RNA–Protein interactions for RNA: ENST00000394805.7

MATR3-201, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-201ENST00000394805 ABCC10Q5T3U5 1492 aa11.28□□□□□ -0.6
MATR3-201ENST00000394805 NUTM2DQ5VT03 806 aaPredicted RBP11.27□□□□□ -0.6
MATR3-201ENST00000394805 TNNQ9UQP3 1299 aa11.27□□□□□ -0.61
MATR3-201ENST00000394805 CDC42BPAQ5VT25 1732 aa11.27□□□□□ -0.61
MATR3-201ENST00000394805 KDM5DQ9BY66 1539 aa11.27□□□□□ -0.61
MATR3-201ENST00000394805 CENPJQ9HC77 1338 aaPredicted RBP11.27□□□□□ -0.61
MATR3-201ENST00000394805 BLMP54132 1417 aaPredicted RBP11.27□□□□□ -0.61
MATR3-201ENST00000394805 SYCP2Q9BX26 1530 aa11.27□□□□□ -0.61
MATR3-201ENST00000394805 KIF3BO15066 747 aa11.26□□□□□ -0.61
MATR3-201ENST00000394805 SAFB2Q14151 953 aaKnown RBP eCLIP11.26□□□□□ -0.61
MATR3-201ENST00000394805 MAGI2Q86UL8 1455 aa11.26□□□□□ -0.61
MATR3-201ENST00000394805 TRAK1Q9UPV9 953 aa11.26□□□□□ -0.61
MATR3-201ENST00000394805 MORC1Q86VD1 984 aa11.25□□□□□ -0.61
MATR3-201ENST00000394805 GZF1Q9H116 711 aaPredicted RBP11.25□□□□□ -0.61
MATR3-201ENST00000394805 CROCC2H7BZ55 1655 aa11.25□□□□□ -0.61
MATR3-201ENST00000394805 E9PSI1 815 aa11.25□□□□□ -0.61
MATR3-201ENST00000394805 EFCAB2Q5VUJ9 269 aa11.25□□□□□ -0.61
MATR3-201ENST00000394805 SHANK2Q9UPX8 1470 aa11.25□□□□□ -0.61
MATR3-201ENST00000394805 SPAG9O60271 1321 aaKnown RBP11.24□□□□□ -0.61
MATR3-201ENST00000394805 POGKQ9P215 609 aa11.24□□□□□ -0.61
MATR3-201ENST00000394805 ZMYM4Q5VZL5 1548 aa11.24□□□□□ -0.61
MATR3-201ENST00000394805 UPF2Q9HAU5 1272 aaKnown RBP11.24□□□□□ -0.61
MATR3-201ENST00000394805 PRKCSHP14314 528 aaPredicted RBP11.23□□□□□ -0.61
MATR3-201ENST00000394805 GPRASP1Q5JY77 1395 aa11.22□□□□□ -0.61
MATR3-201ENST00000394805 BECN1Q14457 450 aa11.22□□□□□ -0.61
MATR3-201ENST00000394805 CARD14Q9BXL6 1004 aa11.22□□□□□ -0.61
MATR3-201ENST00000394805 SLC12A5Q9H2X9 1139 aa11.22□□□□□ -0.61
MATR3-201ENST00000394805 TRPM1Q7Z4N2 1603 aa11.22□□□□□ -0.61
MATR3-201ENST00000394805 TMEM132EQ6IEE7 984 aa11.22□□□□□ -0.61
MATR3-201ENST00000394805 WWC1Q8IX03 1113 aa11.21□□□□□ -0.61
MATR3-201ENST00000394805 SAMD9LQ8IVG5 1584 aa11.21□□□□□ -0.62
MATR3-201ENST00000394805 TCP11L2Q8N4U5 519 aa11.2□□□□□ -0.62
MATR3-201ENST00000394805 U2SURPO15042 1029 aaKnown RBP11.2□□□□□ -0.62
MATR3-201ENST00000394805 U2AF1L5P0DN76 240 aaPredicted RBP11.2□□□□□ -0.62
MATR3-201ENST00000394805 U2AF1Q01081 240 aaKnown RBP eCLIP11.2□□□□□ -0.62
MATR3-201ENST00000394805 ADGRF5Q8IZF2 1346 aa11.2□□□□□ -0.62
MATR3-201ENST00000394805 ZNF521Q96K83 1311 aa11.2□□□□□ -0.62
MATR3-201ENST00000394805 FTSJ3Q8IY81 847 aaKnown RBP11.2□□□□□ -0.62
MATR3-201ENST00000394805 WDR7Q9Y4E6 1490 aa11.19□□□□□ -0.62
MATR3-201ENST00000394805 RLBP1P12271 317 aa11.19□□□□□ -0.62
MATR3-201ENST00000394805 MFAP1P55081 439 aaKnown RBP11.19□□□□□ -0.62
MATR3-201ENST00000394805 CGNL1Q0VF96 1302 aa11.19□□□□□ -0.62
MATR3-201ENST00000394805 ABCA8O94911 1581 aa11.19□□□□□ -0.62
MATR3-201ENST00000394805 E9PCH4 1651 aa11.19□□□□□ -0.62
MATR3-201ENST00000394805 NKTRP30414 1462 aaKnown RBP11.19□□□□□ -0.62
MATR3-201ENST00000394805 ADCY10Q96PN6 1610 aa11.19□□□□□ -0.62
MATR3-201ENST00000394805 PCDHB15Q9Y5E8 787 aa11.19□□□□□ -0.62
MATR3-201ENST00000394805 NUP160Q12769 1436 aa11.18□□□□□ -0.62
MATR3-201ENST00000394805 PDZRN3Q9UPQ7 1066 aa11.18□□□□□ -0.62
MATR3-201ENST00000394805 MTHFSP49914 203 aa11.18□□□□□ -0.62
MATR3-201ENST00000394805 TSR2Q969E8 191 aaKnown RBP11.18□□□□□ -0.62
MATR3-201ENST00000394805 GGT6Q6P531 493 aa11.17□□□□□ -0.62
MATR3-201ENST00000394805 PRDM15P57071 1507 aaPredicted RBP11.17□□□□□ -0.62
MATR3-201ENST00000394805 EIF3AQ14152 1382 aaKnown RBP11.16□□□□□ -0.62
MATR3-201ENST00000394805 TRAPPC8Q9Y2L5 1435 aa11.16□□□□□ -0.62
MATR3-201ENST00000394805 STK26Q9P289 416 aa11.16□□□□□ -0.62
MATR3-201ENST00000394805 RARSP54136 660 aaKnown RBP11.15□□□□□ -0.62
MATR3-201ENST00000394805 PDE3AQ14432 1141 aa11.15□□□□□ -0.62
MATR3-201ENST00000394805 ASXL1Q8IXJ9 1541 aa11.15□□□□□ -0.62
MATR3-201ENST00000394805 MAPK8IP3Q9UPT6 1336 aa11.15□□□□□ -0.62
MATR3-201ENST00000394805 ITPRIPQ8IWB1 547 aa11.15□□□□□ -0.62
MATR3-201ENST00000394805 TRMT2AQ8IZ69 625 aaKnown RBP11.14□□□□□ -0.63
MATR3-201ENST00000394805 PMFBP1Q8TBY8 1022 aa11.14□□□□□ -0.63
MATR3-201ENST00000394805 SCAF11Q99590 1463 aaKnown RBP11.14□□□□□ -0.63
MATR3-201ENST00000394805 RUNDC1Q96C34 613 aa11.14□□□□□ -0.63
MATR3-201ENST00000394805 CFAP53Q96M91 514 aa11.14□□□□□ -0.63
MATR3-201ENST00000394805 SMC4Q9NTJ3 1288 aa11.14□□□□□ -0.63
MATR3-201ENST00000394805 USP19O94966 1318 aa11.14□□□□□ -0.63
MATR3-201ENST00000394805 ARHGEF5Q12774 1597 aa11.14□□□□□ -0.63
MATR3-201ENST00000394805 RWDD1Q9H446 243 aaPredicted RBP11.14□□□□□ -0.63
MATR3-201ENST00000394805 CDC42BPBQ9Y5S2 1711 aa11.14□□□□□ -0.63
MATR3-201ENST00000394805 KANK1Q14678 1352 aa11.14□□□□□ -0.63
MATR3-201ENST00000394805 FOXD4L1Q9NU39 408 aa11.14□□□□□ -0.63
MATR3-201ENST00000394805 TTC37Q6PGP7 1564 aa11.13□□□□□ -0.63
MATR3-201ENST00000394805 TBC1D2Q9BYX2 928 aa11.12□□□□□ -0.63
MATR3-201ENST00000394805 CABP2Q9NPB3 220 aa11.12□□□□□ -0.63
MATR3-201ENST00000394805 NSD3Q9BZ95 1437 aa11.11□□□□□ -0.63
MATR3-201ENST00000394805 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.11□□□□□ -0.633e-7■□□□□ 11.1
MATR3-201ENST00000394805 SCAPERQ9BY12 1400 aa11.11□□□□□ -0.63
MATR3-201ENST00000394805 GGNBP2Q9H3C7 697 aa11.1□□□□□ -0.63
MATR3-201ENST00000394805 PIK3C2GO75747 1445 aa11.1□□□□□ -0.63
MATR3-201ENST00000394805 HSP90AA1P07900 732 aaKnown RBP11.1□□□□□ -0.63
MATR3-201ENST00000394805 EXOSC9Q06265 439 aaKnown RBP11.1□□□□□ -0.63
MATR3-201ENST00000394805 MYO5CQ9NQX4 1742 aa11.1□□□□□ -0.63
MATR3-201ENST00000394805 EIF2AK4Q9P2K8 1649 aaKnown RBP11.1□□□□□ -0.63
MATR3-201ENST00000394805 SRPK2P78362 688 aaKnown RBP11.1□□□□□ -0.63
MATR3-201ENST00000394805 DZIP1LQ8IYY4 767 aaKnown RBP11.1□□□□□ -0.63
MATR3-201ENST00000394805 ZKSCAN2Q63HK3 967 aa11.09□□□□□ -0.63
MATR3-201ENST00000394805 MYH16Q9H6N6 1097 aa11.09□□□□□ -0.63
MATR3-201ENST00000394805 DUOX2Q9NRD8 1548 aa11.09□□□□□ -0.63
MATR3-201ENST00000394805 ELL2O00472 640 aaPredicted RBP11.09□□□□□ -0.63
MATR3-201ENST00000394805 INSRP06213 1382 aa11.09□□□□□ -0.63
MATR3-201ENST00000394805 PREX2Q70Z35 1606 aa11.09□□□□□ -0.63
MATR3-201ENST00000394805 C22orf23Q9BZE7 217 aa11.09□□□□□ -0.63
MATR3-201ENST00000394805 UGGT1Q9NYU2 1555 aa11.08□□□□□ -0.64
MATR3-201ENST00000394805 LNPKQ9C0E8 428 aa11.08□□□□□ -0.64
MATR3-201ENST00000394805 PANK2Q9BZ23 570 aa11.08□□□□□ -0.64
MATR3-201ENST00000394805 TBC1D32Q96NH3 1257 aa11.07□□□□□ -0.64
MATR3-201ENST00000394805 MAST1Q9Y2H9 1570 aa11.07□□□□□ -0.64
MATR3-201ENST00000394805 GOLGA6L3A6NEY3 463 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms