RNA–Protein interactions for RNA: ENST00000394939.3

GTF2IRD2B-201, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-201ENST00000394939 RPGRIP1LQ68CZ1 1315 aa17.51■□□□□ 0.39
GTF2IRD2B-201ENST00000394939 SPATA31E1Q6ZUB1 1445 aa17.51■□□□□ 0.39
GTF2IRD2B-201ENST00000394939 RGL3Q3MIN7 710 aa17.5■□□□□ 0.39
GTF2IRD2B-201ENST00000394939 TONSLQ96HA7 1378 aa17.5■□□□□ 0.39
GTF2IRD2B-201ENST00000394939 MYO5BQ9ULV0 1848 aa17.49■□□□□ 0.39
GTF2IRD2B-201ENST00000394939 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.48■□□□□ 0.39
GTF2IRD2B-201ENST00000394939 STAC3Q96MF2 364 aa17.48■□□□□ 0.39
GTF2IRD2B-201ENST00000394939 EID1Q9Y6B2 187 aa17.48■□□□□ 0.39
GTF2IRD2B-201ENST00000394939 TMEM2Q9UHN6 1383 aa17.48■□□□□ 0.39
GTF2IRD2B-201ENST00000394939 LMTK3Q96Q04 1460 aa17.48■□□□□ 0.39
GTF2IRD2B-201ENST00000394939 TIMELESSQ9UNS1 1208 aa17.47■□□□□ 0.39
GTF2IRD2B-201ENST00000394939 PPP1R15AO75807 674 aaPredicted RBP17.46■□□□□ 0.39
GTF2IRD2B-201ENST00000394939 SLIT1O75093 1534 aa17.46■□□□□ 0.39
GTF2IRD2B-201ENST00000394939 RIMS2Q9UQ26 1411 aa17.46■□□□□ 0.39
GTF2IRD2B-201ENST00000394939 ARHGAP23Q9P227 1491 aa17.44■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 VGFO15240 615 aaPredicted RBP17.44■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 ANKLE2Q86XL3 938 aa17.44■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 TXNDC2Q86VQ3 553 aa17.43■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 DCAF11Q8TEB1 546 aa17.43■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 FBXO41Q8TF61 875 aa17.43■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 ZFYVE9O95405 1425 aa17.43■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 NEXMIFQ5QGS0 1516 aa17.42■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 L3MBTL2Q969R5 705 aa17.42■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 PPLO60437 1756 aa17.42■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 SCAF11Q99590 1463 aaKnown RBP17.42■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 CACNB1Q02641 598 aaPredicted RBP17.41■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 MYOM2P54296 1465 aa17.4■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 HSPA2P54652 639 aa17.4■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 KDM2AQ9Y2K7 1162 aa17.4■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 IFT172Q9UG01 1749 aa17.4■□□□□ 0.38
GTF2IRD2B-201ENST00000394939 LTKP29376 864 aa17.38■□□□□ 0.37
GTF2IRD2B-201ENST00000394939 POLR1AO95602 1720 aaPredicted RBP17.38■□□□□ 0.37
GTF2IRD2B-201ENST00000394939 NUTM2DQ5VT03 806 aaPredicted RBP17.37■□□□□ 0.37
GTF2IRD2B-201ENST00000394939 BCANQ96GW7 911 aa17.37■□□□□ 0.37
GTF2IRD2B-201ENST00000394939 PLEKHG1Q9ULL1 1385 aa17.37■□□□□ 0.37
GTF2IRD2B-201ENST00000394939 ZEB1P37275 1124 aaPredicted RBP17.36■□□□□ 0.37
GTF2IRD2B-201ENST00000394939 ADGRF5Q8IZF2 1346 aa17.34■□□□□ 0.37
GTF2IRD2B-201ENST00000394939 NCKAP5LQ9HCH0 1330 aa17.34■□□□□ 0.37
GTF2IRD2B-201ENST00000394939 MED14O60244 1454 aa17.33■□□□□ 0.37
GTF2IRD2B-201ENST00000394939 NRXN1Q9ULB1 1477 aa17.33■□□□□ 0.37
GTF2IRD2B-201ENST00000394939 NPHP4O75161 1426 aaPredicted RBP17.33■□□□□ 0.36
GTF2IRD2B-201ENST00000394939 PRAG1Q86YV5 1406 aa17.32■□□□□ 0.36
GTF2IRD2B-201ENST00000394939 SETBP1Q9Y6X0 1596 aa17.32■□□□□ 0.36
GTF2IRD2B-201ENST00000394939 PIK3C2GO75747 1445 aa17.31■□□□□ 0.36
GTF2IRD2B-201ENST00000394939 IQGAP1P46940 1657 aa17.31■□□□□ 0.36
GTF2IRD2B-201ENST00000394939 LAMC1P11047 1609 aa17.29■□□□□ 0.36
GTF2IRD2B-201ENST00000394939 DIP2AQ14689 1571 aa17.29■□□□□ 0.36
GTF2IRD2B-201ENST00000394939 STRCQ7RTU9 1775 aa17.29■□□□□ 0.36
GTF2IRD2B-201ENST00000394939 C14orf93Q9H972 538 aaKnown RBP17.27■□□□□ 0.36
GTF2IRD2B-201ENST00000394939 TBX22Q9Y458 520 aa17.27■□□□□ 0.36
GTF2IRD2B-201ENST00000394939 KIAA1210Q9ULL0 1709 aa17.27■□□□□ 0.35
GTF2IRD2B-201ENST00000394939 ALKQ9UM73 1620 aa17.26■□□□□ 0.35
GTF2IRD2B-201ENST00000394939 NRXN3Q9Y4C0 1643 aa17.25■□□□□ 0.35
GTF2IRD2B-201ENST00000394939 ADAMTS13Q76LX8 1427 aa17.25■□□□□ 0.35
GTF2IRD2B-201ENST00000394939 CFAP70Q5T0N1 1121 aa17.25■□□□□ 0.35
GTF2IRD2B-201ENST00000394939 SLC26A8Q96RN1 970 aa17.25■□□□□ 0.35
GTF2IRD2B-201ENST00000394939 PIK3R4Q99570 1358 aa17.24■□□□□ 0.35
GTF2IRD2B-201ENST00000394939 NBPF8Q3BBV2 869 aa17.23■□□□□ 0.35
GTF2IRD2B-201ENST00000394939 TRPM1Q7Z4N2 1603 aa17.22■□□□□ 0.35
GTF2IRD2B-201ENST00000394939 ROCK2O75116 1388 aaKnown RBP17.22■□□□□ 0.35
GTF2IRD2B-201ENST00000394939 RALGAPBQ86X10 1494 aa17.22■□□□□ 0.35
GTF2IRD2B-201ENST00000394939 SETD1AO15047 1707 aaKnown RBP17.2■□□□□ 0.34
GTF2IRD2B-201ENST00000394939 METP08581 1390 aa17.18■□□□□ 0.34
GTF2IRD2B-201ENST00000394939 DCAF8L1A6NGE4 600 aa17.18■□□□□ 0.34
GTF2IRD2B-201ENST00000394939 GPRASP1Q5JY77 1395 aa17.17■□□□□ 0.34
GTF2IRD2B-201ENST00000394939 NBPF1Q3BBV0 1214 aa17.17■□□□□ 0.34
GTF2IRD2B-201ENST00000394939 TMEM132EQ6IEE7 984 aa17.17■□□□□ 0.34
GTF2IRD2B-201ENST00000394939 CARD11Q9BXL7 1154 aa17.17■□□□□ 0.34
GTF2IRD2B-201ENST00000394939 LRPPRCP42704 1394 aaKnown RBP17.16■□□□□ 0.34
GTF2IRD2B-201ENST00000394939 ADGRB1O14514 1584 aa17.16■□□□□ 0.34
GTF2IRD2B-201ENST00000394939 YTHDC2Q9H6S0 1430 aaKnown RBP17.16■□□□□ 0.34
GTF2IRD2B-201ENST00000394939 KCNA6P17658 529 aa17.16■□□□□ 0.34
GTF2IRD2B-201ENST00000394939 ASXL1Q8IXJ9 1541 aa17.15■□□□□ 0.34
GTF2IRD2B-201ENST00000394939 EIF3AQ14152 1382 aaKnown RBP17.15■□□□□ 0.34
GTF2IRD2B-201ENST00000394939 CHD2O14647 1828 aaKnown RBP17.14■□□□□ 0.34
GTF2IRD2B-201ENST00000394939 STK26Q9P289 416 aa17.14■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 AMOTL2Q9Y2J4 779 aa17.14■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 ABCC11Q96J66 1382 aa17.14■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 PPP4R3CPQ6ZMV5 832 aa17.13■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 NWD1Q149M9 1564 aa17.12■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 HOXD11P31277 338 aaPredicted RBP17.12■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 TECPR2O15040 1411 aa17.12■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 PTPRUQ92729 1446 aa17.12■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 NKTRP30414 1462 aaKnown RBP17.12■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 KNDC1Q76NI1 1749 aa17.11■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 XRN1Q8IZH2 1706 aaKnown RBP17.11■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 TRAK1Q9UPV9 953 aa17.11■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 PTCH1Q13635 1447 aa17.11■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 DLC1Q96QB1 1528 aa17.11■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 SIRT1Q96EB6 747 aa17.1■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 POGKQ9P215 609 aa17.09■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 CPS1P31327 1500 aa17.09■□□□□ 0.33
GTF2IRD2B-201ENST00000394939 FAM135BQ49AJ0 1406 aa17.08■□□□□ 0.32
GTF2IRD2B-201ENST00000394939 USP47Q96K76 1375 aa17.07■□□□□ 0.32
GTF2IRD2B-201ENST00000394939 EIF4G2P78344 907 aaKnown RBP eCLIP17.07■□□□□ 0.32
GTF2IRD2B-201ENST00000394939 PROSER2Q86WR7 435 aaPredicted RBP17.07■□□□□ 0.32
GTF2IRD2B-201ENST00000394939 ARHGEF28Q8N1W1 1705 aaKnown RBP17.06■□□□□ 0.32
GTF2IRD2B-201ENST00000394939 ROBO2Q9HCK4 1378 aa17.05■□□□□ 0.32
GTF2IRD2B-201ENST00000394939 CENPJQ9HC77 1338 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms