RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 MIER1Q8N108 512 aa10.43□□□□□ -0.74
ATXN3-203ENST00000393287 NLRP13Q86W25 1043 aa10.43□□□□□ -0.74
ATXN3-203ENST00000393287 LAS1LQ9Y4W2 734 aaKnown RBP10.43□□□□□ -0.74
ATXN3-203ENST00000393287 ZFYVE16Q7Z3T8 1539 aa10.43□□□□□ -0.74
ATXN3-203ENST00000393287 MYBBP1AQ9BQG0 1328 aaKnown RBP10.43□□□□□ -0.74
ATXN3-203ENST00000393287 FKBP8Q14318 412 aa10.42□□□□□ -0.74
ATXN3-203ENST00000393287 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.42□□□□□ -0.74
ATXN3-203ENST00000393287 MLH3Q9UHC1 1453 aa10.42□□□□□ -0.74
ATXN3-203ENST00000393287 CCDC9Q9Y3X0 531 aaKnown RBP10.41□□□□□ -0.74
ATXN3-203ENST00000393287 PDE3BQ13370 1112 aa10.41□□□□□ -0.74
ATXN3-203ENST00000393287 TMX4Q9H1E5 349 aaPredicted RBP10.41□□□□□ -0.74
ATXN3-203ENST00000393287 MEX3CQ5U5Q3 659 aaKnown RBP10.41□□□□□ -0.74
ATXN3-203ENST00000393287 RIMBP3CA6NJZ7 1639 aa10.41□□□□□ -0.74
ATXN3-203ENST00000393287 RIMBP3BA6NNM3 1639 aa10.41□□□□□ -0.74
ATXN3-203ENST00000393287 RIMBP3Q9UFD9 1639 aa10.41□□□□□ -0.74
ATXN3-203ENST00000393287 UHRF1BP1Q6BDS2 1440 aa10.4□□□□□ -0.74
ATXN3-203ENST00000393287 ATP7AQ04656 1500 aa10.4□□□□□ -0.74
ATXN3-203ENST00000393287 U2AF1L5P0DN76 240 aaPredicted RBP10.4□□□□□ -0.74
ATXN3-203ENST00000393287 U2AF1Q01081 240 aaKnown RBP eCLIP10.4□□□□□ -0.74
ATXN3-203ENST00000393287 ARAP3Q8WWN8 1544 aa10.4□□□□□ -0.75
ATXN3-203ENST00000393287 HSP90AA1P07900 732 aaKnown RBP10.4□□□□□ -0.75
ATXN3-203ENST00000393287 ARXQ96QS3 562 aa10.4□□□□□ -0.75
ATXN3-203ENST00000393287 EVA1CP58658 441 aa10.39□□□□□ -0.75
ATXN3-203ENST00000393287 PRAM1Q96QH2 718 aa10.39□□□□□ -0.75
ATXN3-203ENST00000393287 YEATS2Q9ULM3 1422 aa10.39□□□□□ -0.75
ATXN3-203ENST00000393287 ZNF692Q9BU19 519 aaPredicted RBP10.39□□□□□ -0.75
ATXN3-203ENST00000393287 ESCO1Q5FWF5 840 aa10.38□□□□□ -0.75
ATXN3-203ENST00000393287 SMG6Q86US8 1419 aaKnown RBP10.38□□□□□ -0.75
ATXN3-203ENST00000393287 C1orf141Q5JVX7 400 aa10.38□□□□□ -0.75
ATXN3-203ENST00000393287 BCL11AQ9H165 835 aa10.38□□□□□ -0.75
ATXN3-203ENST00000393287 HSPA2P54652 639 aa10.38□□□□□ -0.75
ATXN3-203ENST00000393287 STK31Q9BXU1 1019 aa10.37□□□□□ -0.75
ATXN3-203ENST00000393287 AMOTL2Q9Y2J4 779 aa10.37□□□□□ -0.75
ATXN3-203ENST00000393287 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.37□□□□□ -0.75
ATXN3-203ENST00000393287 ATAD2Q6PL18 1390 aa10.37□□□□□ -0.75
ATXN3-203ENST00000393287 NEUROD2Q15784 382 aa10.37□□□□□ -0.75
ATXN3-203ENST00000393287 WASHC2AQ641Q2 1341 aa10.37□□□□□ -0.75
ATXN3-203ENST00000393287 PTPRKQ15262 1439 aa10.37□□□□□ -0.75
ATXN3-203ENST00000393287 MBD5Q9P267 1494 aa10.37□□□□□ -0.75
ATXN3-203ENST00000393287 ERICH6BQ5W0A0 696 aa10.36□□□□□ -0.75
ATXN3-203ENST00000393287 ADGRL2O95490 1459 aa10.36□□□□□ -0.75
ATXN3-203ENST00000393287 CADPS2Q86UW7 1296 aa10.36□□□□□ -0.75
ATXN3-203ENST00000393287 TOM1O60784 492 aa10.36□□□□□ -0.75
ATXN3-203ENST00000393287 ZCCHC11Q5TAX3 1644 aaKnown RBP10.35□□□□□ -0.75
ATXN3-203ENST00000393287 SHROOM2Q13796 1616 aa10.35□□□□□ -0.75
ATXN3-203ENST00000393287 OS9Q13438 667 aaPredicted RBP10.35□□□□□ -0.75
ATXN3-203ENST00000393287 PANK3Q9H999 370 aa10.35□□□□□ -0.75
ATXN3-203ENST00000393287 DDRGK1Q96HY6 314 aa10.35□□□□□ -0.75
ATXN3-203ENST00000393287 TBX22Q9Y458 520 aa10.34□□□□□ -0.75
ATXN3-203ENST00000393287 LRPPRCP42704 1394 aaKnown RBP10.34□□□□□ -0.75
ATXN3-203ENST00000393287 GOLGA2Q08379 1002 aa10.34□□□□□ -0.75
ATXN3-203ENST00000393287 C14orf93Q9H972 538 aaKnown RBP10.34□□□□□ -0.75
ATXN3-203ENST00000393287 NBPF1Q3BBV0 1214 aa10.33□□□□□ -0.76
ATXN3-203ENST00000393287 BECN1Q14457 450 aa10.33□□□□□ -0.76
ATXN3-203ENST00000393287 RIMS2Q9UQ26 1411 aa10.33□□□□□ -0.76
ATXN3-203ENST00000393287 NLRP6P59044 892 aa10.32□□□□□ -0.76
ATXN3-203ENST00000393287 NINLQ9Y2I6 1382 aa10.32□□□□□ -0.76
ATXN3-203ENST00000393287 DIAPH1O60610 1272 aaKnown RBP10.32□□□□□ -0.76
ATXN3-203ENST00000393287 CABP2Q9NPB3 220 aa10.32□□□□□ -0.76
ATXN3-203ENST00000393287 ADGRF5Q8IZF2 1346 aa10.32□□□□□ -0.76
ATXN3-203ENST00000393287 CCDC61Q9Y6R9 512 aa10.31□□□□□ -0.76
ATXN3-203ENST00000393287 ARHGEF5Q12774 1597 aa10.31□□□□□ -0.76
ATXN3-203ENST00000393287 NOS1P29475 1434 aa10.31□□□□□ -0.76
ATXN3-203ENST00000393287 PIP4K2BP78356 416 aa10.31□□□□□ -0.76
ATXN3-203ENST00000393287 KDM6BO15054 1643 aa10.31□□□□□ -0.76
ATXN3-203ENST00000393287 CDK19Q9BWU1 502 aa10.3□□□□□ -0.76
ATXN3-203ENST00000393287 ABCC1P33527 1531 aa10.3□□□□□ -0.76
ATXN3-203ENST00000393287 MSH6P52701 1360 aa10.3□□□□□ -0.76
ATXN3-203ENST00000393287 ADCY10Q96PN6 1610 aa10.3□□□□□ -0.76
ATXN3-203ENST00000393287 CCDC7Q96M83 1385 aa10.3□□□□□ -0.76
ATXN3-203ENST00000393287 UBAP1LF5GYI3 381 aa10.29□□□□□ -0.76
ATXN3-203ENST00000393287 HMMRO75330 724 aa10.29□□□□□ -0.76
ATXN3-203ENST00000393287 PPP4R2Q9NY27 417 aa10.29□□□□□ -0.76
ATXN3-203ENST00000393287 EIF2AK4Q9P2K8 1649 aaKnown RBP10.29□□□□□ -0.76
ATXN3-203ENST00000393287 TTC5Q8N0Z6 440 aa10.29□□□□□ -0.76
ATXN3-203ENST00000393287 FRAT1Q92837 279 aaPredicted RBP10.29□□□□□ -0.76
ATXN3-203ENST00000393287 ANP32BQ92688 251 aaKnown RBP10.29□□□□□ -0.76
ATXN3-203ENST00000393287 ABTB2Q8N961 1025 aa10.28□□□□□ -0.76
ATXN3-203ENST00000393287 GPATCH3Q96I76 525 aa10.28□□□□□ -0.76
ATXN3-203ENST00000393287 PHF8Q9UPP1 1060 aa10.28□□□□□ -0.76
ATXN3-203ENST00000393287 NCKAP5LQ9HCH0 1330 aa10.28□□□□□ -0.76
ATXN3-203ENST00000393287 TTC37Q6PGP7 1564 aa10.28□□□□□ -0.76
ATXN3-203ENST00000393287 DNMT1P26358 1616 aaKnown RBP10.28□□□□□ -0.76
ATXN3-203ENST00000393287 NBPF8Q3BBV2 869 aa10.28□□□□□ -0.76
ATXN3-203ENST00000393287 C19orf44Q9H6X5 657 aa10.28□□□□□ -0.76
ATXN3-203ENST00000393287 PHF23Q9BUL5 403 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-203ENST00000393287 KCNA6P17658 529 aa10.28□□□□□ -0.76
ATXN3-203ENST00000393287 PMFBP1Q8TBY8 1022 aa10.28□□□□□ -0.76
ATXN3-203ENST00000393287 LTV1Q96GA3 475 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-203ENST00000393287 TMEM2Q9UHN6 1383 aa10.27□□□□□ -0.76
ATXN3-203ENST00000393287 RAPGEF4Q8WZA2 1011 aa10.27□□□□□ -0.77
ATXN3-203ENST00000393287 NUDT16Q96DE0 195 aaKnown RBP10.27□□□□□ -0.77
ATXN3-203ENST00000393287 CABP1Q9NZU7 370 aa10.27□□□□□ -0.77
ATXN3-203ENST00000393287 MCCP23508 829 aa10.27□□□□□ -0.77
ATXN3-203ENST00000393287 E9PSI1 815 aa10.26□□□□□ -0.77
ATXN3-203ENST00000393287 TEFQ10587 303 aa10.26□□□□□ -0.77
ATXN3-203ENST00000393287 RPRD2Q5VT52 1461 aaKnown RBP10.26□□□□□ -0.77
ATXN3-203ENST00000393287 WAPLQ7Z5K2 1190 aa10.26□□□□□ -0.77
ATXN3-203ENST00000393287 SAMD9LQ8IVG5 1584 aa10.26□□□□□ -0.77
ATXN3-203ENST00000393287 WASLO00401 505 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms