RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 ST20-MTHFSA0A0A6YYL1 179 aa31.99■■■□□ 2.71
RARA-204ENST00000394089 ANP32CO43423 234 aa31.99■■■□□ 2.71
RARA-204ENST00000394089 KIAA1210Q9ULL0 1709 aa31.98■■■□□ 2.71
RARA-204ENST00000394089 PREX1Q8TCU6 1659 aa31.95■■■□□ 2.71
RARA-204ENST00000394089 NRXN1Q9ULB1 1477 aa31.95■■■□□ 2.7
RARA-204ENST00000394089 RPGRIP1LQ68CZ1 1315 aa31.94■■■□□ 2.7
RARA-204ENST00000394089 SLC52A1Q9NWF4 448 aa31.92■■■□□ 2.7
RARA-204ENST00000394089 CHGAP10645 457 aaKnown RBP31.9■■■□□ 2.7
RARA-204ENST00000394089 CLTCQ00610 1675 aaKnown RBP31.89■■■□□ 2.7
RARA-204ENST00000394089 PPLO60437 1756 aa31.89■■■□□ 2.7
RARA-204ENST00000394089 CCER2I3L3R5 266 aa31.88■■■□□ 2.69
RARA-204ENST00000394089 ADGRF5Q8IZF2 1346 aa31.88■■■□□ 2.69
RARA-204ENST00000394089 IQGAP1P46940 1657 aa31.88■■■□□ 2.69
RARA-204ENST00000394089 ERVK-7P63135 1459 aa31.87■■■□□ 2.69
RARA-204ENST00000394089 IDI1Q13907 227 aa31.85■■■□□ 2.69
RARA-204ENST00000394089 SCAF11Q99590 1463 aaKnown RBP31.84■■■□□ 2.69
RARA-204ENST00000394089 TRHP20396 242 aaPredicted RBP31.83■■■□□ 2.69
RARA-204ENST00000394089 MLECQ14165 292 aa31.81■■■□□ 2.68
RARA-204ENST00000394089 TESK2Q96S53 571 aa31.81■■■□□ 2.68
RARA-204ENST00000394089 SPATA31D1Q6ZQQ2 1576 aa31.8■■■□□ 2.68
RARA-204ENST00000394089 PIK3C2GO75747 1445 aa31.79■■■□□ 2.68
RARA-204ENST00000394089 FBXO31Q5XUX0 539 aaPredicted RBP31.79■■■□□ 2.68
RARA-204ENST00000394089 NEXMIFQ5QGS0 1516 aa31.78■■■□□ 2.68
RARA-204ENST00000394089 CFAP70Q5T0N1 1121 aa31.78■■■□□ 2.68
RARA-204ENST00000394089 TMEM131LA2VDJ0 1609 aa31.77■■■□□ 2.68
RARA-204ENST00000394089 SETBP1Q9Y6X0 1596 aa31.76■■■□□ 2.67
RARA-204ENST00000394089 POLR3GLQ9BT43 218 aa31.75■■■□□ 2.67
RARA-204ENST00000394089 ZFYVE9O95405 1425 aa31.73■■■□□ 2.67
RARA-204ENST00000394089 RBM19Q9Y4C8 960 aaKnown RBP31.73■■■□□ 2.67
RARA-204ENST00000394089 EIF3AQ14152 1382 aaKnown RBP31.73■■■□□ 2.67
RARA-204ENST00000394089 VGFO15240 615 aaPredicted RBP31.73■■■□□ 2.67
RARA-204ENST00000394089 ESF1Q9H501 851 aaKnown RBP31.73■■■□□ 2.67
RARA-204ENST00000394089 C14orf93Q9H972 538 aaKnown RBP31.71■■■□□ 2.67
RARA-204ENST00000394089 TMF1P82094 1093 aa31.7■■■□□ 2.67
RARA-204ENST00000394089 ZMYM3Q14202 1370 aa31.7■■■□□ 2.66
RARA-204ENST00000394089 DISP3Q9P2K9 1392 aa31.69■■■□□ 2.66
RARA-204ENST00000394089 MYO5BQ9ULV0 1848 aa31.67■■■□□ 2.66
RARA-204ENST00000394089 PRKRIP1Q9H875 184 aaPredicted RBP31.67■■■□□ 2.66
RARA-204ENST00000394089 FKBP8Q14318 412 aa31.66■■■□□ 2.66
RARA-204ENST00000394089 ADGRB1O14514 1584 aa31.64■■■□□ 2.66
RARA-204ENST00000394089 SLC24A1O60721 1099 aa31.61■■■□□ 2.65
RARA-204ENST00000394089 MYO3AQ8NEV4 1616 aa31.6■■■□□ 2.65
RARA-204ENST00000394089 A2ML1A8K2U0 1454 aa31.58■■■□□ 2.65
RARA-204ENST00000394089 CDCA8Q53HL2 280 aa31.57■■■□□ 2.64
RARA-204ENST00000394089 STAG3Q9UJ98 1225 aa31.57■■■□□ 2.64
RARA-204ENST00000394089 NUTM2DQ5VT03 806 aaPredicted RBP31.56■■■□□ 2.64
RARA-204ENST00000394089 SBNO2Q9Y2G9 1366 aa31.54■■■□□ 2.64
RARA-204ENST00000394089 NEFLP07196 543 aa31.53■■■□□ 2.64
RARA-204ENST00000394089 BCANQ96GW7 911 aa31.53■■■□□ 2.64
RARA-204ENST00000394089 TNRQ92752 1358 aa31.52■■■□□ 2.64
RARA-204ENST00000394089 FANCIQ9NVI1 1328 aa31.51■■■□□ 2.63
RARA-204ENST00000394089 TMEM132EQ6IEE7 984 aa31.49■■■□□ 2.63
RARA-204ENST00000394089 CENPJQ9HC77 1338 aaPredicted RBP31.48■■■□□ 2.63
RARA-204ENST00000394089 KDM5AP29375 1690 aaKnown RBP31.47■■■□□ 2.63
RARA-204ENST00000394089 KTN1Q86UP2 1357 aaKnown RBP31.47■■■□□ 2.63
RARA-204ENST00000394089 RIMS2Q9UQ26 1411 aa31.46■■■□□ 2.63
RARA-204ENST00000394089 TRAK1Q9UPV9 953 aa31.46■■■□□ 2.63
RARA-204ENST00000394089 PER1O15534 1290 aaPredicted RBP31.45■■■□□ 2.63
RARA-204ENST00000394089 ASXL1Q8IXJ9 1541 aa31.44■■■□□ 2.62
RARA-204ENST00000394089 MSH5O43196 834 aa31.41■■■□□ 2.62
RARA-204ENST00000394089 PANK3Q9H999 370 aa31.41■■■□□ 2.62
RARA-204ENST00000394089 FER1L4A9Z1Z3 1794 aa31.41■■■□□ 2.62
RARA-204ENST00000394089 QRICH2Q9H0J4 1663 aa31.41■■■□□ 2.62
RARA-204ENST00000394089 ALKQ9UM73 1620 aa31.4■■■□□ 2.62
RARA-204ENST00000394089 ARHGEF28Q8N1W1 1705 aaKnown RBP31.4■■■□□ 2.62
RARA-204ENST00000394089 RALBP1Q15311 655 aa31.39■■■□□ 2.62
RARA-204ENST00000394089 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.39■■■□□ 2.62
RARA-204ENST00000394089 NLRP1Q9C000 1473 aa31.39■■■□□ 2.62
RARA-204ENST00000394089 CCDC184Q52MB2 194 aa31.39■■■□□ 2.62
RARA-204ENST00000394089 C3P01024 1663 aa31.38■■■□□ 2.61
RARA-204ENST00000394089 MYOM1P52179 1685 aa31.37■■■□□ 2.61
RARA-204ENST00000394089 MRS2Q9HD23 443 aa31.37■■■□□ 2.61
RARA-204ENST00000394089 UBR1Q8IWV7 1749 aa31.36■■■□□ 2.61
RARA-204ENST00000394089 HDGFP51858 240 aaKnown RBP31.34■■■□□ 2.61
RARA-204ENST00000394089 PARD3Q8TEW0 1356 aa31.32■■■□□ 2.6
RARA-204ENST00000394089 YTHDC2Q9H6S0 1430 aaKnown RBP31.32■■■□□ 2.6
RARA-204ENST00000394089 CEBPAP49715 358 aaPredicted RBP31.31■■■□□ 2.6
RARA-204ENST00000394089 TMEM2Q9UHN6 1383 aa31.3■■■□□ 2.6
RARA-204ENST00000394089 MYBBP1AQ9BQG0 1328 aaKnown RBP31.3■■■□□ 2.6
RARA-204ENST00000394089 SETD1AO15047 1707 aaKnown RBP31.29■■■□□ 2.6
RARA-204ENST00000394089 CNGB1Q14028 1251 aaPredicted RBP31.29■■■□□ 2.6
RARA-204ENST00000394089 PUS7Q96PZ0 661 aaKnown RBP31.28■■■□□ 2.6
RARA-204ENST00000394089 PTPRMP28827 1452 aa31.28■■■□□ 2.6
RARA-204ENST00000394089 NRXN3Q9Y4C0 1643 aa31.27■■■□□ 2.6
RARA-204ENST00000394089 STK26Q9P289 416 aa31.25■■■□□ 2.59
RARA-204ENST00000394089 SENP3Q9H4L4 574 aaPredicted RBP31.24■■■□□ 2.59
RARA-204ENST00000394089 BRD4O60885 1362 aaPredicted RBP31.24■■■□□ 2.59
RARA-204ENST00000394089 KNSTRNQ9Y448 316 aa31.23■■■□□ 2.59
RARA-204ENST00000394089 DLC1Q96QB1 1528 aa31.23■■■□□ 2.59
RARA-204ENST00000394089 EVC2Q86UK5 1308 aa31.23■■■□□ 2.59
RARA-204ENST00000394089 LRPPRCP42704 1394 aaKnown RBP31.22■■■□□ 2.59
RARA-204ENST00000394089 TULP4Q9NRJ4 1543 aa31.22■■■□□ 2.59
RARA-204ENST00000394089 NPC1L1Q9UHC9 1359 aa31.2■■■□□ 2.59
RARA-204ENST00000394089 CC2D1BQ5T0F9 858 aaKnown RBP31.18■■■□□ 2.58
RARA-204ENST00000394089 FAM9BQ8IZU0 186 aa31.18■■■□□ 2.58
RARA-204ENST00000394089 AMER1Q5JTC6 1135 aaPredicted RBP31.17■■■□□ 2.58
RARA-204ENST00000394089 ERICH6BQ5W0A0 696 aa31.17■■■□□ 2.58
RARA-204ENST00000394089 NLRP13Q86W25 1043 aa31.17■■■□□ 2.58
RARA-204ENST00000394089 ABCC11Q96J66 1382 aa31.17■■■□□ 2.58
RARA-204ENST00000394089 TMC1Q8TDI8 760 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms