RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 IDI1Q13907 227 aa15.61■□□□□ 0.09
PDGFD-202ENST00000393158 ARHGEF28Q8N1W1 1705 aaKnown RBP15.6■□□□□ 0.09
PDGFD-202ENST00000393158 PTPRMP28827 1452 aa15.59■□□□□ 0.09
PDGFD-202ENST00000393158 DCAF11Q8TEB1 546 aa15.57■□□□□ 0.08
PDGFD-202ENST00000393158 ADGRF5Q8IZF2 1346 aa15.57■□□□□ 0.08
PDGFD-202ENST00000393158 MLECQ14165 292 aa15.56■□□□□ 0.08
PDGFD-202ENST00000393158 MYOM1P52179 1685 aa15.55■□□□□ 0.08
PDGFD-202ENST00000393158 SLIT1O75093 1534 aa15.55■□□□□ 0.08
PDGFD-202ENST00000393158 NBPF1Q3BBV0 1214 aa15.55■□□□□ 0.08
PDGFD-202ENST00000393158 ARHGAP23Q9P227 1491 aa15.54■□□□□ 0.08
PDGFD-202ENST00000393158 C11orf95C9JLR9 678 aaPredicted RBP15.54■□□□□ 0.08
PDGFD-202ENST00000393158 RGL3Q3MIN7 710 aa15.54■□□□□ 0.08
PDGFD-202ENST00000393158 CEP170BQ9Y4F5 1589 aaPredicted RBP15.53■□□□□ 0.08
PDGFD-202ENST00000393158 ZNF316A6NFI3 1004 aaPredicted RBP15.53■□□□□ 0.08
PDGFD-202ENST00000393158 ALKQ9UM73 1620 aa15.52■□□□□ 0.08
PDGFD-202ENST00000393158 CEBPAP49715 358 aaPredicted RBP15.52■□□□□ 0.07
PDGFD-202ENST00000393158 NLRP1Q9C000 1473 aa15.52■□□□□ 0.07
PDGFD-202ENST00000393158 SLC52A1Q9NWF4 448 aa15.51■□□□□ 0.07
PDGFD-202ENST00000393158 KNDC1Q76NI1 1749 aa15.51■□□□□ 0.07
PDGFD-202ENST00000393158 HIRIP3Q9BW71 556 aaPredicted RBP15.5■□□□□ 0.07
PDGFD-202ENST00000393158 SETD1BQ9UPS6 1966 aaKnown RBP15.5■□□□□ 0.07
PDGFD-202ENST00000393158 QRICH2Q9H0J4 1663 aa15.5■□□□□ 0.07
PDGFD-202ENST00000393158 MED14O60244 1454 aa15.5■□□□□ 0.07
PDGFD-202ENST00000393158 TNRQ92752 1358 aa15.49■□□□□ 0.07
PDGFD-202ENST00000393158 HSPA5P11021 654 aaKnown RBP15.48■□□□□ 0.07
PDGFD-202ENST00000393158 KDM2AQ9Y2K7 1162 aa15.48■□□□□ 0.07
PDGFD-202ENST00000393158 USP47Q96K76 1375 aa15.48■□□□□ 0.07
PDGFD-202ENST00000393158 WASHC2AQ641Q2 1341 aa15.46■□□□□ 0.07
PDGFD-202ENST00000393158 ARID4BQ4LE39 1312 aaPredicted RBP15.46■□□□□ 0.06
PDGFD-202ENST00000393158 RPGRIP1LQ68CZ1 1315 aa15.45■□□□□ 0.06
PDGFD-202ENST00000393158 TESK2Q96S53 571 aa15.45■□□□□ 0.06
PDGFD-202ENST00000393158 ADAMTS13Q76LX8 1427 aa15.43■□□□□ 0.06
PDGFD-202ENST00000393158 ROCK2O75116 1388 aaKnown RBP15.43■□□□□ 0.06
PDGFD-202ENST00000393158 RIMS2Q9UQ26 1411 aa15.43■□□□□ 0.06
PDGFD-202ENST00000393158 SCAF11Q99590 1463 aaKnown RBP15.43■□□□□ 0.06
PDGFD-202ENST00000393158 STAC3Q96MF2 364 aa15.43■□□□□ 0.06
PDGFD-202ENST00000393158 TMEM2Q9UHN6 1383 aa15.42■□□□□ 0.06
PDGFD-202ENST00000393158 C14orf93Q9H972 538 aaKnown RBP15.42■□□□□ 0.06
PDGFD-202ENST00000393158 XRN1Q8IZH2 1706 aaKnown RBP15.42■□□□□ 0.06
PDGFD-202ENST00000393158 MYT1Q01538 1121 aa15.41■□□□□ 0.06
PDGFD-202ENST00000393158 CFAP70Q5T0N1 1121 aa15.41■□□□□ 0.06
PDGFD-202ENST00000393158 STRCQ7RTU9 1775 aa15.41■□□□□ 0.06
PDGFD-202ENST00000393158 KDM4FA0A1W2PPD8 638 aa15.4■□□□□ 0.06
PDGFD-202ENST00000393158 CHD2O14647 1828 aaKnown RBP15.4■□□□□ 0.06
PDGFD-202ENST00000393158 NUTM2DQ5VT03 806 aaPredicted RBP15.39■□□□□ 0.05
PDGFD-202ENST00000393158 CPS1P31327 1500 aa15.39■□□□□ 0.05
PDGFD-202ENST00000393158 STRCP1A6NGW2 1772 aa15.38■□□□□ 0.05
PDGFD-202ENST00000393158 TULP4Q9NRJ4 1543 aa15.38■□□□□ 0.05
PDGFD-202ENST00000393158 DISP3Q9P2K9 1392 aa15.38■□□□□ 0.05
PDGFD-202ENST00000393158 LTKP29376 864 aa15.38■□□□□ 0.05
PDGFD-202ENST00000393158 ZNF326Q5BKZ1 582 aaKnown RBP15.38■□□□□ 0.05
PDGFD-202ENST00000393158 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.37■□□□□ 0.05
PDGFD-202ENST00000393158 CCDC7Q96M83 1385 aa15.37■□□□□ 0.05
PDGFD-202ENST00000393158 KIF7Q2M1P5 1343 aa15.37■□□□□ 0.05
PDGFD-202ENST00000393158 DLC1Q96QB1 1528 aa15.37■□□□□ 0.05
PDGFD-202ENST00000393158 ST20-MTHFSA0A0A6YYL1 179 aa15.36■□□□□ 0.05
PDGFD-202ENST00000393158 EIF4G2P78344 907 aaKnown RBP eCLIP15.36■□□□□ 0.05
PDGFD-202ENST00000393158 PTPRUQ92729 1446 aa15.35■□□□□ 0.05
PDGFD-202ENST00000393158 CARD11Q9BXL7 1154 aa15.35■□□□□ 0.05
PDGFD-202ENST00000393158 METP08581 1390 aa15.35■□□□□ 0.05
PDGFD-202ENST00000393158 DIP2AQ14689 1571 aa15.35■□□□□ 0.05
PDGFD-202ENST00000393158 TECPR2O15040 1411 aa15.34■□□□□ 0.05
PDGFD-202ENST00000393158 PLEKHG1Q9ULL1 1385 aa15.33■□□□□ 0.04
PDGFD-202ENST00000393158 SBNO2Q9Y2G9 1366 aa15.33■□□□□ 0.04
PDGFD-202ENST00000393158 LMTK3Q96Q04 1460 aa15.33■□□□□ 0.04
PDGFD-202ENST00000393158 YTHDC2Q9H6S0 1430 aaKnown RBP15.32■□□□□ 0.04
PDGFD-202ENST00000393158 ADGRB2O60241 1585 aa15.31■□□□□ 0.04
PDGFD-202ENST00000393158 TMEM132EQ6IEE7 984 aa15.31■□□□□ 0.04
PDGFD-202ENST00000393158 TOPAZ1Q8N9V7 1692 aa15.31■□□□□ 0.04
PDGFD-202ENST00000393158 XIRP1Q702N8 1843 aaKnown RBP15.3■□□□□ 0.04
PDGFD-202ENST00000393158 CHGAP10645 457 aaKnown RBP15.3■□□□□ 0.04
PDGFD-202ENST00000393158 USP32Q8NFA0 1604 aa15.3■□□□□ 0.04
PDGFD-202ENST00000393158 VGFO15240 615 aaPredicted RBP15.3■□□□□ 0.04
PDGFD-202ENST00000393158 DIEXFQ68CQ4 756 aaKnown RBP15.29■□□□□ 0.04
PDGFD-202ENST00000393158 NWD1Q149M9 1564 aa15.28■□□□□ 0.04
PDGFD-202ENST00000393158 NALCNQ8IZF0 1738 aa15.28■□□□□ 0.04
PDGFD-202ENST00000393158 RGPD8O14715 1765 aaPredicted RBP15.28■□□□□ 0.04
PDGFD-202ENST00000393158 PLEKHH1Q9ULM0 1364 aa15.26■□□□□ 0.03
PDGFD-202ENST00000393158 ESF1Q9H501 851 aaKnown RBP15.25■□□□□ 0.03
PDGFD-202ENST00000393158 CD163L1Q9NR16 1453 aa15.24■□□□□ 0.03
PDGFD-202ENST00000393158 LRPPRCP42704 1394 aaKnown RBP15.24■□□□□ 0.03
PDGFD-202ENST00000393158 ABCC11Q96J66 1382 aa15.24■□□□□ 0.03
PDGFD-202ENST00000393158 AKAP12Q02952 1782 aa15.23■□□□□ 0.03
PDGFD-202ENST00000393158 DDX10Q13206 875 aaKnown RBP15.22■□□□□ 0.03
PDGFD-202ENST00000393158 ROBO2Q9HCK4 1378 aa15.22■□□□□ 0.03
PDGFD-202ENST00000393158 MIER1Q8N108 512 aa15.22■□□□□ 0.03
PDGFD-202ENST00000393158 PER1O15534 1290 aaPredicted RBP15.21■□□□□ 0.02
PDGFD-202ENST00000393158 NRKQ7Z2Y5 1582 aa15.21■□□□□ 0.02
PDGFD-202ENST00000393158 FAM135BQ49AJ0 1406 aa15.2■□□□□ 0.02
PDGFD-202ENST00000393158 PTCH1Q13635 1447 aa15.2■□□□□ 0.02
PDGFD-202ENST00000393158 SENP3Q9H4L4 574 aaPredicted RBP15.2■□□□□ 0.02
PDGFD-202ENST00000393158 MON2Q7Z3U7 1717 aa15.19■□□□□ 0.02
PDGFD-202ENST00000393158 MARF1Q9Y4F3 1742 aaKnown RBP15.19■□□□□ 0.02
PDGFD-202ENST00000393158 FMN2Q9NZ56 1722 aa15.19■□□□□ 0.02
PDGFD-202ENST00000393158 TRAK1Q9UPV9 953 aa15.18■□□□□ 0.02
PDGFD-202ENST00000393158 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.18■□□□□ 0.02
PDGFD-202ENST00000393158 ANKRD26Q9UPS8 1709 aa15.17■□□□□ 0.02
PDGFD-202ENST00000393158 EIF3AQ14152 1382 aaKnown RBP15.17■□□□□ 0.02
PDGFD-202ENST00000393158 PLPPR3Q6T4P5 718 aa15.16■□□□□ 0.02
PDGFD-202ENST00000393158 THEMISQ8N1K5 641 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms