RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 PANK1Q8TE04 598 aa9.08□□□□□ -0.96
NPHP1-203ENST00000393272 ZHX1Q9UKY1 873 aaPredicted RBP9.08□□□□□ -0.96
NPHP1-203ENST00000393272 CCDC173Q0VFZ6 552 aa9.07□□□□□ -0.96
NPHP1-203ENST00000393272 SMAP1Q8IYB5 467 aaPredicted RBP9.07□□□□□ -0.96
NPHP1-203ENST00000393272 TRPM1Q7Z4N2 1603 aa9.07□□□□□ -0.96
NPHP1-203ENST00000393272 PRDM10Q9NQV6 1147 aa9.07□□□□□ -0.96
NPHP1-203ENST00000393272 R3HCC1Q9Y3T6 440 aaKnown RBP9.07□□□□□ -0.96
NPHP1-203ENST00000393272 DNMBPQ6XZF7 1577 aa9.07□□□□□ -0.96
NPHP1-203ENST00000393272 SLC24A1O60721 1099 aa9.07□□□□□ -0.96
NPHP1-203ENST00000393272 TERF1P54274 439 aa9.07□□□□□ -0.96
NPHP1-203ENST00000393272 PPP1R9BQ96SB3 815 aa9.07□□□□□ -0.96
NPHP1-203ENST00000393272 ZMYM3Q14202 1370 aa9.06□□□□□ -0.96
NPHP1-203ENST00000393272 MSNP26038 577 aaKnown RBP9.06□□□□□ -0.96
NPHP1-203ENST00000393272 PDE3AQ14432 1141 aa9.06□□□□□ -0.96
NPHP1-203ENST00000393272 CCDC146Q8IYE0 955 aa9.06□□□□□ -0.96
NPHP1-203ENST00000393272 C22orf23Q9BZE7 217 aa9.06□□□□□ -0.96
NPHP1-203ENST00000393272 WDR62O43379 1518 aa9.06□□□□□ -0.96
NPHP1-203ENST00000393272 NCOA3Q9Y6Q9 1424 aa9.06□□□□□ -0.96
NPHP1-203ENST00000393272 NASPP49321 788 aaPredicted RBP9.06□□□□□ -0.96
NPHP1-203ENST00000393272 TNPO1Q92973 898 aaKnown RBP9.06□□□□□ -0.96
NPHP1-203ENST00000393272 PDZRN3Q9UPQ7 1066 aa9.06□□□□□ -0.96
NPHP1-203ENST00000393272 DDIT3P35638 169 aa9.05□□□□□ -0.96
NPHP1-203ENST00000393272 MFAP1P55081 439 aaKnown RBP9.05□□□□□ -0.96
NPHP1-203ENST00000393272 KDM5DQ9BY66 1539 aa9.05□□□□□ -0.96
NPHP1-203ENST00000393272 UQCRHLA0A096LP55 91 aa9.05□□□□□ -0.96
NPHP1-203ENST00000393272 UQCRHP07919 91 aa9.05□□□□□ -0.96
NPHP1-203ENST00000393272 CANXP27824 592 aaKnown RBP9.05□□□□□ -0.96
NPHP1-203ENST00000393272 PPP2R1AP30153 589 aa9.05□□□□□ -0.96
NPHP1-203ENST00000393272 NBPF1Q3BBV0 1214 aa9.05□□□□□ -0.96
NPHP1-203ENST00000393272 HSCBQ8IWL3 235 aa9.05□□□□□ -0.96
NPHP1-203ENST00000393272 DMRT2Q9Y5R5 561 aa9.05□□□□□ -0.96
NPHP1-203ENST00000393272 FANCD2Q9BXW9 1451 aa9.04□□□□□ -0.96
NPHP1-203ENST00000393272 TOPBP1Q92547 1522 aa9.04□□□□□ -0.96
NPHP1-203ENST00000393272 TESK2Q96S53 571 aa9.04□□□□□ -0.96
NPHP1-203ENST00000393272 PCDHB15Q9Y5E8 787 aa9.04□□□□□ -0.96
NPHP1-203ENST00000393272 LAMC3Q9Y6N6 1575 aa9.04□□□□□ -0.96
NPHP1-203ENST00000393272 PRAG1Q86YV5 1406 aa9.04□□□□□ -0.96
NPHP1-203ENST00000393272 CROCC2H7BZ55 1655 aa9.03□□□□□ -0.96
NPHP1-203ENST00000393272 NINLQ9Y2I6 1382 aa9.03□□□□□ -0.96
NPHP1-203ENST00000393272 APAF1O14727 1248 aa9.03□□□□□ -0.96
NPHP1-203ENST00000393272 PMFBP1Q8TBY8 1022 aa9.03□□□□□ -0.96
NPHP1-203ENST00000393272 NUP155O75694 1391 aa9.03□□□□□ -0.96
NPHP1-203ENST00000393272 ADGRL2O95490 1459 aa9.03□□□□□ -0.96
NPHP1-203ENST00000393272 XPCQ01831 940 aaPredicted RBP9.02□□□□□ -0.96
NPHP1-203ENST00000393272 GBP4Q96PP9 640 aa9.02□□□□□ -0.96
NPHP1-203ENST00000393272 ERBINQ96RT1 1412 aa9.02□□□□□ -0.96
NPHP1-203ENST00000393272 ANKRD50Q9ULJ7 1429 aa9.02□□□□□ -0.96
NPHP1-203ENST00000393272 PLXNC1O60486 1568 aa9.02□□□□□ -0.97
NPHP1-203ENST00000393272 CCDC144AA2RUR9 1427 aa9.02□□□□□ -0.97
NPHP1-203ENST00000393272 E9PSI1 815 aa9.02□□□□□ -0.97
NPHP1-203ENST00000393272 PDE4CQ08493 712 aa9.02□□□□□ -0.97
NPHP1-203ENST00000393272 SKOR2Q2VWA4 1001 aaPredicted RBP9.02□□□□□ -0.97
NPHP1-203ENST00000393272 ANP32BQ92688 251 aaKnown RBP9.02□□□□□ -0.97
NPHP1-203ENST00000393272 FAM135AQ9P2D6 1515 aa9.02□□□□□ -0.97
NPHP1-203ENST00000393272 PRDM15P57071 1507 aaPredicted RBP9.01□□□□□ -0.97
NPHP1-203ENST00000393272 MAGI2Q86UL8 1455 aa9.01□□□□□ -0.97
NPHP1-203ENST00000393272 ANKRD30AQ9BXX3 1397 aa9.01□□□□□ -0.97
NPHP1-203ENST00000393272 DMTNQ08495 405 aa9.01□□□□□ -0.97
NPHP1-203ENST00000393272 RAB3GAP1Q15042 981 aa9.01□□□□□ -0.97
NPHP1-203ENST00000393272 MTERF4Q7Z6M4 381 aaKnown RBP9.01□□□□□ -0.97
NPHP1-203ENST00000393272 TNNQ9UQP3 1299 aa9.01□□□□□ -0.97
NPHP1-203ENST00000393272 EIF4G3O43432 1585 aaKnown RBP9.01□□□□□ -0.97
NPHP1-203ENST00000393272 RLBP1P12271 317 aa9.01□□□□□ -0.97
NPHP1-203ENST00000393272 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.01□□□□□ -0.97
NPHP1-203ENST00000393272 ABCC2Q92887 1545 aa9□□□□□ -0.97
NPHP1-203ENST00000393272 GPRASP1Q5JY77 1395 aa9□□□□□ -0.97
NPHP1-203ENST00000393272 TDRD9Q8NDG6 1382 aaKnown RBP9□□□□□ -0.97
NPHP1-203ENST00000393272 ITSN2Q9NZM3 1697 aa9□□□□□ -0.97
NPHP1-203ENST00000393272 DYNC1I1O14576 645 aa9□□□□□ -0.97
NPHP1-203ENST00000393272 ZNF500O60304 480 aaPredicted RBP9□□□□□ -0.97
NPHP1-203ENST00000393272 ZSCAN20P17040 1043 aaPredicted RBP9□□□□□ -0.97
NPHP1-203ENST00000393272 UTP14CQ5TAP6 766 aaKnown RBP9□□□□□ -0.97
NPHP1-203ENST00000393272 SMC5Q8IY18 1101 aa9□□□□□ -0.97
NPHP1-203ENST00000393272 NOL7Q9UMY1 257 aaKnown RBP9□□□□□ -0.97
NPHP1-203ENST00000393272 SCAPERQ9BY12 1400 aa8.99□□□□□ -0.97
NPHP1-203ENST00000393272 LAMC1P11047 1609 aa8.99□□□□□ -0.97
NPHP1-203ENST00000393272 WDR7Q9Y4E6 1490 aa8.99□□□□□ -0.97
NPHP1-203ENST00000393272 TMF1P82094 1093 aa8.99□□□□□ -0.97
NPHP1-203ENST00000393272 AMER1Q5JTC6 1135 aaPredicted RBP8.99□□□□□ -0.97
NPHP1-203ENST00000393272 CIZ1Q9ULV3 898 aaPredicted RBP8.99□□□□□ -0.97
NPHP1-203ENST00000393272 KNSTRNQ9Y448 316 aa8.99□□□□□ -0.97
NPHP1-203ENST00000393272 IBTKQ9P2D0 1353 aaPredicted RBP8.99□□□□□ -0.97
NPHP1-203ENST00000393272 PIK3C2GO75747 1445 aa8.98□□□□□ -0.97
NPHP1-203ENST00000393272 HSP90AB1P08238 724 aaKnown RBP8.98□□□□□ -0.97
NPHP1-203ENST00000393272 HS1BP3Q53T59 392 aa8.98□□□□□ -0.97
NPHP1-203ENST00000393272 BBXQ8WY36 941 aaPredicted RBP8.98□□□□□ -0.97
NPHP1-203ENST00000393272 CCDC94Q9BW85 323 aaPredicted RBP8.98□□□□□ -0.97
NPHP1-203ENST00000393272 FOXD4L1Q9NU39 408 aa8.98□□□□□ -0.97
NPHP1-203ENST00000393272 CFDP1Q9UEE9 299 aaPredicted RBP8.98□□□□□ -0.97
NPHP1-203ENST00000393272 ZNF777Q9ULD5 760 aaPredicted RBP8.98□□□□□ -0.97
NPHP1-203ENST00000393272 AK9Q5TCS8 1911 aa8.97□□□□□ -0.97
NPHP1-203ENST00000393272 PTMSP20962 102 aa8.97□□□□□ -0.97
NPHP1-203ENST00000393272 RGL3Q3MIN7 710 aa8.97□□□□□ -0.97
NPHP1-203ENST00000393272 RWDD1Q9H446 243 aaPredicted RBP8.97□□□□□ -0.97
NPHP1-203ENST00000393272 IQGAP2Q13576 1575 aa8.97□□□□□ -0.97
NPHP1-203ENST00000393272 GTF2E1P29083 439 aaPredicted RBP8.97□□□□□ -0.97
NPHP1-203ENST00000393272 SNX21Q969T3 373 aa8.97□□□□□ -0.97
NPHP1-203ENST00000393272 BCL2L13Q9BXK5 485 aa8.97□□□□□ -0.97
NPHP1-203ENST00000393272 DDX49Q9Y6V7 483 aaKnown RBP8.97□□□□□ -0.97
NPHP1-203ENST00000393272 ABCC10Q5T3U5 1492 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms