RNA–Protein interactions for RNA: ENST00000393648.6

FGFR4-203, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FGFR4, Length 2,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-203ENST00000393648 ABCC3O15438 1527 aa23.7■■□□□ 1.38
FGFR4-203ENST00000393648 MADDQ8WXG6 1647 aa23.7■■□□□ 1.38
FGFR4-203ENST00000393648 HNRNPUQ00839 825 aaKnown RBP eCLIP23.69■■□□□ 1.38
FGFR4-203ENST00000393648 NUTM2DQ5VT03 806 aaPredicted RBP23.68■■□□□ 1.38
FGFR4-203ENST00000393648 SENP3Q9H4L4 574 aaPredicted RBP23.66■■□□□ 1.38
FGFR4-203ENST00000393648 STAC3Q96MF2 364 aa23.65■■□□□ 1.38
FGFR4-203ENST00000393648 TMF1P82094 1093 aa23.63■■□□□ 1.37
FGFR4-203ENST00000393648 NBR1Q14596 966 aa23.63■■□□□ 1.37
FGFR4-203ENST00000393648 NOS1P29475 1434 aa23.62■■□□□ 1.37
FGFR4-203ENST00000393648 MROH2AA6NES4 1674 aa23.62■■□□□ 1.37
FGFR4-203ENST00000393648 MLECQ14165 292 aa23.62■■□□□ 1.37
FGFR4-203ENST00000393648 KIF1BO60333 1816 aa23.61■■□□□ 1.37
FGFR4-203ENST00000393648 COL17A1Q9UMD9 1497 aaPredicted RBP23.61■■□□□ 1.37
FGFR4-203ENST00000393648 LAMC1P11047 1609 aa23.61■■□□□ 1.37
FGFR4-203ENST00000393648 IDI1Q13907 227 aa23.6■■□□□ 1.37
FGFR4-203ENST00000393648 FBXO31Q5XUX0 539 aaPredicted RBP23.6■■□□□ 1.37
FGFR4-203ENST00000393648 CAMSAP1Q5T5Y3 1602 aa23.59■■□□□ 1.37
FGFR4-203ENST00000393648 SIGLEC1Q9BZZ2 1709 aa23.58■■□□□ 1.37
FGFR4-203ENST00000393648 PANK3Q9H999 370 aa23.57■■□□□ 1.36
FGFR4-203ENST00000393648 SCAF11Q99590 1463 aaKnown RBP23.57■■□□□ 1.36
FGFR4-203ENST00000393648 ADGRB3O60242 1522 aa23.56■■□□□ 1.36
FGFR4-203ENST00000393648 SENP3-EIF4A1A0A087X0R7 540 aa23.55■■□□□ 1.36
FGFR4-203ENST00000393648 TMEM132EQ6IEE7 984 aa23.55■■□□□ 1.36
FGFR4-203ENST00000393648 ZMYM4Q5VZL5 1548 aa23.55■■□□□ 1.36
FGFR4-203ENST00000393648 PER1O15534 1290 aaPredicted RBP23.55■■□□□ 1.36
FGFR4-203ENST00000393648 MYOM2P54296 1465 aa23.54■■□□□ 1.36
FGFR4-203ENST00000393648 NEURL4Q96JN8 1562 aa23.53■■□□□ 1.36
FGFR4-203ENST00000393648 CC2D1BQ5T0F9 858 aaKnown RBP23.53■■□□□ 1.36
FGFR4-203ENST00000393648 SYNMO15061 1565 aa23.52■■□□□ 1.36
FGFR4-203ENST00000393648 KIF13AQ9H1H9 1805 aa23.52■■□□□ 1.36
FGFR4-203ENST00000393648 SALL2Q9Y467 1007 aaPredicted RBP23.51■■□□□ 1.35
FGFR4-203ENST00000393648 IQGAP1P46940 1657 aa23.51■■□□□ 1.35
FGFR4-203ENST00000393648 TRAK1Q9UPV9 953 aa23.51■■□□□ 1.35
FGFR4-203ENST00000393648 TMC1Q8TDI8 760 aa23.5■■□□□ 1.35
FGFR4-203ENST00000393648 ARHGAP31Q2M1Z3 1444 aa23.49■■□□□ 1.35
FGFR4-203ENST00000393648 IFT172Q9UG01 1749 aa23.48■■□□□ 1.35
FGFR4-203ENST00000393648 C14orf93Q9H972 538 aaKnown RBP23.47■■□□□ 1.35
FGFR4-203ENST00000393648 NRXN1Q9ULB1 1477 aa23.47■■□□□ 1.35
FGFR4-203ENST00000393648 EIF3AQ14152 1382 aaKnown RBP23.46■■□□□ 1.35
FGFR4-203ENST00000393648 SLC52A1Q9NWF4 448 aa23.46■■□□□ 1.35
FGFR4-203ENST00000393648 PIK3C2GO75747 1445 aa23.45■■□□□ 1.34
FGFR4-203ENST00000393648 RALBP1Q15311 655 aa23.45■■□□□ 1.34
FGFR4-203ENST00000393648 RPGRIP1LQ68CZ1 1315 aa23.45■■□□□ 1.34
FGFR4-203ENST00000393648 CCDC136Q96JN2 1154 aa23.45■■□□□ 1.34
FGFR4-203ENST00000393648 MYBBP1AQ9BQG0 1328 aaKnown RBP23.44■■□□□ 1.34
FGFR4-203ENST00000393648 KTN1Q86UP2 1357 aaKnown RBP23.43■■□□□ 1.34
FGFR4-203ENST00000393648 VGFO15240 615 aaPredicted RBP23.43■■□□□ 1.34
FGFR4-203ENST00000393648 PAK3O75914 559 aaPredicted RBP23.43■■□□□ 1.34
FGFR4-203ENST00000393648 PNISRQ8TF01 805 aaKnown RBP23.43■■□□□ 1.34
FGFR4-203ENST00000393648 NOP58Q9Y2X3 529 aaKnown RBP23.42■■□□□ 1.34
FGFR4-203ENST00000393648 KIAA1210Q9ULL0 1709 aa23.42■■□□□ 1.34
FGFR4-203ENST00000393648 ZC3H13Q5T200 1668 aaKnown RBP23.42■■□□□ 1.34
FGFR4-203ENST00000393648 PPLO60437 1756 aa23.42■■□□□ 1.34
FGFR4-203ENST00000393648 PIK3C2BO00750 1634 aa23.41■■□□□ 1.34
FGFR4-203ENST00000393648 STAG3Q9UJ98 1225 aa23.4■■□□□ 1.34
FGFR4-203ENST00000393648 CDCA8Q53HL2 280 aa23.4■■□□□ 1.34
FGFR4-203ENST00000393648 PARD3Q8TEW0 1356 aa23.39■■□□□ 1.33
FGFR4-203ENST00000393648 CENPJQ9HC77 1338 aaPredicted RBP23.38■■□□□ 1.33
FGFR4-203ENST00000393648 B4GALNT3Q6L9W6 998 aa23.38■■□□□ 1.33
FGFR4-203ENST00000393648 KNSTRNQ9Y448 316 aa23.38■■□□□ 1.33
FGFR4-203ENST00000393648 PREX1Q8TCU6 1659 aa23.37■■□□□ 1.33
FGFR4-203ENST00000393648 NEXMIFQ5QGS0 1516 aa23.37■■□□□ 1.33
FGFR4-203ENST00000393648 RTN4Q9NQC3 1192 aaKnown RBP23.37■■□□□ 1.33
FGFR4-203ENST00000393648 SAFB2Q14151 953 aaKnown RBP eCLIP23.36■■□□□ 1.33
FGFR4-203ENST00000393648 STK26Q9P289 416 aa23.36■■□□□ 1.33
FGFR4-203ENST00000393648 AGLP35573 1532 aa23.36■■□□□ 1.33
FGFR4-203ENST00000393648 ERVK-7P63135 1459 aa23.35■■□□□ 1.33
FGFR4-203ENST00000393648 NLRP13Q86W25 1043 aa23.35■■□□□ 1.33
FGFR4-203ENST00000393648 PPP4R2Q9NY27 417 aa23.35■■□□□ 1.33
FGFR4-203ENST00000393648 ESF1Q9H501 851 aaKnown RBP23.34■■□□□ 1.33
FGFR4-203ENST00000393648 BRD4O60885 1362 aaPredicted RBP23.34■■□□□ 1.33
FGFR4-203ENST00000393648 ADGRB1O14514 1584 aa23.34■■□□□ 1.33
FGFR4-203ENST00000393648 CLTCQ00610 1675 aaKnown RBP23.34■■□□□ 1.33
FGFR4-203ENST00000393648 ZBED9Q6R2W3 1325 aa23.33■■□□□ 1.33
FGFR4-203ENST00000393648 PPP6R1Q9UPN7 881 aa23.33■■□□□ 1.33
FGFR4-203ENST00000393648 REREQ9P2R6 1566 aa23.33■■□□□ 1.33
FGFR4-203ENST00000393648 MYO5BQ9ULV0 1848 aa23.33■■□□□ 1.32
FGFR4-203ENST00000393648 IL27Q8NEV9 243 aa23.32■■□□□ 1.32
FGFR4-203ENST00000393648 TRHP20396 242 aaPredicted RBP23.32■■□□□ 1.32
FGFR4-203ENST00000393648 ARHGEF40Q8TER5 1519 aa23.31■■□□□ 1.32
FGFR4-203ENST00000393648 AMER1Q5JTC6 1135 aaPredicted RBP23.31■■□□□ 1.32
FGFR4-203ENST00000393648 SETBP1Q9Y6X0 1596 aa23.3■■□□□ 1.32
FGFR4-203ENST00000393648 TMEM131LA2VDJ0 1609 aa23.3■■□□□ 1.32
FGFR4-203ENST00000393648 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.28■■□□□ 1.32
FGFR4-203ENST00000393648 ZMYM3Q14202 1370 aa23.28■■□□□ 1.32
FGFR4-203ENST00000393648 CARD14Q9BXL6 1004 aa23.27■■□□□ 1.32
FGFR4-203ENST00000393648 RTL5Q5HYW3 569 aaPredicted RBP23.27■■□□□ 1.32
FGFR4-203ENST00000393648 ERICH6BQ5W0A0 696 aa23.26■■□□□ 1.31
FGFR4-203ENST00000393648 SLC12A5Q9H2X9 1139 aa23.26■■□□□ 1.31
FGFR4-203ENST00000393648 SLC24A1O60721 1099 aa23.25■■□□□ 1.31
FGFR4-203ENST00000393648 PLPPR3Q6T4P5 718 aa23.24■■□□□ 1.31
FGFR4-203ENST00000393648 LRPPRCP42704 1394 aaKnown RBP23.24■■□□□ 1.31
FGFR4-203ENST00000393648 MYOM1P52179 1685 aa23.24■■□□□ 1.31
FGFR4-203ENST00000393648 SBNO2Q9Y2G9 1366 aa23.24■■□□□ 1.31
FGFR4-203ENST00000393648 KDM5AP29375 1690 aaKnown RBP23.24■■□□□ 1.31
FGFR4-203ENST00000393648 ZFYVE9O95405 1425 aa23.23■■□□□ 1.31
FGFR4-203ENST00000393648 PPP2R1AP30153 589 aa23.22■■□□□ 1.31
FGFR4-203ENST00000393648 CEBPAP49715 358 aaPredicted RBP23.2■■□□□ 1.3
FGFR4-203ENST00000393648 CABP2Q9NPB3 220 aa23.2■■□□□ 1.3
FGFR4-203ENST00000393648 MYO3AQ8NEV4 1616 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms