RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 FGD5Q6ZNL6 1462 aa8.83□□□□□ -1
DDX60-201ENST00000393743 MINK1Q8N4C8 1332 aaPredicted RBP8.83□□□□□ -1
DDX60-201ENST00000393743 TRIM29Q14134 588 aa8.83□□□□□ -1
DDX60-201ENST00000393743 VPS53Q5VIR6 699 aa8.83□□□□□ -1
DDX60-201ENST00000393743 H3BQV1 296 aa8.83□□□□□ -1
DDX60-201ENST00000393743 MFAP1P55081 439 aaKnown RBP8.83□□□□□ -1
DDX60-201ENST00000393743 IFFO2Q5TF58 517 aa8.83□□□□□ -1
DDX60-201ENST00000393743 SCAPERQ9BY12 1400 aa8.83□□□□□ -1
DDX60-201ENST00000393743 RRBP1Q9P2E9 1410 aaKnown RBP8.83□□□□□ -1
DDX60-201ENST00000393743 USP47Q96K76 1375 aa8.83□□□□□ -1
DDX60-201ENST00000393743 TRDNQ13061 729 aa8.83□□□□□ -1
DDX60-201ENST00000393743 FYCO1Q9BQS8 1478 aa8.82□□□□□ -1
DDX60-201ENST00000393743 VPS37DQ86XT2 251 aa8.82□□□□□ -1
DDX60-201ENST00000393743 HOOK1Q9UJC3 728 aaKnown RBP8.82□□□□□ -1
DDX60-201ENST00000393743 SYNJ2O15056 1496 aa8.82□□□□□ -1
DDX60-201ENST00000393743 NUTM2FA1L443 756 aa8.82□□□□□ -1
DDX60-201ENST00000393743 DDX11L8A8MPP1 907 aa8.82□□□□□ -1
DDX60-201ENST00000393743 POGZQ7Z3K3 1410 aa8.82□□□□□ -1
DDX60-201ENST00000393743 G3BP1Q13283 466 aaKnown RBP eCLIP8.82□□□□□ -1
DDX60-201ENST00000393743 GOLGA6L1Q8N7Z2 621 aa8.82□□□□□ -1
DDX60-201ENST00000393743 IFIT2P09913 472 aaKnown RBP8.81□□□□□ -1
DDX60-201ENST00000393743 SKOR2Q2VWA4 1001 aaPredicted RBP8.81□□□□□ -1
DDX60-201ENST00000393743 ERC2O15083 957 aa8.81□□□□□ -1
DDX60-201ENST00000393743 CCDC146Q8IYE0 955 aa8.81□□□□□ -1
DDX60-201ENST00000393743 THEMISQ8N1K5 641 aaPredicted RBP8.81□□□□□ -1
DDX60-201ENST00000393743 ANKRD20A12PQ8NF67 263 aa8.81□□□□□ -1
DDX60-201ENST00000393743 IGF1RP08069 1367 aa8.81□□□□□ -1
DDX60-201ENST00000393743 TOP2BQ02880 1626 aa8.81□□□□□ -1
DDX60-201ENST00000393743 RBM33Q96EV2 1170 aaKnown RBP8.81□□□□□ -1
DDX60-201ENST00000393743 TPD52L1Q16890 204 aaPredicted RBP8.8□□□□□ -1
DDX60-201ENST00000393743 CLUAP1Q96AJ1 413 aa8.8□□□□□ -1
DDX60-201ENST00000393743 ERICH2A1L162 156 aa8.8□□□□□ -1
DDX60-201ENST00000393743 RUNDC1Q96C34 613 aa8.8□□□□□ -1
DDX60-201ENST00000393743 RUSC2Q8N2Y8 1516 aa8.79□□□□□ -1
DDX60-201ENST00000393743 HFM1A2PYH4 1435 aa8.79□□□□□ -1
DDX60-201ENST00000393743 GAS2L2Q8NHY3 880 aa8.79□□□□□ -1
DDX60-201ENST00000393743 NCBP3Q53F19 620 aaKnown RBP8.79□□□□□ -1
DDX60-201ENST00000393743 GOLGA6L3A6NEY3 463 aa8.78□□□□□ -1
DDX60-201ENST00000393743 CPLX1O14810 134 aa8.78□□□□□ -1
DDX60-201ENST00000393743 CCDC70Q6NSX1 233 aa8.78□□□□□ -1
DDX60-201ENST00000393743 SMG6Q86US8 1419 aaKnown RBP8.78□□□□□ -1
DDX60-201ENST00000393743 ANKRD50Q9ULJ7 1429 aa8.78□□□□□ -1
DDX60-201ENST00000393743 IFT140Q96RY7 1462 aa8.78□□□□□ -1
DDX60-201ENST00000393743 CWC22Q9HCG8 908 aaKnown RBP8.78□□□□□ -1
DDX60-201ENST00000393743 A0A0U1RQG5 324 aaPredicted RBP8.78□□□□□ -1
DDX60-201ENST00000393743 SLC52A1Q9NWF4 448 aa8.78□□□□□ -1
DDX60-201ENST00000393743 FGD6Q6ZV73 1430 aa8.78□□□□□ -1
DDX60-201ENST00000393743 RILPL2Q969X0 211 aa8.78□□□□□ -1
DDX60-201ENST00000393743 PRM3Q9NNZ6 103 aa8.78□□□□□ -1
DDX60-201ENST00000393743 BICRAQ9NZM4 1560 aa8.78□□□□□ -1
DDX60-201ENST00000393743 PRXQ9BXM0 1461 aa8.78□□□□□ -1
DDX60-201ENST00000393743 IPO7O95373 1038 aaKnown RBP8.77□□□□□ -1
DDX60-201ENST00000393743 SPRYD3Q8NCJ5 442 aa8.77□□□□□ -1
DDX60-201ENST00000393743 ZBED9Q6R2W3 1325 aa8.77□□□□□ -1.01
DDX60-201ENST00000393743 PLEKHO1Q53GL0 409 aaPredicted RBP8.77□□□□□ -1.01
DDX60-201ENST00000393743 ANKRD45Q5TZF3 282 aa8.77□□□□□ -1.01
DDX60-201ENST00000393743 RIPK4P57078 832 aa8.77□□□□□ -1.01
DDX60-201ENST00000393743 CASKIN1Q8WXD9 1431 aa8.77□□□□□ -1.01
DDX60-201ENST00000393743 GOLGA6L19H0YKK7 550 aa8.77□□□□□ -1.01
DDX60-201ENST00000393743 SAFBQ15424 915 aaKnown RBP eCLIP8.77□□□□□ -1.01
DDX60-201ENST00000393743 PNISRQ8TF01 805 aaKnown RBP8.77□□□□□ -1.01
DDX60-201ENST00000393743 ZNF692Q9BU19 519 aaPredicted RBP8.77□□□□□ -1.01
DDX60-201ENST00000393743 PRKRIP1Q9H875 184 aaPredicted RBP8.77□□□□□ -1.01
DDX60-201ENST00000393743 EIF2S2P20042 333 aaKnown RBP8.76□□□□□ -1.01
DDX60-201ENST00000393743 FKBP5Q13451 457 aaPredicted RBP8.76□□□□□ -1.01
DDX60-201ENST00000393743 DZIP1LQ8IYY4 767 aaKnown RBP8.76□□□□□ -1.01
DDX60-201ENST00000393743 FAM161AQ3B820 660 aa8.76□□□□□ -1.01
DDX60-201ENST00000393743 SYTL4Q96C24 671 aaPredicted RBP8.76□□□□□ -1.01
DDX60-201ENST00000393743 CCDC43Q96MW1 224 aaKnown RBP8.76□□□□□ -1.01
DDX60-201ENST00000393743 NLRP2Q9NX02 1062 aa8.76□□□□□ -1.01
DDX60-201ENST00000393743 TSPYL4Q9UJ04 414 aa8.76□□□□□ -1.01
DDX60-201ENST00000393743 RPGRIP1LQ68CZ1 1315 aa8.76□□□□□ -1.01
DDX60-201ENST00000393743 MRC2Q9UBG0 1479 aa8.76□□□□□ -1.01
DDX60-201ENST00000393743 BECN2A8MW95 431 aa8.76□□□□□ -1.01
DDX60-201ENST00000393743 SF3B2Q13435 895 aaKnown RBP8.76□□□□□ -1.01
DDX60-201ENST00000393743 SYNJ1O43426 1573 aa8.75□□□□□ -1.01
DDX60-201ENST00000393743 XBP1P17861 261 aa8.75□□□□□ -1.01
DDX60-201ENST00000393743 SLKQ9H2G2 1235 aaPredicted RBP8.75□□□□□ -1.01
DDX60-201ENST00000393743 ARHGAP5Q13017 1502 aa8.75□□□□□ -1.01
DDX60-201ENST00000393743 APPP05067 770 aa8.75□□□□□ -1.01
DDX60-201ENST00000393743 GNAI3P08754 354 aa8.75□□□□□ -1.01
DDX60-201ENST00000393743 PROSER2Q86WR7 435 aaPredicted RBP8.75□□□□□ -1.01
DDX60-201ENST00000393743 BRMS1Q9HCU9 246 aa8.75□□□□□ -1.01
DDX60-201ENST00000393743 IPO9Q96P70 1041 aaKnown RBP8.75□□□□□ -1.01
DDX60-201ENST00000393743 EFCAB5A4FU69 1503 aa8.75□□□□□ -1.01
DDX60-201ENST00000393743 NLRP6P59044 892 aa8.75□□□□□ -1.01
DDX60-201ENST00000393743 RIC3Q7Z5B4 369 aa8.75□□□□□ -1.01
DDX60-201ENST00000393743 TXNDC2Q86VQ3 553 aa8.74□□□□□ -1.01
DDX60-201ENST00000393743 HIP1O00291 1037 aa8.74□□□□□ -1.01
DDX60-201ENST00000393743 DHX16O60231 1041 aaKnown RBP8.74□□□□□ -1.01
DDX60-201ENST00000393743 RRP7AQ9Y3A4 280 aaKnown RBP8.74□□□□□ -1.01
DDX60-201ENST00000393743 INTS3Q68E01 1043 aaKnown RBP8.74□□□□□ -1.01
DDX60-201ENST00000393743 RALYLQ86SE5 291 aaKnown RBP8.74□□□□□ -1.01
DDX60-201ENST00000393743 CNTLNQ9NXG0 1405 aa8.74□□□□□ -1.01
DDX60-201ENST00000393743 SLC3A2P08195 630 aaKnown RBP8.74□□□□□ -1.01
DDX60-201ENST00000393743 NINLQ9Y2I6 1382 aa8.74□□□□□ -1.01
DDX60-201ENST00000393743 TBC1D2BQ9UPU7 963 aa8.74□□□□□ -1.01
DDX60-201ENST00000393743 CCDC30Q5VVM6 783 aa8.73□□□□□ -1.01
DDX60-201ENST00000393743 ELL2O00472 640 aaPredicted RBP8.73□□□□□ -1.01
DDX60-201ENST00000393743 KIF6Q6ZMV9 814 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms