RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 AAMPQ13685 434 aa16.07■□□□□ 0.16
LCA5-202ENST00000392959 C22orf23Q9BZE7 217 aa16.07■□□□□ 0.16
LCA5-202ENST00000392959 MYOM3Q5VTT5 1437 aa16.07■□□□□ 0.16
LCA5-202ENST00000392959 WASHC2AQ641Q2 1341 aa16.07■□□□□ 0.16
LCA5-202ENST00000392959 LNPKQ9C0E8 428 aa16.07■□□□□ 0.16
LCA5-202ENST00000392959 NUCB2P80303 420 aa16.07■□□□□ 0.16
LCA5-202ENST00000392959 TEFQ10587 303 aa16.06■□□□□ 0.16
LCA5-202ENST00000392959 ANO2Q9NQ90 1003 aa16.06■□□□□ 0.16
LCA5-202ENST00000392959 MCTP1Q6DN14 999 aa16.04■□□□□ 0.16
LCA5-202ENST00000392959 BRD4O60885 1362 aaPredicted RBP16.04■□□□□ 0.16
LCA5-202ENST00000392959 PANK1Q8TE04 598 aa16.04■□□□□ 0.16
LCA5-202ENST00000392959 FAM43AQ8N2R8 423 aa16.04■□□□□ 0.16
LCA5-202ENST00000392959 CCDC9Q9Y3X0 531 aaKnown RBP16.04■□□□□ 0.16
LCA5-202ENST00000392959 CPLX2Q6PUV4 134 aaKnown RBP16.03■□□□□ 0.16
LCA5-202ENST00000392959 IGF1RP08069 1367 aa16.03■□□□□ 0.16
LCA5-202ENST00000392959 INTS3Q68E01 1043 aaKnown RBP16.03■□□□□ 0.16
LCA5-202ENST00000392959 C9orf78Q9NZ63 289 aaPredicted RBP16.03■□□□□ 0.16
LCA5-202ENST00000392959 STAC3Q96MF2 364 aa16.03■□□□□ 0.16
LCA5-202ENST00000392959 ROCK1Q13464 1354 aa16.02■□□□□ 0.16
LCA5-202ENST00000392959 FRAT2O75474 233 aaPredicted RBP16.02■□□□□ 0.16
LCA5-202ENST00000392959 PES1O00541 588 aaKnown RBP16.02■□□□□ 0.16
LCA5-202ENST00000392959 NEXNQ0ZGT2 675 aa16.02■□□□□ 0.16
LCA5-202ENST00000392959 CCAR2Q8N163 923 aaKnown RBP16.02■□□□□ 0.16
LCA5-202ENST00000392959 FAM13BQ9NYF5 915 aa16.02■□□□□ 0.16
LCA5-202ENST00000392959 PTPRGP23470 1445 aa16.02■□□□□ 0.15
LCA5-202ENST00000392959 A0A0U1RQG5 324 aaPredicted RBP16.02■□□□□ 0.15
LCA5-202ENST00000392959 TPD52L1Q16890 204 aaPredicted RBP16.02■□□□□ 0.15
LCA5-202ENST00000392959 ADAMTS8Q9UP79 889 aa16.02■□□□□ 0.15
LCA5-202ENST00000392959 EIF2S2P20042 333 aaKnown RBP16.01■□□□□ 0.15
LCA5-202ENST00000392959 C1orf141Q5JVX7 400 aa16.01■□□□□ 0.15
LCA5-202ENST00000392959 ZNF644Q9H582 1327 aaPredicted RBP16.01■□□□□ 0.15
LCA5-202ENST00000392959 GNAI1P63096 354 aa16.01■□□□□ 0.15
LCA5-202ENST00000392959 TSR1Q2NL82 804 aaKnown RBP16.01■□□□□ 0.15
LCA5-202ENST00000392959 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.01■□□□□ 0.15
LCA5-202ENST00000392959 FKBP5Q13451 457 aaPredicted RBP16■□□□□ 0.15
LCA5-202ENST00000392959 ZNF592Q92610 1267 aa16■□□□□ 0.15
LCA5-202ENST00000392959 IFIT2P09913 472 aaKnown RBP16■□□□□ 0.15
LCA5-202ENST00000392959 LRRFIP1Q32MZ4 808 aaKnown RBP16■□□□□ 0.15
LCA5-202ENST00000392959 CDCA7LQ96GN5 454 aa16■□□□□ 0.15
LCA5-202ENST00000392959 MIA2Q96PC5 1412 aa16■□□□□ 0.15
LCA5-202ENST00000392959 MRE11P49959 708 aa16■□□□□ 0.15
LCA5-202ENST00000392959 BICD2Q8TD16 824 aa16■□□□□ 0.15
LCA5-202ENST00000392959 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
LCA5-202ENST00000392959 TPM1P09493 284 aa15.99■□□□□ 0.15
LCA5-202ENST00000392959 GTF2E1P29083 439 aaPredicted RBP15.99■□□□□ 0.15
LCA5-202ENST00000392959 AKAP17AQ02040 695 aaKnown RBP15.99■□□□□ 0.15
LCA5-202ENST00000392959 SMARCA4P51532 1647 aa15.99■□□□□ 0.15
LCA5-202ENST00000392959 RNF20Q5VTR2 975 aa15.99■□□□□ 0.15
LCA5-202ENST00000392959 VPS37CA5D8V6 355 aaPredicted RBP15.99■□□□□ 0.15
LCA5-202ENST00000392959 SMC3Q9UQE7 1217 aa15.98■□□□□ 0.15
LCA5-202ENST00000392959 MARCH6O60337 910 aa15.98■□□□□ 0.15
LCA5-202ENST00000392959 TMX4Q9H1E5 349 aaPredicted RBP15.98■□□□□ 0.15
LCA5-202ENST00000392959 SYNE3Q6ZMZ3 975 aa15.97■□□□□ 0.15
LCA5-202ENST00000392959 NECTIN2Q92692 538 aa15.97■□□□□ 0.15
LCA5-202ENST00000392959 LRRC9Q6ZRR7 1453 aa15.97■□□□□ 0.15
LCA5-202ENST00000392959 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
LCA5-202ENST00000392959 KIF21BO75037 1637 aa15.97■□□□□ 0.15
LCA5-202ENST00000392959 CPLX1O14810 134 aa15.96■□□□□ 0.15
LCA5-202ENST00000392959 GPS2Q13227 327 aa15.96■□□□□ 0.15
LCA5-202ENST00000392959 CDC45O75419 566 aa15.96■□□□□ 0.15
LCA5-202ENST00000392959 CEP89Q96ST8 783 aa15.96■□□□□ 0.14
LCA5-202ENST00000392959 ANKRD50Q9ULJ7 1429 aa15.95■□□□□ 0.14
LCA5-202ENST00000392959 TCP11L2Q8N4U5 519 aa15.95■□□□□ 0.14
LCA5-202ENST00000392959 G3BP1Q13283 466 aaKnown RBP eCLIP15.94■□□□□ 0.14
LCA5-202ENST00000392959 HSP90AB4PQ58FF6 505 aa15.94■□□□□ 0.14
LCA5-202ENST00000392959 TRIM29Q14134 588 aa15.94■□□□□ 0.14
LCA5-202ENST00000392959 TRAK2O60296 914 aa15.94■□□□□ 0.14
LCA5-202ENST00000392959 NASPP49321 788 aaPredicted RBP15.94■□□□□ 0.14
LCA5-202ENST00000392959 PDE4CQ08493 712 aa15.94■□□□□ 0.14
LCA5-202ENST00000392959 ZNF771Q7L3S4 317 aaPredicted RBP15.94■□□□□ 0.14
LCA5-202ENST00000392959 GGNBP2Q9H3C7 697 aa15.94■□□□□ 0.14
LCA5-202ENST00000392959 HMOX1P09601 288 aa15.94■□□□□ 0.14
LCA5-202ENST00000392959 CUX1P39880 1505 aa15.94■□□□□ 0.14
LCA5-202ENST00000392959 DDX58O95786 925 aaKnown RBP15.93■□□□□ 0.14
LCA5-202ENST00000392959 HOMER1Q86YM7 354 aa15.93■□□□□ 0.14
LCA5-202ENST00000392959 TTC5Q8N0Z6 440 aa15.93■□□□□ 0.14
LCA5-202ENST00000392959 SASS6Q6UVJ0 657 aa15.93■□□□□ 0.14
LCA5-202ENST00000392959 MTHFSP49914 203 aa15.93■□□□□ 0.14
LCA5-202ENST00000392959 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.93■□□□□ 0.14
LCA5-202ENST00000392959 TSPYL4Q9UJ04 414 aa15.92■□□□□ 0.14
LCA5-202ENST00000392959 IPO7O95373 1038 aaKnown RBP15.92■□□□□ 0.14
LCA5-202ENST00000392959 ERC2O15083 957 aa15.92■□□□□ 0.14
LCA5-202ENST00000392959 PDE3AQ14432 1141 aa15.91■□□□□ 0.14
LCA5-202ENST00000392959 PPP2R1AP30153 589 aa15.91■□□□□ 0.14
LCA5-202ENST00000392959 TRDNQ13061 729 aa15.91■□□□□ 0.14
LCA5-202ENST00000392959 CCDC70Q6NSX1 233 aa15.91■□□□□ 0.14
LCA5-202ENST00000392959 CCDC73Q6ZRK6 1079 aa15.91■□□□□ 0.14
LCA5-202ENST00000392959 TPM2P07951 284 aa15.9■□□□□ 0.14
LCA5-202ENST00000392959 PDZRN3Q9UPQ7 1066 aa15.9■□□□□ 0.14
LCA5-202ENST00000392959 G3V3G9 751 aa15.9■□□□□ 0.14
LCA5-202ENST00000392959 APPP05067 770 aa15.9■□□□□ 0.14
LCA5-202ENST00000392959 DCAF8Q5TAQ9 597 aa15.9■□□□□ 0.14
LCA5-202ENST00000392959 BACH2Q9BYV9 841 aa15.9■□□□□ 0.14
LCA5-202ENST00000392959 FGD5Q6ZNL6 1462 aa15.9■□□□□ 0.14
LCA5-202ENST00000392959 RNF214Q8ND24 703 aa15.89■□□□□ 0.13
LCA5-202ENST00000392959 ANKRD20A12PQ8NF67 263 aa15.89■□□□□ 0.13
LCA5-202ENST00000392959 IFT57Q9NWB7 429 aa15.89■□□□□ 0.13
LCA5-202ENST00000392959 VPS53Q5VIR6 699 aa15.89■□□□□ 0.13
LCA5-202ENST00000392959 HOOK1Q9UJC3 728 aaKnown RBP15.88■□□□□ 0.13
LCA5-202ENST00000392959 BRPF3Q9ULD4 1205 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms