RNA–Protein interactions for RNA: ENST00000392859.7

ARCN1-203, Transcript of archain 1, humanhuman

TSL 2 BASIC

Gene ARCN1, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1-203ENST00000392859 TNRQ92752 1358 aa23.41■■□□□ 1.34
ARCN1-203ENST00000392859 CARD11Q9BXL7 1154 aa23.4■■□□□ 1.34
ARCN1-203ENST00000392859 ADAMTSL3P82987 1691 aa23.39■■□□□ 1.34
ARCN1-203ENST00000392859 USP47Q96K76 1375 aa23.39■■□□□ 1.33
ARCN1-203ENST00000392859 NRXN1Q9ULB1 1477 aa23.36■■□□□ 1.33
ARCN1-203ENST00000392859 STAG3Q9UJ98 1225 aa23.36■■□□□ 1.33
ARCN1-203ENST00000392859 A2ML1A8K2U0 1454 aa23.35■■□□□ 1.33
ARCN1-203ENST00000392859 DIEXFQ68CQ4 756 aaKnown RBP23.35■■□□□ 1.33
ARCN1-203ENST00000392859 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
ARCN1-203ENST00000392859 GPRASP1Q5JY77 1395 aa23.34■■□□□ 1.33
ARCN1-203ENST00000392859 RPGRIP1LQ68CZ1 1315 aa23.34■■□□□ 1.33
ARCN1-203ENST00000392859 STAC3Q96MF2 364 aa23.33■■□□□ 1.32
ARCN1-203ENST00000392859 LAMC1P11047 1609 aa23.32■■□□□ 1.32
ARCN1-203ENST00000392859 KIAA1210Q9ULL0 1709 aa23.32■■□□□ 1.32
ARCN1-203ENST00000392859 CFAP70Q5T0N1 1121 aa23.32■■□□□ 1.32
ARCN1-203ENST00000392859 PIK3C2GO75747 1445 aa23.31■■□□□ 1.32
ARCN1-203ENST00000392859 UBR1Q8IWV7 1749 aa23.31■■□□□ 1.32
ARCN1-203ENST00000392859 IQGAP1P46940 1657 aa23.28■■□□□ 1.32
ARCN1-203ENST00000392859 C11orf95C9JLR9 678 aaPredicted RBP23.27■■□□□ 1.32
ARCN1-203ENST00000392859 MYO3AQ8NEV4 1616 aa23.27■■□□□ 1.32
ARCN1-203ENST00000392859 RIMS2Q9UQ26 1411 aa23.26■■□□□ 1.31
ARCN1-203ENST00000392859 ST20-MTHFSA0A0A6YYL1 179 aa23.25■■□□□ 1.31
ARCN1-203ENST00000392859 VGFO15240 615 aaPredicted RBP23.25■■□□□ 1.31
ARCN1-203ENST00000392859 NLRP1Q9C000 1473 aa23.25■■□□□ 1.31
ARCN1-203ENST00000392859 KDM5AP29375 1690 aaKnown RBP23.24■■□□□ 1.31
ARCN1-203ENST00000392859 WASHC2AQ641Q2 1341 aa23.24■■□□□ 1.31
ARCN1-203ENST00000392859 ZFYVE9O95405 1425 aa23.23■■□□□ 1.31
ARCN1-203ENST00000392859 DDX10Q13206 875 aaKnown RBP23.22■■□□□ 1.31
ARCN1-203ENST00000392859 POLR1AO95602 1720 aaPredicted RBP23.21■■□□□ 1.31
ARCN1-203ENST00000392859 C14orf93Q9H972 538 aaKnown RBP23.21■■□□□ 1.31
ARCN1-203ENST00000392859 ADGRB1O14514 1584 aa23.2■■□□□ 1.3
ARCN1-203ENST00000392859 TMEM132EQ6IEE7 984 aa23.19■■□□□ 1.3
ARCN1-203ENST00000392859 SCAF11Q99590 1463 aaKnown RBP23.19■■□□□ 1.3
ARCN1-203ENST00000392859 SETBP1Q9Y6X0 1596 aa23.19■■□□□ 1.3
ARCN1-203ENST00000392859 CCDC7Q96M83 1385 aa23.18■■□□□ 1.3
ARCN1-203ENST00000392859 ASXL1Q8IXJ9 1541 aa23.17■■□□□ 1.3
ARCN1-203ENST00000392859 PTPRMP28827 1452 aa23.17■■□□□ 1.3
ARCN1-203ENST00000392859 TMEM2Q9UHN6 1383 aa23.17■■□□□ 1.3
ARCN1-203ENST00000392859 KIF7Q2M1P5 1343 aa23.17■■□□□ 1.3
ARCN1-203ENST00000392859 CEP170BQ9Y4F5 1589 aaPredicted RBP23.16■■□□□ 1.3
ARCN1-203ENST00000392859 ALKQ9UM73 1620 aa23.15■■□□□ 1.3
ARCN1-203ENST00000392859 NRXN3Q9Y4C0 1643 aa23.15■■□□□ 1.3
ARCN1-203ENST00000392859 POLR3GLQ9BT43 218 aa23.13■■□□□ 1.29
ARCN1-203ENST00000392859 SETD1AO15047 1707 aaKnown RBP23.12■■□□□ 1.29
ARCN1-203ENST00000392859 TESK2Q96S53 571 aa23.12■■□□□ 1.29
ARCN1-203ENST00000392859 TRAK1Q9UPV9 953 aa23.11■■□□□ 1.29
ARCN1-203ENST00000392859 ZNF142P52746 1687 aaPredicted RBP23.1■■□□□ 1.29
ARCN1-203ENST00000392859 LTKP29376 864 aa23.1■■□□□ 1.29
ARCN1-203ENST00000392859 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.1■■□□□ 1.29
ARCN1-203ENST00000392859 DISP3Q9P2K9 1392 aa23.09■■□□□ 1.29
ARCN1-203ENST00000392859 SETD1BQ9UPS6 1966 aaKnown RBP23.09■■□□□ 1.29
ARCN1-203ENST00000392859 SLIT1O75093 1534 aa23.09■■□□□ 1.29
ARCN1-203ENST00000392859 ARHGAP23Q9P227 1491 aa23.08■■□□□ 1.28
ARCN1-203ENST00000392859 EIF3AQ14152 1382 aaKnown RBP23.08■■□□□ 1.28
ARCN1-203ENST00000392859 ARHGEF28Q8N1W1 1705 aaKnown RBP23.08■■□□□ 1.28
ARCN1-203ENST00000392859 MIER1Q8N108 512 aa23.08■■□□□ 1.28
ARCN1-203ENST00000392859 STK26Q9P289 416 aa23.07■■□□□ 1.28
ARCN1-203ENST00000392859 TXNDC2Q86VQ3 553 aa23.06■■□□□ 1.28
ARCN1-203ENST00000392859 THEMISQ8N1K5 641 aaPredicted RBP23.05■■□□□ 1.28
ARCN1-203ENST00000392859 BCANQ96GW7 911 aa23.05■■□□□ 1.28
ARCN1-203ENST00000392859 QRICH2Q9H0J4 1663 aa23.05■■□□□ 1.28
ARCN1-203ENST00000392859 HDGFP51858 240 aaKnown RBP23.04■■□□□ 1.28
ARCN1-203ENST00000392859 YTHDC2Q9H6S0 1430 aaKnown RBP23.02■■□□□ 1.28
ARCN1-203ENST00000392859 KDM4FA0A1W2PPD8 638 aa23.02■■□□□ 1.28
ARCN1-203ENST00000392859 METP08581 1390 aa23.01■■□□□ 1.27
ARCN1-203ENST00000392859 PLEKHG1Q9ULL1 1385 aa23.01■■□□□ 1.27
ARCN1-203ENST00000392859 EID1Q9Y6B2 187 aa23■■□□□ 1.27
ARCN1-203ENST00000392859 CENPJQ9HC77 1338 aaPredicted RBP23■■□□□ 1.27
ARCN1-203ENST00000392859 ADAMTS13Q76LX8 1427 aa23■■□□□ 1.27
ARCN1-203ENST00000392859 TMF1P82094 1093 aa22.99■■□□□ 1.27
ARCN1-203ENST00000392859 SAFB2Q14151 953 aaKnown RBP eCLIP22.97■■□□□ 1.27
ARCN1-203ENST00000392859 SLC26A8Q96RN1 970 aa22.96■■□□□ 1.27
ARCN1-203ENST00000392859 LRPPRCP42704 1394 aaKnown RBP22.94■■□□□ 1.26
ARCN1-203ENST00000392859 MED14O60244 1454 aa22.93■■□□□ 1.26
ARCN1-203ENST00000392859 PRAM1Q96QH2 718 aa22.93■■□□□ 1.26
ARCN1-203ENST00000392859 SBNO2Q9Y2G9 1366 aa22.91■■□□□ 1.26
ARCN1-203ENST00000392859 PLEKHH1Q9ULM0 1364 aa22.9■■□□□ 1.26
ARCN1-203ENST00000392859 KNDC1Q76NI1 1749 aa22.9■■□□□ 1.26
ARCN1-203ENST00000392859 MYOM1P52179 1685 aa22.89■■□□□ 1.26
ARCN1-203ENST00000392859 DLC1Q96QB1 1528 aa22.89■■□□□ 1.25
ARCN1-203ENST00000392859 TULP4Q9NRJ4 1543 aa22.89■■□□□ 1.25
ARCN1-203ENST00000392859 WAPLQ7Z5K2 1190 aa22.88■■□□□ 1.25
ARCN1-203ENST00000392859 POGKQ9P215 609 aa22.88■■□□□ 1.25
ARCN1-203ENST00000392859 ANKLE2Q86XL3 938 aa22.88■■□□□ 1.25
ARCN1-203ENST00000392859 PTPRUQ92729 1446 aa22.88■■□□□ 1.25
ARCN1-203ENST00000392859 MINK1Q8N4C8 1332 aaPredicted RBP22.87■■□□□ 1.25
ARCN1-203ENST00000392859 ABCC11Q96J66 1382 aa22.87■■□□□ 1.25
ARCN1-203ENST00000392859 DIP2AQ14689 1571 aa22.86■■□□□ 1.25
ARCN1-203ENST00000392859 CPS1P31327 1500 aa22.85■■□□□ 1.25
ARCN1-203ENST00000392859 ANP32CO43423 234 aa22.84■■□□□ 1.25
ARCN1-203ENST00000392859 CNGB1Q14028 1251 aaPredicted RBP22.84■■□□□ 1.25
ARCN1-203ENST00000392859 NCKAP5LQ9HCH0 1330 aa22.84■■□□□ 1.25
ARCN1-203ENST00000392859 CDCA8Q53HL2 280 aa22.83■■□□□ 1.25
ARCN1-203ENST00000392859 TBX22Q9Y458 520 aa22.83■■□□□ 1.25
ARCN1-203ENST00000392859 TECPR2O15040 1411 aa22.83■■□□□ 1.25
ARCN1-203ENST00000392859 ROBO2Q9HCK4 1378 aa22.82■■□□□ 1.24
ARCN1-203ENST00000392859 NPHP4O75161 1426 aaPredicted RBP22.8■■□□□ 1.24
ARCN1-203ENST00000392859 HSPA2P54652 639 aa22.8■■□□□ 1.24
ARCN1-203ENST00000392859 PANK3Q9H999 370 aa22.8■■□□□ 1.24
ARCN1-203ENST00000392859 EVC2Q86UK5 1308 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms