395065 PTPRGP23470 1445 aa8.13□□□□□ -1.11
NXF3-201ENST00000395065 RGS3P49796 1198 aa8.13□□□□□ -1.11
NXF3-201ENST00000395065 HSP90AA2PQ14568 343 aaPredicted RBP8.13□□□□□ -1.11
NXF3-201ENST00000395065 PNNQ9H307 717 aaKnown RBP8.13□□□□□ -1.11
NXF3-201ENST00000395065 ADAMTS8Q9UP79 889 aa8.13□□□□□ -1.11
NXF3-201ENST00000395065 NUP155O75694 1391 aa8.13□□□□□ -1.11
NXF3-201ENST00000395065 TTC37Q6PGP7 1564 aa8.12□□□□□ -1.11
NXF3-201ENST00000395065 SLFN5Q08AF3 891 aa8.12□□□□□ -1.11
NXF3-201ENST00000395065 VSIG10Q8N0Z9 540 aa8.12□□□□□ -1.11
NXF3-201ENST00000395065 PRAG1Q86YV5 1406 aa8.12□□□□□ -1.11
NXF3-201ENST00000395065 HSP90AA1P07900 732 aaKnown RBP8.11□□□□□ -1.11
NXF3-201ENST00000395065 HNRNPMP52272 730 aaKnown RBP eCLIP8.11□□□□□ -1.11
NXF3-201ENST00000395065 GOLGA2Q08379 1002 aa8.11□□□□□ -1.11
NXF3-201ENST00000395065 TESK2Q96S53 571 aa8.11□□□□□ -1.11
NXF3-201ENST00000395065 MAPK8IP3Q9UPT6 1336 aa8.11□□□□□ -1.11
NXF3-201ENST00000395065 GOLGA6L3A6NEY3 463 aa8.11□□□□□ -1.11
NXF3-201ENST00000395065 SEC24BO95487 1268 aa8.11□□□□□ -1.11
NXF3-201ENST00000395065 PRDM15P57071 1507 aaPredicted RBP8.11□□□□□ -1.11
NXF3-201ENST00000395065 CCDC141Q6ZP82 1450 aa8.11□□□□□ -1.11
NXF3-201ENST00000395065 SYCP2Q9BX26 1530 aa8.11□□□□□ -1.11
NXF3-201ENST00000395065 MYO5CQ9NQX4 1742 aa8.1□□□□□ -1.11
NXF3-201ENST00000395065 CCDC144AA2RUR9 1427 aa8.1□□□□□ -1.11
NXF3-201ENST00000395065 IGHDP01880 384 aa8.1□□□□□ -1.11
NXF3-201ENST00000395065 TSPY4P0CV99 314 aa8.09□□□□□ -1.11
NXF3-201ENST00000395065 TSPY10P0CW01 314 aa8.09□□□□□ -1.11
NXF3-201ENST00000395065 MCM4P33991 863 aa8.09□□□□□ -1.11
NXF3-201ENST00000395065 CC2D1BQ5T0F9 858 aaKnown RBP8.09□□□□□ -1.11
NXF3-201ENST00000395065 NAP1L5Q96NT1 182 aaPredicted RBP8.09□□□□□ -1.11
NXF3-201ENST00000395065 PANK3Q9H999 370 aa8.09□□□□□ -1.11
NXF3-201ENST00000395065 ISY1Q9ULR0 285 aaKnown RBP8.09□□□□□ -1.11
NXF3-201ENST00000395065 DISP3Q9P2K9 1392 aa8.09□□□□□ -1.11
NXF3-201ENST00000395065 CENPJQ9HC77 1338 aaPredicted RBP8.09□□□□□ -1.11
NXF3-201ENST00000395065 MRE11P49959 708 aa8.09□□□□□ -1.11
NXF3-201ENST00000395065 PDE3AQ14432 1141 aa8.09□□□□□ -1.11
NXF3-201ENST00000395065 TBC1D32Q96NH3 1257 aa8.09□□□□□ -1.11
NXF3-201ENST00000395065 SLKQ9H2G2 1235 aaPredicted RBP8.09□□□□□ -1.11
NXF3-201ENST00000395065 KDM2AQ9Y2K7 1162 aa8.09□□□□□ -1.11
NXF3-201ENST00000395065 ARHGAP5Q13017 1502 aa8.08□□□□□ -1.12
NXF3-201ENST00000395065 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.08□□□□□ -1.12
NXF3-201ENST00000395065 FAM135AQ9P2D6 1515 aa8.08□□□□□ -1.12
NXF3-201ENST00000395065 NKTRP30414 1462 aaKnown RBP8.08□□□□□ -1.12
NXF3-201ENST00000395065 NINLQ9Y2I6 1382 aa8.08□□□□□ -1.12
NXF3-201ENST00000395065 CGNL1Q0VF96 1302 aa8.08□□□□□ -1.12
NXF3-201ENST00000395065 TBC1D2Q9BYX2 928 aa8.08□□□□□ -1.12
NXF3-201ENST00000395065 UNC13BO14795 1591 aa8.07□□□□□ -1.12
NXF3-201ENST00000395065 PANK2Q9BZ23 570 aa8.07□□□□□ -1.12
NXF3-201ENST00000395065 ERBINQ96RT1 1412 aa8.07□□□□□ -1.12
NXF3-201ENST00000395065 MAST1Q9Y2H9 1570 aa8.07□□□□□ -1.12
NXF3-201ENST00000395065 ABCC2Q92887 1545 aa8.07□□□□□ -1.12
NXF3-201ENST00000395065 PPP2R1AP30153 589 aa8.07□□□□□ -1.12
NXF3-201ENST00000395065 AAMPQ13685 434 aa8.07□□□□□ -1.12
NXF3-201ENST00000395065 NBPF1Q3BBV0 1214 aa8.07□□□□□ -1.12
NXF3-201ENST00000395065 PIK3C2GO75747 1445 aa8.07□□□□□ -1.12
NXF3-201ENST00000395065 ESPNB1AK53 854 aa8.06□□□□□ -1.12
NXF3-201ENST00000395065 NGEFQ8N5V2 710 aa8.06□□□□□ -1.12
NXF3-201ENST00000395065 MAGI2Q86UL8 1455 aa8.06□□□□□ -1.12
NXF3-201ENST00000395065 WDR7Q9Y4E6 1490 aa8.06□□□□□ -1.12
NXF3-201ENST00000395065 CLUAP1Q96AJ1 413 aa8.05□□□□□ -1.12
NXF3-201ENST00000395065 PLXNC1O60486 1568 aa8.05□□□□□ -1.12
NXF3-201ENST00000395065 NPC1L1Q9UHC9 1359 aa8.05□□□□□ -1.12
NXF3-201ENST00000395065 ZCCHC11Q5TAX3 1644 aaKnown RBP8.05□□□□□ -1.12
NXF3-201ENST00000395065 TRAK2O60296 914 aa8.05□□□□□ -1.12
NXF3-201ENST00000395065 BCAR3O75815 825 aa8.05□□□□□ -1.12
NXF3-201ENST00000395065 TPM2P07951 284 aa8.05□□□□□ -1.12
NXF3-201ENST00000395065 TMF1P82094 1093 aa8.05□□□□□ -1.12
NXF3-201ENST00000395065 WDR43Q15061 677 aaKnown RBP eCLIP8.05□□□□□ -1.12
NXF3-201ENST00000395065 PDCL3Q9H2J4 239 aa8.05□□□□□ -1.12
NXF3-201ENST00000395065 MYH16Q9H6N6 1097 aa8.05□□□□□ -1.12
NXF3-201ENST00000395065 SPINK5Q9NQ38 1064 aaPredicted RBP8.05□□□□□ -1.12
NXF3-201ENST00000395065 CHMP5Q9NZZ3 219 aa8.05□□□□□ -1.12
NXF3-201ENST00000395065 IQGAP3Q86VI3 1631 aa8.04□□□□□ -1.12
NXF3-201ENST00000395065 EIF2AK4Q9P2K8 1649 aaKnown RBP8.04□□□□□ -1.12
NXF3-201ENST00000395065 E9PSI1 815 aa8.04□□□□□ -1.12
NXF3-201ENST00000395065 UPF2Q9HAU5 1272 aaKnown RBP8.04□□□□□ -1.12
NXF3-201ENST00000395065 GRPEL1Q9HAV7 217 aa8.04□□□□□ -1.12
NXF3-201ENST00000395065 A2MP01023 1474 aa8.04□□□□□ -1.12
NXF3-201ENST00000395065 ERBB4Q15303 1308 aa8.04□□□□□ -1.12
NXF3-201ENST00000395065 RTEL1-TNFRSF6BF6WH68 1400 aa8.03□□□□□ -1.12
NXF3-201ENST00000395065 FAM69CQ0P6D2 419 aa8.03□□□□□ -1.12
NXF3-201ENST00000395065 PMFBP1Q8TBY8 1022 aa8.03□□□□□ -1.12
NXF3-201ENST00000395065 ZNF692Q9BU19 519 aaPredicted RBP8.03□□□□□ -1.12
NXF3-201ENST00000395065 RNF17Q9BXT8 1623 aaKnown RBP8.02□□□□□ -1.12
NXF3-201ENST00000395065 PLA2R1Q13018 1463 aa8.02□□□□□ -1.13
NXF3-201ENST00000395065 DDIT3P35638 169 aa8.02□□□□□ -1.13
NXF3-201ENST00000395065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms