RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 KTN1Q86UP2 1357 aaKnown RBP25.24■■□□□ 1.63
STRADB-202ENST00000392249 NEFLP07196 543 aa25.23■■□□□ 1.63
STRADB-202ENST00000392249 RALBP1Q15311 655 aa25.23■■□□□ 1.63
STRADB-202ENST00000392249 CFAP70Q5T0N1 1121 aa25.22■■□□□ 1.63
STRADB-202ENST00000392249 ZBED9Q6R2W3 1325 aa25.22■■□□□ 1.63
STRADB-202ENST00000392249 MYBBP1AQ9BQG0 1328 aaKnown RBP25.22■■□□□ 1.63
STRADB-202ENST00000392249 PER1O15534 1290 aaPredicted RBP25.22■■□□□ 1.63
STRADB-202ENST00000392249 TMC1Q8TDI8 760 aa25.22■■□□□ 1.63
STRADB-202ENST00000392249 TSPOAP1O95153 1857 aa25.21■■□□□ 1.63
STRADB-202ENST00000392249 SIGLEC1Q9BZZ2 1709 aa25.2■■□□□ 1.62
STRADB-202ENST00000392249 PANK3Q9H999 370 aa25.2■■□□□ 1.62
STRADB-202ENST00000392249 NOS1P29475 1434 aa25.19■■□□□ 1.62
STRADB-202ENST00000392249 BCANQ96GW7 911 aa25.19■■□□□ 1.62
STRADB-202ENST00000392249 EIF3AQ14152 1382 aaKnown RBP25.18■■□□□ 1.62
STRADB-202ENST00000392249 NRXN1Q9ULB1 1477 aa25.18■■□□□ 1.62
STRADB-202ENST00000392249 PARD3Q8TEW0 1356 aa25.17■■□□□ 1.62
STRADB-202ENST00000392249 PNISRQ8TF01 805 aaKnown RBP25.17■■□□□ 1.62
STRADB-202ENST00000392249 BRD4O60885 1362 aaPredicted RBP25.17■■□□□ 1.62
STRADB-202ENST00000392249 PPLO60437 1756 aa25.15■■□□□ 1.62
STRADB-202ENST00000392249 ZC3H13Q5T200 1668 aaKnown RBP25.15■■□□□ 1.62
STRADB-202ENST00000392249 ZMYM4Q5VZL5 1548 aa25.15■■□□□ 1.62
STRADB-202ENST00000392249 SYNMO15061 1565 aa25.13■■□□□ 1.61
STRADB-202ENST00000392249 CC2D1BQ5T0F9 858 aaKnown RBP25.12■■□□□ 1.61
STRADB-202ENST00000392249 PIK3C2BO00750 1634 aa25.11■■□□□ 1.61
STRADB-202ENST00000392249 CDCA8Q53HL2 280 aa25.11■■□□□ 1.61
STRADB-202ENST00000392249 ARHGAP31Q2M1Z3 1444 aa25.1■■□□□ 1.61
STRADB-202ENST00000392249 NLRP13Q86W25 1043 aa25.1■■□□□ 1.61
STRADB-202ENST00000392249 PIK3C2GO75747 1445 aa25.09■■□□□ 1.61
STRADB-202ENST00000392249 LRPPRCP42704 1394 aaKnown RBP25.08■■□□□ 1.6
STRADB-202ENST00000392249 SETBP1Q9Y6X0 1596 aa25.06■■□□□ 1.6
STRADB-202ENST00000392249 MYOM1P52179 1685 aa25.06■■□□□ 1.6
STRADB-202ENST00000392249 RPGRIP1LQ68CZ1 1315 aa25.06■■□□□ 1.6
STRADB-202ENST00000392249 KDM5AP29375 1690 aaKnown RBP25.06■■□□□ 1.6
STRADB-202ENST00000392249 SENP3-EIF4A1A0A087X0R7 540 aa25.04■■□□□ 1.6
STRADB-202ENST00000392249 ERVK-7P63135 1459 aa25.03■■□□□ 1.6
STRADB-202ENST00000392249 MYO3AQ8NEV4 1616 aa25.03■■□□□ 1.6
STRADB-202ENST00000392249 PELP1Q8IZL8 1130 aaKnown RBP25.03■■□□□ 1.6
STRADB-202ENST00000392249 C14orf93Q9H972 538 aaKnown RBP25.03■■□□□ 1.6
STRADB-202ENST00000392249 KNSTRNQ9Y448 316 aa25.02■■□□□ 1.6
STRADB-202ENST00000392249 PREX1Q8TCU6 1659 aa25.01■■□□□ 1.6
STRADB-202ENST00000392249 IDI1Q13907 227 aa25.01■■□□□ 1.59
STRADB-202ENST00000392249 NUTM2DQ5VT03 806 aaPredicted RBP25.01■■□□□ 1.59
STRADB-202ENST00000392249 NEXMIFQ5QGS0 1516 aa25.01■■□□□ 1.59
STRADB-202ENST00000392249 IRX6P78412 446 aaPredicted RBP25■■□□□ 1.59
STRADB-202ENST00000392249 ADGRB1O14514 1584 aa25■■□□□ 1.59
STRADB-202ENST00000392249 SLC24A1O60721 1099 aa24.99■■□□□ 1.59
STRADB-202ENST00000392249 TRAK1Q9UPV9 953 aa24.98■■□□□ 1.59
STRADB-202ENST00000392249 TMEM132EQ6IEE7 984 aa24.98■■□□□ 1.59
STRADB-202ENST00000392249 KIF13AQ9H1H9 1805 aa24.97■■□□□ 1.59
STRADB-202ENST00000392249 SLC52A1Q9NWF4 448 aa24.97■■□□□ 1.59
STRADB-202ENST00000392249 CENPJQ9HC77 1338 aaPredicted RBP24.97■■□□□ 1.59
STRADB-202ENST00000392249 MYO5BQ9ULV0 1848 aa24.96■■□□□ 1.59
STRADB-202ENST00000392249 REREQ9P2R6 1566 aa24.96■■□□□ 1.59
STRADB-202ENST00000392249 VGFO15240 615 aaPredicted RBP24.96■■□□□ 1.59
STRADB-202ENST00000392249 SBNO2Q9Y2G9 1366 aa24.96■■□□□ 1.59
STRADB-202ENST00000392249 AMER1Q5JTC6 1135 aaPredicted RBP24.95■■□□□ 1.59
STRADB-202ENST00000392249 SMG6Q86US8 1419 aaKnown RBP24.95■■□□□ 1.58
STRADB-202ENST00000392249 ASXL1Q8IXJ9 1541 aa24.94■■□□□ 1.58
STRADB-202ENST00000392249 FBXO31Q5XUX0 539 aaPredicted RBP24.93■■□□□ 1.58
STRADB-202ENST00000392249 QRICH2Q9H0J4 1663 aa24.93■■□□□ 1.58
STRADB-202ENST00000392249 AGLP35573 1532 aa24.93■■□□□ 1.58
STRADB-202ENST00000392249 TMEM131LA2VDJ0 1609 aa24.92■■□□□ 1.58
STRADB-202ENST00000392249 NUDCQ9Y266 331 aa24.91■■□□□ 1.58
STRADB-202ENST00000392249 CLTCQ00610 1675 aaKnown RBP24.89■■□□□ 1.57
STRADB-202ENST00000392249 PPP2R1AP30153 589 aa24.87■■□□□ 1.57
STRADB-202ENST00000392249 SENP3Q9H4L4 574 aaPredicted RBP24.87■■□□□ 1.57
STRADB-202ENST00000392249 ZFYVE9O95405 1425 aa24.86■■□□□ 1.57
STRADB-202ENST00000392249 NPC1L1Q9UHC9 1359 aa24.86■■□□□ 1.57
STRADB-202ENST00000392249 MLECQ14165 292 aa24.86■■□□□ 1.57
STRADB-202ENST00000392249 ARHGEF40Q8TER5 1519 aa24.85■■□□□ 1.57
STRADB-202ENST00000392249 ARHGEF28Q8N1W1 1705 aaKnown RBP24.85■■□□□ 1.57
STRADB-202ENST00000392249 PPP6R1Q9UPN7 881 aa24.84■■□□□ 1.57
STRADB-202ENST00000392249 SALL2Q9Y467 1007 aaPredicted RBP24.84■■□□□ 1.57
STRADB-202ENST00000392249 CARD14Q9BXL6 1004 aa24.83■■□□□ 1.56
STRADB-202ENST00000392249 BLMP54132 1417 aaPredicted RBP24.82■■□□□ 1.56
STRADB-202ENST00000392249 ERICH6BQ5W0A0 696 aa24.8■■□□□ 1.56
STRADB-202ENST00000392249 INSRP06213 1382 aa24.79■■□□□ 1.56
STRADB-202ENST00000392249 STAG3Q9UJ98 1225 aa24.79■■□□□ 1.56
STRADB-202ENST00000392249 SPATA31D1Q6ZQQ2 1576 aa24.76■■□□□ 1.55
STRADB-202ENST00000392249 SLC12A5Q9H2X9 1139 aa24.76■■□□□ 1.55
STRADB-202ENST00000392249 STK26Q9P289 416 aa24.76■■□□□ 1.55
STRADB-202ENST00000392249 ADAMTS8Q9UP79 889 aa24.76■■□□□ 1.55
STRADB-202ENST00000392249 TSHZ2Q9NRE2 1034 aa24.76■■□□□ 1.55
STRADB-202ENST00000392249 TULP4Q9NRJ4 1543 aa24.75■■□□□ 1.55
STRADB-202ENST00000392249 SAFB2Q14151 953 aaKnown RBP eCLIP24.74■■□□□ 1.55
STRADB-202ENST00000392249 WDR43Q15061 677 aaKnown RBP eCLIP24.74■■□□□ 1.55
STRADB-202ENST00000392249 EVC2Q86UK5 1308 aa24.74■■□□□ 1.55
STRADB-202ENST00000392249 NSD3Q9BZ95 1437 aa24.73■■□□□ 1.55
STRADB-202ENST00000392249 PPP4R2Q9NY27 417 aa24.73■■□□□ 1.55
STRADB-202ENST00000392249 RNF123Q5XPI4 1314 aa24.72■■□□□ 1.55
STRADB-202ENST00000392249 PDE3BQ13370 1112 aa24.7■■□□□ 1.55
STRADB-202ENST00000392249 A2ML1A8K2U0 1454 aa24.7■■□□□ 1.55
STRADB-202ENST00000392249 ALKQ9UM73 1620 aa24.69■■□□□ 1.54
STRADB-202ENST00000392249 ESF1Q9H501 851 aaKnown RBP24.69■■□□□ 1.54
STRADB-202ENST00000392249 YTHDC2Q9H6S0 1430 aaKnown RBP24.68■■□□□ 1.54
STRADB-202ENST00000392249 PTPRMP28827 1452 aa24.68■■□□□ 1.54
STRADB-202ENST00000392249 CDCA7LQ96GN5 454 aa24.67■■□□□ 1.54
STRADB-202ENST00000392249 CABP2Q9NPB3 220 aa24.67■■□□□ 1.54
STRADB-202ENST00000392249 PUS7Q96PZ0 661 aaKnown RBP24.66■■□□□ 1.54
STRADB-202ENST00000392249 ZMYM3Q14202 1370 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms