RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 SPATA31D1Q6ZQQ2 1576 aa23.86■■□□□ 1.41
SLC6A4-202ENST00000394821 PLPPR3Q6T4P5 718 aa23.85■■□□□ 1.41
SLC6A4-202ENST00000394821 PPLO60437 1756 aa23.84■■□□□ 1.41
SLC6A4-202ENST00000394821 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
SLC6A4-202ENST00000394821 TMEM131LA2VDJ0 1609 aa23.83■■□□□ 1.41
SLC6A4-202ENST00000394821 FER1L4A9Z1Z3 1794 aa23.81■■□□□ 1.4
SLC6A4-202ENST00000394821 MYOM2P54296 1465 aa23.8■■□□□ 1.4
SLC6A4-202ENST00000394821 CFAP70Q5T0N1 1121 aa23.8■■□□□ 1.4
SLC6A4-202ENST00000394821 WASHC2AQ641Q2 1341 aa23.8■■□□□ 1.4
SLC6A4-202ENST00000394821 NEXMIFQ5QGS0 1516 aa23.79■■□□□ 1.4
SLC6A4-202ENST00000394821 ST20-MTHFSA0A0A6YYL1 179 aa23.78■■□□□ 1.4
SLC6A4-202ENST00000394821 GPRASP1Q5JY77 1395 aa23.78■■□□□ 1.4
SLC6A4-202ENST00000394821 C3P01024 1663 aa23.77■■□□□ 1.4
SLC6A4-202ENST00000394821 NRXN1Q9ULB1 1477 aa23.76■■□□□ 1.39
SLC6A4-202ENST00000394821 STAC3Q96MF2 364 aa23.75■■□□□ 1.39
SLC6A4-202ENST00000394821 STAG3Q9UJ98 1225 aa23.74■■□□□ 1.39
SLC6A4-202ENST00000394821 RPGRIP1LQ68CZ1 1315 aa23.74■■□□□ 1.39
SLC6A4-202ENST00000394821 TNRQ92752 1358 aa23.73■■□□□ 1.39
SLC6A4-202ENST00000394821 A2ML1A8K2U0 1454 aa23.72■■□□□ 1.39
SLC6A4-202ENST00000394821 LAMC1P11047 1609 aa23.71■■□□□ 1.39
SLC6A4-202ENST00000394821 PIK3C2GO75747 1445 aa23.71■■□□□ 1.39
SLC6A4-202ENST00000394821 KIF7Q2M1P5 1343 aa23.7■■□□□ 1.38
SLC6A4-202ENST00000394821 CCDC7Q96M83 1385 aa23.69■■□□□ 1.38
SLC6A4-202ENST00000394821 KIAA1210Q9ULL0 1709 aa23.69■■□□□ 1.38
SLC6A4-202ENST00000394821 RIMS1Q86UR5 1692 aaKnown RBP23.69■■□□□ 1.38
SLC6A4-202ENST00000394821 GTF3C3Q9Y5Q9 886 aa23.68■■□□□ 1.38
SLC6A4-202ENST00000394821 IQGAP1P46940 1657 aa23.67■■□□□ 1.38
SLC6A4-202ENST00000394821 VGFO15240 615 aaPredicted RBP23.67■■□□□ 1.38
SLC6A4-202ENST00000394821 ANP32CO43423 234 aa23.67■■□□□ 1.38
SLC6A4-202ENST00000394821 TMEM132EQ6IEE7 984 aa23.67■■□□□ 1.38
SLC6A4-202ENST00000394821 POLR3GLQ9BT43 218 aa23.66■■□□□ 1.38
SLC6A4-202ENST00000394821 C14orf93Q9H972 538 aaKnown RBP23.66■■□□□ 1.38
SLC6A4-202ENST00000394821 POLR1AO95602 1720 aaPredicted RBP23.65■■□□□ 1.38
SLC6A4-202ENST00000394821 ADAMTSL3P82987 1691 aa23.64■■□□□ 1.38
SLC6A4-202ENST00000394821 TESK2Q96S53 571 aa23.64■■□□□ 1.37
SLC6A4-202ENST00000394821 UBR1Q8IWV7 1749 aa23.62■■□□□ 1.37
SLC6A4-202ENST00000394821 SCAF11Q99590 1463 aaKnown RBP23.62■■□□□ 1.37
SLC6A4-202ENST00000394821 RIMS2Q9UQ26 1411 aa23.62■■□□□ 1.37
SLC6A4-202ENST00000394821 CCER2I3L3R5 266 aa23.61■■□□□ 1.37
SLC6A4-202ENST00000394821 ZFYVE9O95405 1425 aa23.61■■□□□ 1.37
SLC6A4-202ENST00000394821 ADGRB1O14514 1584 aa23.6■■□□□ 1.37
SLC6A4-202ENST00000394821 TRAK1Q9UPV9 953 aa23.58■■□□□ 1.36
SLC6A4-202ENST00000394821 DISP3Q9P2K9 1392 aa23.57■■□□□ 1.36
SLC6A4-202ENST00000394821 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
SLC6A4-202ENST00000394821 ASXL1Q8IXJ9 1541 aa23.55■■□□□ 1.36
SLC6A4-202ENST00000394821 NLRP1Q9C000 1473 aa23.55■■□□□ 1.36
SLC6A4-202ENST00000394821 MYO3AQ8NEV4 1616 aa23.53■■□□□ 1.36
SLC6A4-202ENST00000394821 TMEM2Q9UHN6 1383 aa23.53■■□□□ 1.36
SLC6A4-202ENST00000394821 ALKQ9UM73 1620 aa23.52■■□□□ 1.36
SLC6A4-202ENST00000394821 KDM5AP29375 1690 aaKnown RBP23.52■■□□□ 1.36
SLC6A4-202ENST00000394821 LTKP29376 864 aa23.51■■□□□ 1.35
SLC6A4-202ENST00000394821 STK26Q9P289 416 aa23.51■■□□□ 1.35
SLC6A4-202ENST00000394821 PTPRMP28827 1452 aa23.51■■□□□ 1.35
SLC6A4-202ENST00000394821 NRXN3Q9Y4C0 1643 aa23.5■■□□□ 1.35
SLC6A4-202ENST00000394821 EIF3AQ14152 1382 aaKnown RBP23.47■■□□□ 1.35
SLC6A4-202ENST00000394821 SETD1AO15047 1707 aaKnown RBP23.47■■□□□ 1.35
SLC6A4-202ENST00000394821 TMF1P82094 1093 aa23.46■■□□□ 1.35
SLC6A4-202ENST00000394821 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.45■■□□□ 1.35
SLC6A4-202ENST00000394821 ARHGEF28Q8N1W1 1705 aaKnown RBP23.45■■□□□ 1.34
SLC6A4-202ENST00000394821 TXNDC2Q86VQ3 553 aa23.44■■□□□ 1.34
SLC6A4-202ENST00000394821 SAFB2Q14151 953 aaKnown RBP eCLIP23.44■■□□□ 1.34
SLC6A4-202ENST00000394821 CEP170BQ9Y4F5 1589 aaPredicted RBP23.43■■□□□ 1.34
SLC6A4-202ENST00000394821 CENPJQ9HC77 1338 aaPredicted RBP23.43■■□□□ 1.34
SLC6A4-202ENST00000394821 BCANQ96GW7 911 aa23.43■■□□□ 1.34
SLC6A4-202ENST00000394821 METP08581 1390 aa23.42■■□□□ 1.34
SLC6A4-202ENST00000394821 QRICH2Q9H0J4 1663 aa23.42■■□□□ 1.34
SLC6A4-202ENST00000394821 CNGB1Q14028 1251 aaPredicted RBP23.42■■□□□ 1.34
SLC6A4-202ENST00000394821 YTHDC2Q9H6S0 1430 aaKnown RBP23.42■■□□□ 1.34
SLC6A4-202ENST00000394821 PRKRIP1Q9H875 184 aaPredicted RBP23.41■■□□□ 1.34
SLC6A4-202ENST00000394821 ARHGAP23Q9P227 1491 aa23.4■■□□□ 1.34
SLC6A4-202ENST00000394821 SLIT1O75093 1534 aa23.4■■□□□ 1.34
SLC6A4-202ENST00000394821 HDGFP51858 240 aaKnown RBP23.4■■□□□ 1.34
SLC6A4-202ENST00000394821 THEMISQ8N1K5 641 aaPredicted RBP23.4■■□□□ 1.34
SLC6A4-202ENST00000394821 SLC26A8Q96RN1 970 aa23.37■■□□□ 1.33
SLC6A4-202ENST00000394821 ADAMTS13Q76LX8 1427 aa23.37■■□□□ 1.33
SLC6A4-202ENST00000394821 PRAM1Q96QH2 718 aa23.36■■□□□ 1.33
SLC6A4-202ENST00000394821 CCDC184Q52MB2 194 aa23.35■■□□□ 1.33
SLC6A4-202ENST00000394821 EID1Q9Y6B2 187 aa23.35■■□□□ 1.33
SLC6A4-202ENST00000394821 PLEKHG1Q9ULL1 1385 aa23.35■■□□□ 1.33
SLC6A4-202ENST00000394821 SETD1BQ9UPS6 1966 aaKnown RBP23.35■■□□□ 1.33
SLC6A4-202ENST00000394821 WAPLQ7Z5K2 1190 aa23.34■■□□□ 1.33
SLC6A4-202ENST00000394821 ZNF142P52746 1687 aaPredicted RBP23.33■■□□□ 1.33
SLC6A4-202ENST00000394821 PLEKHH1Q9ULM0 1364 aa23.32■■□□□ 1.32
SLC6A4-202ENST00000394821 SBNO2Q9Y2G9 1366 aa23.32■■□□□ 1.32
SLC6A4-202ENST00000394821 PANK3Q9H999 370 aa23.32■■□□□ 1.32
SLC6A4-202ENST00000394821 MYOM1P52179 1685 aa23.31■■□□□ 1.32
SLC6A4-202ENST00000394821 LRPPRCP42704 1394 aaKnown RBP23.31■■□□□ 1.32
SLC6A4-202ENST00000394821 KDM4FA0A1W2PPD8 638 aa23.31■■□□□ 1.32
SLC6A4-202ENST00000394821 MINK1Q8N4C8 1332 aaPredicted RBP23.3■■□□□ 1.32
SLC6A4-202ENST00000394821 TULP4Q9NRJ4 1543 aa23.3■■□□□ 1.32
SLC6A4-202ENST00000394821 POGKQ9P215 609 aa23.3■■□□□ 1.32
SLC6A4-202ENST00000394821 PER1O15534 1290 aaPredicted RBP23.28■■□□□ 1.32
SLC6A4-202ENST00000394821 MED14O60244 1454 aa23.28■■□□□ 1.32
SLC6A4-202ENST00000394821 ABCC11Q96J66 1382 aa23.27■■□□□ 1.32
SLC6A4-202ENST00000394821 CDCA8Q53HL2 280 aa23.27■■□□□ 1.32
SLC6A4-202ENST00000394821 PTPRUQ92729 1446 aa23.26■■□□□ 1.31
SLC6A4-202ENST00000394821 CABP2Q9NPB3 220 aa23.26■■□□□ 1.31
SLC6A4-202ENST00000394821 DLC1Q96QB1 1528 aa23.23■■□□□ 1.31
SLC6A4-202ENST00000394821 ROBO2Q9HCK4 1378 aa23.22■■□□□ 1.31
SLC6A4-202ENST00000394821 ANKLE2Q86XL3 938 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms