RNA–Protein interactions for RNA: ENST00000393448.6

RUFY1-203, Transcript of RUN and FYVE domain containing 1, humanhuman

TSL 1 (best)

Gene RUFY1, Length 2,320 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-203ENST00000393448 REREQ9P2R6 1566 aa24.21■■□□□ 1.47
RUFY1-203ENST00000393448 DISP3Q9P2K9 1392 aa24.2■■□□□ 1.46
RUFY1-203ENST00000393448 IQGAP1P46940 1657 aa24.2■■□□□ 1.46
RUFY1-203ENST00000393448 PIK3C2BO00750 1634 aa24.19■■□□□ 1.46
RUFY1-203ENST00000393448 CCDC184Q52MB2 194 aa24.18■■□□□ 1.46
RUFY1-203ENST00000393448 ARHGEF40Q8TER5 1519 aa24.18■■□□□ 1.46
RUFY1-203ENST00000393448 FBXO31Q5XUX0 539 aaPredicted RBP24.18■■□□□ 1.46
RUFY1-203ENST00000393448 GTF3C3Q9Y5Q9 886 aa24.17■■□□□ 1.46
RUFY1-203ENST00000393448 AGLP35573 1532 aa24.17■■□□□ 1.46
RUFY1-203ENST00000393448 PPLO60437 1756 aa24.17■■□□□ 1.46
RUFY1-203ENST00000393448 PREX1Q8TCU6 1659 aa24.17■■□□□ 1.46
RUFY1-203ENST00000393448 IDI1Q13907 227 aa24.16■■□□□ 1.46
RUFY1-203ENST00000393448 KIAA1210Q9ULL0 1709 aa24.16■■□□□ 1.46
RUFY1-203ENST00000393448 NUTM2DQ5VT03 806 aaPredicted RBP24.16■■□□□ 1.46
RUFY1-203ENST00000393448 SCAF11Q99590 1463 aaKnown RBP24.15■■□□□ 1.46
RUFY1-203ENST00000393448 NRXN1Q9ULB1 1477 aa24.15■■□□□ 1.46
RUFY1-203ENST00000393448 CLTCQ00610 1675 aaKnown RBP24.14■■□□□ 1.45
RUFY1-203ENST00000393448 TMF1P82094 1093 aa24.1■■□□□ 1.45
RUFY1-203ENST00000393448 MYO5BQ9ULV0 1848 aa24.1■■□□□ 1.45
RUFY1-203ENST00000393448 SLC52A1Q9NWF4 448 aa24.09■■□□□ 1.45
RUFY1-203ENST00000393448 PIK3C2GO75747 1445 aa24.08■■□□□ 1.45
RUFY1-203ENST00000393448 SENP3Q9H4L4 574 aaPredicted RBP24.07■■□□□ 1.44
RUFY1-203ENST00000393448 RPGRIP1LQ68CZ1 1315 aa24.07■■□□□ 1.44
RUFY1-203ENST00000393448 ERVK-7P63135 1459 aa24.07■■□□□ 1.44
RUFY1-203ENST00000393448 NEXMIFQ5QGS0 1516 aa24.07■■□□□ 1.44
RUFY1-203ENST00000393448 MYT1Q01538 1121 aa24.06■■□□□ 1.44
RUFY1-203ENST00000393448 MRS2Q9HD23 443 aa24.05■■□□□ 1.44
RUFY1-203ENST00000393448 PPP6R1Q9UPN7 881 aa24.05■■□□□ 1.44
RUFY1-203ENST00000393448 TRHP20396 242 aaPredicted RBP24.05■■□□□ 1.44
RUFY1-203ENST00000393448 TMEM132EQ6IEE7 984 aa24.04■■□□□ 1.44
RUFY1-203ENST00000393448 C14orf93Q9H972 538 aaKnown RBP24.04■■□□□ 1.44
RUFY1-203ENST00000393448 TMEM131LA2VDJ0 1609 aa24.04■■□□□ 1.44
RUFY1-203ENST00000393448 EIF3AQ14152 1382 aaKnown RBP24.03■■□□□ 1.44
RUFY1-203ENST00000393448 VGFO15240 615 aaPredicted RBP24■■□□□ 1.43
RUFY1-203ENST00000393448 SETBP1Q9Y6X0 1596 aa23.99■■□□□ 1.43
RUFY1-203ENST00000393448 FAM9BQ8IZU0 186 aa23.99■■□□□ 1.43
RUFY1-203ENST00000393448 PANK3Q9H999 370 aa23.99■■□□□ 1.43
RUFY1-203ENST00000393448 TRAK1Q9UPV9 953 aa23.99■■□□□ 1.43
RUFY1-203ENST00000393448 ADGRB1O14514 1584 aa23.99■■□□□ 1.43
RUFY1-203ENST00000393448 PER1O15534 1290 aaPredicted RBP23.98■■□□□ 1.43
RUFY1-203ENST00000393448 ESF1Q9H501 851 aaKnown RBP23.97■■□□□ 1.43
RUFY1-203ENST00000393448 STAG3Q9UJ98 1225 aa23.96■■□□□ 1.43
RUFY1-203ENST00000393448 SPATA31D1Q6ZQQ2 1576 aa23.95■■□□□ 1.43
RUFY1-203ENST00000393448 HNRNPUQ00839 825 aaKnown RBP eCLIP23.95■■□□□ 1.43
RUFY1-203ENST00000393448 ZMYM3Q14202 1370 aa23.95■■□□□ 1.42
RUFY1-203ENST00000393448 MYO3AQ8NEV4 1616 aa23.91■■□□□ 1.42
RUFY1-203ENST00000393448 CENPJQ9HC77 1338 aaPredicted RBP23.91■■□□□ 1.42
RUFY1-203ENST00000393448 ZFYVE9O95405 1425 aa23.91■■□□□ 1.42
RUFY1-203ENST00000393448 CDCA8Q53HL2 280 aa23.9■■□□□ 1.42
RUFY1-203ENST00000393448 CC2D1BQ5T0F9 858 aaKnown RBP23.9■■□□□ 1.42
RUFY1-203ENST00000393448 MYOM1P52179 1685 aa23.89■■□□□ 1.42
RUFY1-203ENST00000393448 KDM5AP29375 1690 aaKnown RBP23.89■■□□□ 1.41
RUFY1-203ENST00000393448 KTN1Q86UP2 1357 aaKnown RBP23.88■■□□□ 1.41
RUFY1-203ENST00000393448 A2ML1A8K2U0 1454 aa23.88■■□□□ 1.41
RUFY1-203ENST00000393448 RALBP1Q15311 655 aa23.88■■□□□ 1.41
RUFY1-203ENST00000393448 QRICH2Q9H0J4 1663 aa23.87■■□□□ 1.41
RUFY1-203ENST00000393448 MYBBP1AQ9BQG0 1328 aaKnown RBP23.86■■□□□ 1.41
RUFY1-203ENST00000393448 ASXL1Q8IXJ9 1541 aa23.86■■□□□ 1.41
RUFY1-203ENST00000393448 PARD3Q8TEW0 1356 aa23.86■■□□□ 1.41
RUFY1-203ENST00000393448 TMC1Q8TDI8 760 aa23.84■■□□□ 1.41
RUFY1-203ENST00000393448 STK26Q9P289 416 aa23.84■■□□□ 1.41
RUFY1-203ENST00000393448 SBNO2Q9Y2G9 1366 aa23.83■■□□□ 1.41
RUFY1-203ENST00000393448 ARHGEF28Q8N1W1 1705 aaKnown RBP23.83■■□□□ 1.41
RUFY1-203ENST00000393448 SAFB2Q14151 953 aaKnown RBP eCLIP23.81■■□□□ 1.4
RUFY1-203ENST00000393448 RIMS2Q9UQ26 1411 aa23.8■■□□□ 1.4
RUFY1-203ENST00000393448 CEBPAP49715 358 aaPredicted RBP23.8■■□□□ 1.4
RUFY1-203ENST00000393448 KNSTRNQ9Y448 316 aa23.8■■□□□ 1.4
RUFY1-203ENST00000393448 SLC24A1O60721 1099 aa23.79■■□□□ 1.4
RUFY1-203ENST00000393448 PNISRQ8TF01 805 aaKnown RBP23.79■■□□□ 1.4
RUFY1-203ENST00000393448 TNRQ92752 1358 aa23.79■■□□□ 1.4
RUFY1-203ENST00000393448 ALKQ9UM73 1620 aa23.79■■□□□ 1.4
RUFY1-203ENST00000393448 PLPPR3Q6T4P5 718 aa23.78■■□□□ 1.4
RUFY1-203ENST00000393448 BRD4O60885 1362 aaPredicted RBP23.78■■□□□ 1.4
RUFY1-203ENST00000393448 SENP3-EIF4A1A0A087X0R7 540 aa23.76■■□□□ 1.39
RUFY1-203ENST00000393448 AMER1Q5JTC6 1135 aaPredicted RBP23.76■■□□□ 1.39
RUFY1-203ENST00000393448 NLRP13Q86W25 1043 aa23.76■■□□□ 1.39
RUFY1-203ENST00000393448 YTHDC2Q9H6S0 1430 aaKnown RBP23.74■■□□□ 1.39
RUFY1-203ENST00000393448 CARD14Q9BXL6 1004 aa23.72■■□□□ 1.39
RUFY1-203ENST00000393448 TULP4Q9NRJ4 1543 aa23.72■■□□□ 1.39
RUFY1-203ENST00000393448 PTPRMP28827 1452 aa23.72■■□□□ 1.39
RUFY1-203ENST00000393448 PRAM1Q96QH2 718 aa23.71■■□□□ 1.39
RUFY1-203ENST00000393448 SLC12A5Q9H2X9 1139 aa23.71■■□□□ 1.39
RUFY1-203ENST00000393448 UBR1Q8IWV7 1749 aa23.7■■□□□ 1.38
RUFY1-203ENST00000393448 FER1L4A9Z1Z3 1794 aa23.69■■□□□ 1.38
RUFY1-203ENST00000393448 C3P01024 1663 aa23.69■■□□□ 1.38
RUFY1-203ENST00000393448 CABP2Q9NPB3 220 aa23.68■■□□□ 1.38
RUFY1-203ENST00000393448 ZBED9Q6R2W3 1325 aa23.68■■□□□ 1.38
RUFY1-203ENST00000393448 EVC2Q86UK5 1308 aa23.68■■□□□ 1.38
RUFY1-203ENST00000393448 SETD1AO15047 1707 aaKnown RBP23.68■■□□□ 1.38
RUFY1-203ENST00000393448 NRXN3Q9Y4C0 1643 aa23.67■■□□□ 1.38
RUFY1-203ENST00000393448 MINK1Q8N4C8 1332 aaPredicted RBP23.67■■□□□ 1.38
RUFY1-203ENST00000393448 LRPPRCP42704 1394 aaKnown RBP23.67■■□□□ 1.38
RUFY1-203ENST00000393448 POGKQ9P215 609 aa23.67■■□□□ 1.38
RUFY1-203ENST00000393448 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.65■■□□□ 1.38
RUFY1-203ENST00000393448 PPP2R1AP30153 589 aa23.64■■□□□ 1.38
RUFY1-203ENST00000393448 TMEM2Q9UHN6 1383 aa23.64■■□□□ 1.37
RUFY1-203ENST00000393448 BCANQ96GW7 911 aa23.62■■□□□ 1.37
RUFY1-203ENST00000393448 SUPT16HQ9Y5B9 1047 aaKnown RBP23.62■■□□□ 1.37
RUFY1-203ENST00000393448 METP08581 1390 aa23.62■■□□□ 1.37
RUFY1-203ENST00000393448 WAPLQ7Z5K2 1190 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms