RNA–Protein interactions for RNA: ENST00000394225.6

NDUFC1-202, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

TSL 2

Gene NDUFC1, Length 664 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-202ENST00000394225 SCAF11Q99590 1463 aaKnown RBP22.22■■□□□ 1.15
NDUFC1-202ENST00000394225 ZNF326Q5BKZ1 582 aaKnown RBP22.22■■□□□ 1.15
NDUFC1-202ENST00000394225 NEURL4Q96JN8 1562 aa22.21■■□□□ 1.15
NDUFC1-202ENST00000394225 TXNDC2Q86VQ3 553 aa22.21■■□□□ 1.15
NDUFC1-202ENST00000394225 RIMS2Q9UQ26 1411 aa22.21■■□□□ 1.15
NDUFC1-202ENST00000394225 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.2■■□□□ 1.14
NDUFC1-202ENST00000394225 ZFYVE9O95405 1425 aa22.2■■□□□ 1.14
NDUFC1-202ENST00000394225 MED14O60244 1454 aa22.2■■□□□ 1.14
NDUFC1-202ENST00000394225 MSH5O43196 834 aa22.19■■□□□ 1.14
NDUFC1-202ENST00000394225 LTKP29376 864 aa22.18■■□□□ 1.14
NDUFC1-202ENST00000394225 NPHP4O75161 1426 aaPredicted RBP22.17■■□□□ 1.14
NDUFC1-202ENST00000394225 SPATA31E1Q6ZUB1 1445 aa22.17■■□□□ 1.14
NDUFC1-202ENST00000394225 RPGRIP1LQ68CZ1 1315 aa22.17■■□□□ 1.14
NDUFC1-202ENST00000394225 PPP1R15AO75807 674 aaPredicted RBP22.17■■□□□ 1.14
NDUFC1-202ENST00000394225 IQGAP1P46940 1657 aa22.15■■□□□ 1.14
NDUFC1-202ENST00000394225 NEXMIFQ5QGS0 1516 aa22.14■■□□□ 1.13
NDUFC1-202ENST00000394225 PLEKHG1Q9ULL1 1385 aa22.12■■□□□ 1.13
NDUFC1-202ENST00000394225 RGL3Q3MIN7 710 aa22.11■■□□□ 1.13
NDUFC1-202ENST00000394225 PPLO60437 1756 aa22.1■■□□□ 1.13
NDUFC1-202ENST00000394225 VGFO15240 615 aaPredicted RBP22.09■■□□□ 1.13
NDUFC1-202ENST00000394225 NUTM2DQ5VT03 806 aaPredicted RBP22.08■■□□□ 1.13
NDUFC1-202ENST00000394225 BCANQ96GW7 911 aa22.08■■□□□ 1.13
NDUFC1-202ENST00000394225 IFT172Q9UG01 1749 aa22.07■■□□□ 1.12
NDUFC1-202ENST00000394225 DIP2AQ14689 1571 aa22.04■■□□□ 1.12
NDUFC1-202ENST00000394225 SETBP1Q9Y6X0 1596 aa22.04■■□□□ 1.12
NDUFC1-202ENST00000394225 MYOM2P54296 1465 aa22.03■■□□□ 1.12
NDUFC1-202ENST00000394225 STAC3Q96MF2 364 aa22.02■■□□□ 1.12
NDUFC1-202ENST00000394225 SIN3AQ96ST3 1273 aa22.02■■□□□ 1.12
NDUFC1-202ENST00000394225 CLSPNQ9HAW4 1339 aa22.02■■□□□ 1.12
NDUFC1-202ENST00000394225 NEUROD1Q13562 356 aa22■■□□□ 1.11
NDUFC1-202ENST00000394225 SLC26A8Q96RN1 970 aa22■■□□□ 1.11
NDUFC1-202ENST00000394225 TBX22Q9Y458 520 aa22■■□□□ 1.11
NDUFC1-202ENST00000394225 NRXN3Q9Y4C0 1643 aa21.99■■□□□ 1.11
NDUFC1-202ENST00000394225 ADAMTS13Q76LX8 1427 aa21.99■■□□□ 1.11
NDUFC1-202ENST00000394225 DCAF11Q8TEB1 546 aa21.98■■□□□ 1.11
NDUFC1-202ENST00000394225 CCER1Q8TC90 406 aaPredicted RBP21.97■■□□□ 1.11
NDUFC1-202ENST00000394225 ADGRF5Q8IZF2 1346 aa21.97■■□□□ 1.11
NDUFC1-202ENST00000394225 NRXN1Q9ULB1 1477 aa21.96■■□□□ 1.11
NDUFC1-202ENST00000394225 PIK3R4Q99570 1358 aa21.96■■□□□ 1.11
NDUFC1-202ENST00000394225 ZNF335Q9H4Z2 1342 aaPredicted RBP21.95■■□□□ 1.1
NDUFC1-202ENST00000394225 PIK3C2GO75747 1445 aa21.95■■□□□ 1.1
NDUFC1-202ENST00000394225 KDM2AQ9Y2K7 1162 aa21.93■■□□□ 1.1
NDUFC1-202ENST00000394225 ALKQ9UM73 1620 aa21.92■■□□□ 1.1
NDUFC1-202ENST00000394225 CPS1P31327 1500 aa21.92■■□□□ 1.1
NDUFC1-202ENST00000394225 TONSLQ96HA7 1378 aa21.92■■□□□ 1.1
NDUFC1-202ENST00000394225 LAMC1P11047 1609 aa21.91■■□□□ 1.1
NDUFC1-202ENST00000394225 LTBP4Q8N2S1 1624 aa21.91■■□□□ 1.1
NDUFC1-202ENST00000394225 KCNA6P17658 529 aa21.91■■□□□ 1.1
NDUFC1-202ENST00000394225 L3MBTL2Q969R5 705 aa21.91■■□□□ 1.1
NDUFC1-202ENST00000394225 NWD1Q149M9 1564 aa21.91■■□□□ 1.1
NDUFC1-202ENST00000394225 SETD1AO15047 1707 aaKnown RBP21.9■■□□□ 1.1
NDUFC1-202ENST00000394225 CHD2O14647 1828 aaKnown RBP21.9■■□□□ 1.1
NDUFC1-202ENST00000394225 NKTRP30414 1462 aaKnown RBP21.88■■□□□ 1.09
NDUFC1-202ENST00000394225 C14orf93Q9H972 538 aaKnown RBP21.87■■□□□ 1.09
NDUFC1-202ENST00000394225 STRCP1A6NGW2 1772 aa21.87■■□□□ 1.09
NDUFC1-202ENST00000394225 METP08581 1390 aa21.87■■□□□ 1.09
NDUFC1-202ENST00000394225 PRAG1Q86YV5 1406 aa21.84■■□□□ 1.09
NDUFC1-202ENST00000394225 TIMELESSQ9UNS1 1208 aa21.83■■□□□ 1.09
NDUFC1-202ENST00000394225 AMOTL2Q9Y2J4 779 aa21.83■■□□□ 1.09
NDUFC1-202ENST00000394225 XRN1Q8IZH2 1706 aaKnown RBP21.83■■□□□ 1.08
NDUFC1-202ENST00000394225 PTPRUQ92729 1446 aa21.82■■□□□ 1.08
NDUFC1-202ENST00000394225 CFAP70Q5T0N1 1121 aa21.82■■□□□ 1.08
NDUFC1-202ENST00000394225 IQSEC2Q5JU85 1478 aa21.82■■□□□ 1.08
NDUFC1-202ENST00000394225 KIAA1210Q9ULL0 1709 aa21.81■■□□□ 1.08
NDUFC1-202ENST00000394225 CERKQ8TCT0 537 aa21.81■■□□□ 1.08
NDUFC1-202ENST00000394225 LRRC7Q96NW7 1537 aa21.8■■□□□ 1.08
NDUFC1-202ENST00000394225 ASXL1Q8IXJ9 1541 aa21.8■■□□□ 1.08
NDUFC1-202ENST00000394225 PROSER2Q86WR7 435 aaPredicted RBP21.79■■□□□ 1.08
NDUFC1-202ENST00000394225 LRPPRCP42704 1394 aaKnown RBP21.77■■□□□ 1.08
NDUFC1-202ENST00000394225 TMEM132EQ6IEE7 984 aa21.77■■□□□ 1.08
NDUFC1-202ENST00000394225 PTCH1Q13635 1447 aa21.77■■□□□ 1.08
NDUFC1-202ENST00000394225 YTHDC2Q9H6S0 1430 aaKnown RBP21.77■■□□□ 1.08
NDUFC1-202ENST00000394225 ADGRB1O14514 1584 aa21.77■■□□□ 1.08
NDUFC1-202ENST00000394225 TMEM94Q12767 1356 aa21.75■■□□□ 1.07
NDUFC1-202ENST00000394225 KNDC1Q76NI1 1749 aa21.75■■□□□ 1.07
NDUFC1-202ENST00000394225 TECPR2O15040 1411 aa21.75■■□□□ 1.07
NDUFC1-202ENST00000394225 NCOA3Q9Y6Q9 1424 aa21.75■■□□□ 1.07
NDUFC1-202ENST00000394225 ABCC11Q96J66 1382 aa21.74■■□□□ 1.07
NDUFC1-202ENST00000394225 STK26Q9P289 416 aa21.73■■□□□ 1.07
NDUFC1-202ENST00000394225 TRPM1Q7Z4N2 1603 aa21.73■■□□□ 1.07
NDUFC1-202ENST00000394225 XIRP1Q702N8 1843 aaKnown RBP21.71■■□□□ 1.07
NDUFC1-202ENST00000394225 ROBO2Q9HCK4 1378 aa21.7■■□□□ 1.06
NDUFC1-202ENST00000394225 DLC1Q96QB1 1528 aa21.7■■□□□ 1.06
NDUFC1-202ENST00000394225 NBPF8Q3BBV2 869 aa21.69■■□□□ 1.06
NDUFC1-202ENST00000394225 C14orf37Q86TY3 774 aa21.69■■□□□ 1.06
NDUFC1-202ENST00000394225 SIRT1Q96EB6 747 aa21.69■■□□□ 1.06
NDUFC1-202ENST00000394225 ROCK2O75116 1388 aaKnown RBP21.68■■□□□ 1.06
NDUFC1-202ENST00000394225 MSH6P52701 1360 aa21.68■■□□□ 1.06
NDUFC1-202ENST00000394225 FAM135BQ49AJ0 1406 aa21.68■■□□□ 1.06
NDUFC1-202ENST00000394225 NBPF1Q3BBV0 1214 aa21.67■■□□□ 1.06
NDUFC1-202ENST00000394225 RBM33Q96EV2 1170 aaKnown RBP21.67■■□□□ 1.06
NDUFC1-202ENST00000394225 RALGAPBQ86X10 1494 aa21.66■■□□□ 1.06
NDUFC1-202ENST00000394225 TRAK1Q9UPV9 953 aa21.65■■□□□ 1.06
NDUFC1-202ENST00000394225 ADGRL3Q9HAR2 1447 aa21.64■■□□□ 1.06
NDUFC1-202ENST00000394225 GPRASP1Q5JY77 1395 aa21.64■■□□□ 1.06
NDUFC1-202ENST00000394225 C19orf44Q9H6X5 657 aa21.63■■□□□ 1.05
NDUFC1-202ENST00000394225 TOM1O60784 492 aa21.62■■□□□ 1.05
NDUFC1-202ENST00000394225 POGKQ9P215 609 aa21.62■■□□□ 1.05
NDUFC1-202ENST00000394225 ARHGEF28Q8N1W1 1705 aaKnown RBP21.62■■□□□ 1.05
NDUFC1-202ENST00000394225 DCCP43146 1447 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms