RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 NEXMIFQ5QGS0 1516 aa36.95■■■■□ 3.51
HOMER3-202ENST00000392351 NCKAP5LQ9HCH0 1330 aa36.95■■■■□ 3.51
HOMER3-202ENST00000392351 EID1Q9Y6B2 187 aa36.95■■■■□ 3.51
HOMER3-202ENST00000392351 PPLO60437 1756 aa36.94■■■■□ 3.5
HOMER3-202ENST00000392351 LTKP29376 864 aa36.93■■■■□ 3.5
HOMER3-202ENST00000392351 TXNDC2Q86VQ3 553 aa36.93■■■■□ 3.5
HOMER3-202ENST00000392351 CCER1Q8TC90 406 aaPredicted RBP36.92■■■■□ 3.5
HOMER3-202ENST00000392351 IFT172Q9UG01 1749 aa36.91■■■■□ 3.5
HOMER3-202ENST00000392351 NEUROD1Q13562 356 aa36.9■■■■□ 3.5
HOMER3-202ENST00000392351 NUTM2DQ5VT03 806 aaPredicted RBP36.9■■■■□ 3.5
HOMER3-202ENST00000392351 HDGFP51858 240 aaKnown RBP36.89■■■■□ 3.5
HOMER3-202ENST00000392351 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.88■■■■□ 3.49
HOMER3-202ENST00000392351 RPGRIP1LQ68CZ1 1315 aa36.88■■■■□ 3.49
HOMER3-202ENST00000392351 PPP1R15AO75807 674 aaPredicted RBP36.87■■■■□ 3.49
HOMER3-202ENST00000392351 IQGAP1P46940 1657 aa36.86■■■■□ 3.49
HOMER3-202ENST00000392351 MED14O60244 1454 aa36.85■■■■□ 3.49
HOMER3-202ENST00000392351 CLSPNQ9HAW4 1339 aa36.85■■■■□ 3.49
HOMER3-202ENST00000392351 NPHP4O75161 1426 aaPredicted RBP36.82■■■■□ 3.49
HOMER3-202ENST00000392351 PLEKHG1Q9ULL1 1385 aa36.78■■■■□ 3.48
HOMER3-202ENST00000392351 SENP3Q9H4L4 574 aaPredicted RBP36.78■■■■□ 3.48
HOMER3-202ENST00000392351 VGFO15240 615 aaPredicted RBP36.77■■■■□ 3.48
HOMER3-202ENST00000392351 DMRT2Q9Y5R5 561 aa36.76■■■■□ 3.48
HOMER3-202ENST00000392351 DCAF11Q8TEB1 546 aa36.74■■■■□ 3.47
HOMER3-202ENST00000392351 BCANQ96GW7 911 aa36.74■■■■□ 3.47
HOMER3-202ENST00000392351 MYOM2P54296 1465 aa36.72■■■■□ 3.47
HOMER3-202ENST00000392351 NRXN3Q9Y4C0 1643 aa36.71■■■■□ 3.47
HOMER3-202ENST00000392351 SETBP1Q9Y6X0 1596 aa36.7■■■■□ 3.47
HOMER3-202ENST00000392351 ADGRF5Q8IZF2 1346 aa36.7■■■■□ 3.47
HOMER3-202ENST00000392351 KDM2AQ9Y2K7 1162 aa36.7■■■■□ 3.46
HOMER3-202ENST00000392351 TONSLQ96HA7 1378 aa36.68■■■■□ 3.46
HOMER3-202ENST00000392351 L3MBTL2Q969R5 705 aa36.68■■■■□ 3.46
HOMER3-202ENST00000392351 SLC26A8Q96RN1 970 aa36.65■■■■□ 3.46
HOMER3-202ENST00000392351 NRXN1Q9ULB1 1477 aa36.65■■■■□ 3.46
HOMER3-202ENST00000392351 ADAMTS13Q76LX8 1427 aa36.64■■■■□ 3.46
HOMER3-202ENST00000392351 DIP2AQ14689 1571 aa36.63■■■■□ 3.45
HOMER3-202ENST00000392351 PIK3C2GO75747 1445 aa36.63■■■■□ 3.45
HOMER3-202ENST00000392351 STAC3Q96MF2 364 aa36.62■■■■□ 3.45
HOMER3-202ENST00000392351 SETD1AO15047 1707 aaKnown RBP36.58■■■■□ 3.45
HOMER3-202ENST00000392351 ALKQ9UM73 1620 aa36.58■■■■□ 3.45
HOMER3-202ENST00000392351 TBX22Q9Y458 520 aa36.55■■■■□ 3.44
HOMER3-202ENST00000392351 LAMC1P11047 1609 aa36.54■■■■□ 3.44
HOMER3-202ENST00000392351 PRAG1Q86YV5 1406 aa36.51■■■■□ 3.44
HOMER3-202ENST00000392351 CHD2O14647 1828 aaKnown RBP36.48■■■■□ 3.43
HOMER3-202ENST00000392351 ZNF335Q9H4Z2 1342 aaPredicted RBP36.48■■■■□ 3.43
HOMER3-202ENST00000392351 METP08581 1390 aa36.47■■■■□ 3.43
HOMER3-202ENST00000392351 TIMELESSQ9UNS1 1208 aa36.47■■■■□ 3.43
HOMER3-202ENST00000392351 STRCP1A6NGW2 1772 aa36.47■■■■□ 3.43
HOMER3-202ENST00000392351 CFAP70Q5T0N1 1121 aa36.46■■■■□ 3.43
HOMER3-202ENST00000392351 C14orf93Q9H972 538 aaKnown RBP36.45■■■■□ 3.43
HOMER3-202ENST00000392351 KIAA1210Q9ULL0 1709 aa36.44■■■■□ 3.42
HOMER3-202ENST00000392351 PIK3R4Q99570 1358 aa36.44■■■■□ 3.42
HOMER3-202ENST00000392351 ASXL1Q8IXJ9 1541 aa36.42■■■■□ 3.42
HOMER3-202ENST00000392351 NWD1Q149M9 1564 aa36.42■■■■□ 3.42
HOMER3-202ENST00000392351 PTPRUQ92729 1446 aa36.39■■■■□ 3.42
HOMER3-202ENST00000392351 TRPM1Q7Z4N2 1603 aa36.39■■■■□ 3.42
HOMER3-202ENST00000392351 XRN1Q8IZH2 1706 aaKnown RBP36.37■■■■□ 3.41
HOMER3-202ENST00000392351 KCNA6P17658 529 aa36.37■■■■□ 3.41
HOMER3-202ENST00000392351 NBPF8Q3BBV2 869 aa36.36■■■■□ 3.41
HOMER3-202ENST00000392351 TMEM132EQ6IEE7 984 aa36.36■■■■□ 3.41
HOMER3-202ENST00000392351 LTBP4Q8N2S1 1624 aa36.36■■■■□ 3.41
HOMER3-202ENST00000392351 ADGRB1O14514 1584 aa36.35■■■■□ 3.41
HOMER3-202ENST00000392351 AMOTL2Q9Y2J4 779 aa36.33■■■■□ 3.41
HOMER3-202ENST00000392351 CPS1P31327 1500 aa36.32■■■■□ 3.4
HOMER3-202ENST00000392351 NKTRP30414 1462 aaKnown RBP36.31■■■■□ 3.4
HOMER3-202ENST00000392351 YTHDC2Q9H6S0 1430 aaKnown RBP36.3■■■■□ 3.4
HOMER3-202ENST00000392351 KNDC1Q76NI1 1749 aa36.28■■■■□ 3.4
HOMER3-202ENST00000392351 NBPF1Q3BBV0 1214 aa36.28■■■■□ 3.4
HOMER3-202ENST00000392351 STK26Q9P289 416 aa36.27■■■■□ 3.4
HOMER3-202ENST00000392351 LRPPRCP42704 1394 aaKnown RBP36.26■■■■□ 3.4
HOMER3-202ENST00000392351 RALGAPBQ86X10 1494 aa36.25■■■■□ 3.39
HOMER3-202ENST00000392351 ROCK2O75116 1388 aaKnown RBP36.23■■■■□ 3.39
HOMER3-202ENST00000392351 LRRC7Q96NW7 1537 aa36.22■■■■□ 3.39
HOMER3-202ENST00000392351 TECPR2O15040 1411 aa36.22■■■■□ 3.39
HOMER3-202ENST00000392351 PTCH1Q13635 1447 aa36.22■■■■□ 3.39
HOMER3-202ENST00000392351 ABCC11Q96J66 1382 aa36.21■■■■□ 3.39
HOMER3-202ENST00000392351 XIRP1Q702N8 1843 aaKnown RBP36.21■■■■□ 3.39
HOMER3-202ENST00000392351 PROSER2Q86WR7 435 aaPredicted RBP36.2■■■■□ 3.39
HOMER3-202ENST00000392351 ROBO2Q9HCK4 1378 aa36.18■■■■□ 3.38
HOMER3-202ENST00000392351 RBM33Q96EV2 1170 aaKnown RBP36.16■■■■□ 3.38
HOMER3-202ENST00000392351 ARHGEF28Q8N1W1 1705 aaKnown RBP36.16■■■■□ 3.38
HOMER3-202ENST00000392351 TRAK1Q9UPV9 953 aa36.15■■■■□ 3.38
HOMER3-202ENST00000392351 GPRASP1Q5JY77 1395 aa36.15■■■■□ 3.38
HOMER3-202ENST00000392351 TMEM94Q12767 1356 aa36.14■■■■□ 3.38
HOMER3-202ENST00000392351 DLC1Q96QB1 1528 aa36.14■■■■□ 3.38
HOMER3-202ENST00000392351 ILDR1Q86SU0 546 aaPredicted RBP36.13■■■■□ 3.37
HOMER3-202ENST00000392351 CARD11Q9BXL7 1154 aa36.1■■■■□ 3.37
HOMER3-202ENST00000392351 FAM135BQ49AJ0 1406 aa36.09■■■■□ 3.37
HOMER3-202ENST00000392351 CERKQ8TCT0 537 aa36.08■■■■□ 3.37
HOMER3-202ENST00000392351 WAPLQ7Z5K2 1190 aa36.07■■■■□ 3.37
HOMER3-202ENST00000392351 PLEKHH1Q9ULM0 1364 aa36.06■■■■□ 3.36
HOMER3-202ENST00000392351 NALCNQ8IZF0 1738 aa36.06■■■■□ 3.36
HOMER3-202ENST00000392351 SIRT1Q96EB6 747 aa36.06■■■■□ 3.36
HOMER3-202ENST00000392351 PRAM1Q96QH2 718 aa36.06■■■■□ 3.36
HOMER3-202ENST00000392351 NCOA3Q9Y6Q9 1424 aa36.05■■■■□ 3.36
HOMER3-202ENST00000392351 C14orf37Q86TY3 774 aa36.05■■■■□ 3.36
HOMER3-202ENST00000392351 POGKQ9P215 609 aa36.03■■■■□ 3.36
HOMER3-202ENST00000392351 IQSEC2Q5JU85 1478 aa36.03■■■■□ 3.36
HOMER3-202ENST00000392351 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.01■■■■□ 3.36
HOMER3-202ENST00000392351 SAFB2Q14151 953 aaKnown RBP eCLIP36.01■■■■□ 3.35
HOMER3-202ENST00000392351 ADGRL3Q9HAR2 1447 aa35.99■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms