RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 TEX14Q8IWB6 1497 aa10.74□□□□□ -0.69
GABRA1-202ENST00000393943 PARD3Q8TEW0 1356 aa10.74□□□□□ -0.69
GABRA1-202ENST00000393943 VSIG10Q8N0Z9 540 aa10.74□□□□□ -0.69
GABRA1-202ENST00000393943 KIAA0586Q9BVV6 1533 aa10.74□□□□□ -0.69
GABRA1-202ENST00000393943 UHRF1BP1Q6BDS2 1440 aa10.74□□□□□ -0.69
GABRA1-202ENST00000393943 CDK13Q14004 1512 aaKnown RBP10.74□□□□□ -0.69
GABRA1-202ENST00000393943 TRAK2O60296 914 aa10.73□□□□□ -0.69
GABRA1-202ENST00000393943 U2AF1L5P0DN76 240 aaPredicted RBP10.73□□□□□ -0.69
GABRA1-202ENST00000393943 U2AF1Q01081 240 aaKnown RBP eCLIP10.73□□□□□ -0.69
GABRA1-202ENST00000393943 NKTRP30414 1462 aaKnown RBP10.73□□□□□ -0.69
GABRA1-202ENST00000393943 ST18O60284 1047 aa10.73□□□□□ -0.69
GABRA1-202ENST00000393943 SLFN5Q08AF3 891 aa10.73□□□□□ -0.69
GABRA1-202ENST00000393943 DZIP1LQ8IYY4 767 aaKnown RBP10.73□□□□□ -0.69
GABRA1-202ENST00000393943 NUCB2P80303 420 aa10.72□□□□□ -0.69
GABRA1-202ENST00000393943 KIF16BQ96L93 1317 aa10.72□□□□□ -0.69
GABRA1-202ENST00000393943 U2SURPO15042 1029 aaKnown RBP10.72□□□□□ -0.69
GABRA1-202ENST00000393943 CCDC173Q0VFZ6 552 aa10.72□□□□□ -0.69
GABRA1-202ENST00000393943 JPH4Q96JJ6 628 aa10.72□□□□□ -0.69
GABRA1-202ENST00000393943 CCDC141Q6ZP82 1450 aa10.72□□□□□ -0.69
GABRA1-202ENST00000393943 ZMYM4Q5VZL5 1548 aa10.72□□□□□ -0.69
GABRA1-202ENST00000393943 SPATA31E1Q6ZUB1 1445 aa10.71□□□□□ -0.69
GABRA1-202ENST00000393943 SAMD9Q5K651 1589 aa10.71□□□□□ -0.69
GABRA1-202ENST00000393943 DDX49Q9Y6V7 483 aaKnown RBP10.71□□□□□ -0.69
GABRA1-202ENST00000393943 DNMT1P26358 1616 aaKnown RBP10.71□□□□□ -0.69
GABRA1-202ENST00000393943 MCM4P33991 863 aa10.71□□□□□ -0.69
GABRA1-202ENST00000393943 NUP160Q12769 1436 aa10.71□□□□□ -0.69
GABRA1-202ENST00000393943 WDR63Q8IWG1 891 aa10.7□□□□□ -0.7
GABRA1-202ENST00000393943 ABCA5Q8WWZ7 1642 aa10.7□□□□□ -0.7
GABRA1-202ENST00000393943 LMOD3Q0VAK6 560 aa10.7□□□□□ -0.7
GABRA1-202ENST00000393943 ERCC6Q03468 1493 aa10.69□□□□□ -0.7
GABRA1-202ENST00000393943 EIF2AK4Q9P2K8 1649 aaKnown RBP10.69□□□□□ -0.7
GABRA1-202ENST00000393943 NPM1P06748 294 aaKnown RBP eCLIP10.69□□□□□ -0.7
GABRA1-202ENST00000393943 GOLGA6L6A8MZA4 724 aa10.69□□□□□ -0.7
GABRA1-202ENST00000393943 PKNOX2Q96KN3 472 aa10.69□□□□□ -0.7
GABRA1-202ENST00000393943 IFT140Q96RY7 1462 aa10.68□□□□□ -0.7
GABRA1-202ENST00000393943 STAG3Q9UJ98 1225 aa10.68□□□□□ -0.7
GABRA1-202ENST00000393943 GRPEL1Q9HAV7 217 aa10.68□□□□□ -0.7
GABRA1-202ENST00000393943 SYNJ2O15056 1496 aa10.68□□□□□ -0.7
GABRA1-202ENST00000393943 ZMYM3Q14202 1370 aa10.67□□□□□ -0.7
GABRA1-202ENST00000393943 ESPNB1AK53 854 aa10.67□□□□□ -0.7
GABRA1-202ENST00000393943 DUSP27Q5VZP5 1158 aa10.67□□□□□ -0.7
GABRA1-202ENST00000393943 HDGFL2Q7Z4V5 671 aaPredicted RBP10.67□□□□□ -0.7
GABRA1-202ENST00000393943 SPAG9O60271 1321 aaKnown RBP10.67□□□□□ -0.7
GABRA1-202ENST00000393943 SHANK2Q9UPX8 1470 aa10.67□□□□□ -0.7
GABRA1-202ENST00000393943 HMMRO75330 724 aa10.67□□□□□ -0.7
GABRA1-202ENST00000393943 TERF2IPQ9NYB0 399 aa10.67□□□□□ -0.7
GABRA1-202ENST00000393943 PDZRN3Q9UPQ7 1066 aa10.67□□□□□ -0.7
GABRA1-202ENST00000393943 NRDCO43847 1150 aa10.66□□□□□ -0.7
GABRA1-202ENST00000393943 PRG4Q92954 1404 aaPredicted RBP10.66□□□□□ -0.7
GABRA1-202ENST00000393943 NASPP49321 788 aaPredicted RBP10.66□□□□□ -0.7
GABRA1-202ENST00000393943 CLCN1P35523 988 aa10.66□□□□□ -0.7
GABRA1-202ENST00000393943 ADGRL2O95490 1459 aa10.66□□□□□ -0.7
GABRA1-202ENST00000393943 PTPRGP23470 1445 aa10.66□□□□□ -0.7
GABRA1-202ENST00000393943 PANK1Q8TE04 598 aa10.65□□□□□ -0.7
GABRA1-202ENST00000393943 GPRASP1Q5JY77 1395 aa10.65□□□□□ -0.7
GABRA1-202ENST00000393943 WDR62O43379 1518 aa10.65□□□□□ -0.7
GABRA1-202ENST00000393943 REC8O95072 547 aa10.65□□□□□ -0.7
GABRA1-202ENST00000393943 CCDC39Q9UFE4 941 aa10.64□□□□□ -0.71
GABRA1-202ENST00000393943 BLMP54132 1417 aaPredicted RBP10.64□□□□□ -0.71
GABRA1-202ENST00000393943 C8orf34Q49A92 452 aa10.64□□□□□ -0.71
GABRA1-202ENST00000393943 ZNF428Q96B54 188 aa10.64□□□□□ -0.71
GABRA1-202ENST00000393943 EVC2Q86UK5 1308 aa10.64□□□□□ -0.71
GABRA1-202ENST00000393943 POGKQ9P215 609 aa10.64□□□□□ -0.71
GABRA1-202ENST00000393943 ARHGEF11O15085 1522 aa10.63□□□□□ -0.71
GABRA1-202ENST00000393943 MRC2Q9UBG0 1479 aa10.63□□□□□ -0.71
GABRA1-202ENST00000393943 GCC1Q96CN9 775 aa10.63□□□□□ -0.71
GABRA1-202ENST00000393943 RAPGEF6Q8TEU7 1601 aa10.63□□□□□ -0.71
GABRA1-202ENST00000393943 PZPP20742 1482 aa10.63□□□□□ -0.71
GABRA1-202ENST00000393943 MBD3O95983 291 aa10.63□□□□□ -0.71
GABRA1-202ENST00000393943 MVPQ14764 893 aaKnown RBP10.63□□□□□ -0.71
GABRA1-202ENST00000393943 NBPF1Q3BBV0 1214 aa10.63□□□□□ -0.71
GABRA1-202ENST00000393943 KDM2BQ8NHM5 1336 aa10.63□□□□□ -0.71
GABRA1-202ENST00000393943 TBC1D32Q96NH3 1257 aa10.63□□□□□ -0.71
GABRA1-202ENST00000393943 CHMP4AQ9BY43 222 aa10.63□□□□□ -0.71
GABRA1-202ENST00000393943 CWC22Q9HCG8 908 aaKnown RBP10.63□□□□□ -0.71
GABRA1-202ENST00000393943 API5Q9BZZ5 524 aaKnown RBP10.62□□□□□ -0.71
GABRA1-202ENST00000393943 ATP6V1DQ9Y5K8 247 aa10.62□□□□□ -0.71
GABRA1-202ENST00000393943 PIK3C2GO75747 1445 aa10.62□□□□□ -0.71
GABRA1-202ENST00000393943 RABEP1Q15276 862 aa10.62□□□□□ -0.71
GABRA1-202ENST00000393943 CDC45O75419 566 aa10.62□□□□□ -0.71
GABRA1-202ENST00000393943 PRAG1Q86YV5 1406 aa10.62□□□□□ -0.71
GABRA1-202ENST00000393943 BCAR3O75815 825 aa10.61□□□□□ -0.71
GABRA1-202ENST00000393943 SRPK2P78362 688 aaKnown RBP10.61□□□□□ -0.71
GABRA1-202ENST00000393943 ADGBQ8N7X0 1667 aa10.61□□□□□ -0.71
GABRA1-202ENST00000393943 MAGI1Q96QZ7 1491 aaPredicted RBP10.61□□□□□ -0.71
GABRA1-202ENST00000393943 GPATCH8Q9UKJ3 1502 aaKnown RBP10.61□□□□□ -0.71
GABRA1-202ENST00000393943 HTATSF1O43719 755 aaKnown RBP10.61□□□□□ -0.71
GABRA1-202ENST00000393943 HMGN5P82970 282 aaKnown RBP10.61□□□□□ -0.71
GABRA1-202ENST00000393943 CDK11BP21127 795 aaKnown RBP10.61□□□□□ -0.71
GABRA1-202ENST00000393943 ANKRD45Q5TZF3 282 aa10.61□□□□□ -0.71
GABRA1-202ENST00000393943 INTS3Q68E01 1043 aaKnown RBP10.61□□□□□ -0.71
GABRA1-202ENST00000393943 ZSCAN30Q86W11 494 aa10.61□□□□□ -0.71
GABRA1-202ENST00000393943 TPM3P06753 285 aa10.61□□□□□ -0.71
GABRA1-202ENST00000393943 TCP11L2Q8N4U5 519 aa10.61□□□□□ -0.71
GABRA1-202ENST00000393943 COL17A1Q9UMD9 1497 aaPredicted RBP10.61□□□□□ -0.71
GABRA1-202ENST00000393943 NPC1L1Q9UHC9 1359 aa10.6□□□□□ -0.71
GABRA1-202ENST00000393943 MCM2P49736 904 aa10.6□□□□□ -0.71
GABRA1-202ENST00000393943 ZRSR1Q15695 479 aaKnown RBP10.6□□□□□ -0.71
GABRA1-202ENST00000393943 C20orf194Q5TEA3 1177 aa10.6□□□□□ -0.71
GABRA1-202ENST00000393943 PDCL3Q9H2J4 239 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms