RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 RIMS2Q9UQ26 1411 aa10.67□□□□□ -0.7
RNU1-56P-201ENST00000391303 SLC26A8Q96RN1 970 aa10.66□□□□□ -0.7
RNU1-56P-201ENST00000391303 FAM135BQ49AJ0 1406 aa10.66□□□□□ -0.7
RNU1-56P-201ENST00000391303 TMEM94Q12767 1356 aa10.65□□□□□ -0.7
RNU1-56P-201ENST00000391303 PROSER2Q86WR7 435 aaPredicted RBP10.65□□□□□ -0.7
RNU1-56P-201ENST00000391303 BCANQ96GW7 911 aa10.65□□□□□ -0.7
RNU1-56P-201ENST00000391303 IQGAP3Q86VI3 1631 aa10.65□□□□□ -0.7
RNU1-56P-201ENST00000391303 HFM1A2PYH4 1435 aa10.64□□□□□ -0.71
RNU1-56P-201ENST00000391303 NAIPQ13075 1403 aa10.64□□□□□ -0.71
RNU1-56P-201ENST00000391303 CHGAP10645 457 aaKnown RBP10.63□□□□□ -0.71
RNU1-56P-201ENST00000391303 SOCS7O14512 581 aa10.62□□□□□ -0.71
RNU1-56P-201ENST00000391303 PPARGC1BQ86YN6 1023 aaKnown RBP10.62□□□□□ -0.71
RNU1-56P-201ENST00000391303 MSH6P52701 1360 aa10.62□□□□□ -0.71
RNU1-56P-201ENST00000391303 TMEM131LA2VDJ0 1609 aa10.62□□□□□ -0.71
RNU1-56P-201ENST00000391303 ALKQ9UM73 1620 aa10.62□□□□□ -0.71
RNU1-56P-201ENST00000391303 NWD1Q149M9 1564 aa10.61□□□□□ -0.71
RNU1-56P-201ENST00000391303 GCC2Q8IWJ2 1684 aa10.61□□□□□ -0.71
RNU1-56P-201ENST00000391303 DIP2AQ14689 1571 aa10.6□□□□□ -0.71
RNU1-56P-201ENST00000391303 ADAMTS13Q76LX8 1427 aa10.6□□□□□ -0.71
RNU1-56P-201ENST00000391303 ILDR2Q71H61 639 aa10.59□□□□□ -0.71
RNU1-56P-201ENST00000391303 CADPS2Q86UW7 1296 aa10.59□□□□□ -0.71
RNU1-56P-201ENST00000391303 C19orf44Q9H6X5 657 aa10.59□□□□□ -0.71
RNU1-56P-201ENST00000391303 RPGRIP1LQ68CZ1 1315 aa10.58□□□□□ -0.71
RNU1-56P-201ENST00000391303 SLAIN2Q9P270 581 aa10.58□□□□□ -0.72
RNU1-56P-201ENST00000391303 E9PCH4 1651 aa10.57□□□□□ -0.72
RNU1-56P-201ENST00000391303 VGFO15240 615 aaPredicted RBP10.57□□□□□ -0.72
RNU1-56P-201ENST00000391303 SLC4A1APQ9BWU0 796 aaKnown RBP10.57□□□□□ -0.72
RNU1-56P-201ENST00000391303 ZNF326Q5BKZ1 582 aaKnown RBP10.56□□□□□ -0.72
RNU1-56P-201ENST00000391303 TRIM52Q96A61 297 aa10.56□□□□□ -0.72
RNU1-56P-201ENST00000391303 AMOTL2Q9Y2J4 779 aa10.56□□□□□ -0.72
RNU1-56P-201ENST00000391303 TRPM2O94759 1503 aa10.56□□□□□ -0.72
RNU1-56P-201ENST00000391303 STRCP1A6NGW2 1772 aa10.56□□□□□ -0.72
RNU1-56P-201ENST00000391303 DCCP43146 1447 aa10.56□□□□□ -0.72
RNU1-56P-201ENST00000391303 ATF3P18847 181 aa10.55□□□□□ -0.72
RNU1-56P-201ENST00000391303 PHF23Q9BUL5 403 aaPredicted RBP10.55□□□□□ -0.72
RNU1-56P-201ENST00000391303 C14orf37Q86TY3 774 aa10.54□□□□□ -0.72
RNU1-56P-201ENST00000391303 SETBP1Q9Y6X0 1596 aa10.54□□□□□ -0.72
RNU1-56P-201ENST00000391303 MED1Q15648 1581 aaPredicted RBP10.53□□□□□ -0.72
RNU1-56P-201ENST00000391303 NUTM2DQ5VT03 806 aaPredicted RBP10.53□□□□□ -0.72
RNU1-56P-201ENST00000391303 PRAG1Q86YV5 1406 aa10.52□□□□□ -0.73
RNU1-56P-201ENST00000391303 RBM33Q96EV2 1170 aaKnown RBP10.52□□□□□ -0.73
RNU1-56P-201ENST00000391303 CFAP65Q6ZU64 1925 aaKnown RBP10.51□□□□□ -0.73
RNU1-56P-201ENST00000391303 METP08581 1390 aa10.51□□□□□ -0.73
RNU1-56P-201ENST00000391303 JCADQ9P266 1359 aa10.51□□□□□ -0.73
RNU1-56P-201ENST00000391303 PTPRUQ92729 1446 aa10.5□□□□□ -0.73
RNU1-56P-201ENST00000391303 MPHOSPH9Q99550 1183 aa10.5□□□□□ -0.73
RNU1-56P-201ENST00000391303 SPATA31A6Q5VVP1 1343 aa10.49□□□□□ -0.73
RNU1-56P-201ENST00000391303 ANKRD30BQ9BXX2 1392 aa10.49□□□□□ -0.73
RNU1-56P-201ENST00000391303 CCDC144AA2RUR9 1427 aa10.49□□□□□ -0.73
RNU1-56P-201ENST00000391303 PTCH1Q13635 1447 aa10.49□□□□□ -0.73
RNU1-56P-201ENST00000391303 NEXMIFQ5QGS0 1516 aa10.48□□□□□ -0.73
RNU1-56P-201ENST00000391303 SPHKAPQ2M3C7 1700 aa10.48□□□□□ -0.73
RNU1-56P-201ENST00000391303 HRCP23327 699 aa10.48□□□□□ -0.73
RNU1-56P-201ENST00000391303 ADGRL3Q9HAR2 1447 aa10.48□□□□□ -0.73
RNU1-56P-201ENST00000391303 BRINP3Q76B58 766 aa10.47□□□□□ -0.73
RNU1-56P-201ENST00000391303 SENP3Q9H4L4 574 aaPredicted RBP10.47□□□□□ -0.73
RNU1-56P-201ENST00000391303 CLTCL1P53675 1640 aa10.47□□□□□ -0.73
RNU1-56P-201ENST00000391303 CHD2O14647 1828 aaKnown RBP10.47□□□□□ -0.73
RNU1-56P-201ENST00000391303 SETD5Q9C0A6 1442 aa10.46□□□□□ -0.74
RNU1-56P-201ENST00000391303 XIRP1Q702N8 1843 aaKnown RBP10.45□□□□□ -0.74
RNU1-56P-201ENST00000391303 SPATA31E1Q6ZUB1 1445 aa10.45□□□□□ -0.74
RNU1-56P-201ENST00000391303 STAC3Q96MF2 364 aa10.45□□□□□ -0.74
RNU1-56P-201ENST00000391303 XRN1Q8IZH2 1706 aaKnown RBP10.44□□□□□ -0.74
RNU1-56P-201ENST00000391303 ROBO1Q9Y6N7 1651 aa10.44□□□□□ -0.74
RNU1-56P-201ENST00000391303 AHDC1Q5TGY3 1603 aaPredicted RBP10.44□□□□□ -0.74
RNU1-56P-201ENST00000391303 NRXN3Q9Y4C0 1643 aa10.44□□□□□ -0.74
RNU1-56P-201ENST00000391303 MST1RQ04912 1400 aa10.44□□□□□ -0.74
RNU1-56P-201ENST00000391303 LRRC59Q96AG4 307 aaKnown RBP10.44□□□□□ -0.74
RNU1-56P-201ENST00000391303 SIRT1Q96EB6 747 aa10.44□□□□□ -0.74
RNU1-56P-201ENST00000391303 RGS17Q9UGC6 210 aaPredicted RBP10.44□□□□□ -0.74
RNU1-56P-201ENST00000391303 TECPR2O15040 1411 aa10.42□□□□□ -0.74
RNU1-56P-201ENST00000391303 ABCC11Q96J66 1382 aa10.42□□□□□ -0.74
RNU1-56P-201ENST00000391303 ROBO2Q9HCK4 1378 aa10.42□□□□□ -0.74
RNU1-56P-201ENST00000391303 LRPPRCP42704 1394 aaKnown RBP10.41□□□□□ -0.74
RNU1-56P-201ENST00000391303 FOXD1Q16676 465 aa10.41□□□□□ -0.74
RNU1-56P-201ENST00000391303 ZNF772Q68DY9 489 aaPredicted RBP10.41□□□□□ -0.74
RNU1-56P-201ENST00000391303 MYO5BQ9ULV0 1848 aa10.4□□□□□ -0.74
RNU1-56P-201ENST00000391303 ADGRF5Q8IZF2 1346 aa10.4□□□□□ -0.74
RNU1-56P-201ENST00000391303 ASXL1Q8IXJ9 1541 aa10.4□□□□□ -0.74
RNU1-56P-201ENST00000391303 RGL3Q3MIN7 710 aa10.4□□□□□ -0.74
RNU1-56P-201ENST00000391303 C1orf167Q5SNV9 1468 aa10.4□□□□□ -0.74
RNU1-56P-201ENST00000391303 PIK3C2GO75747 1445 aa10.4□□□□□ -0.75
RNU1-56P-201ENST00000391303 COL16A1Q07092 1604 aaPredicted RBP10.4□□□□□ -0.75
RNU1-56P-201ENST00000391303 RAB3GAP2Q9H2M9 1393 aa10.39□□□□□ -0.75
RNU1-56P-201ENST00000391303 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.39□□□□□ -0.75
RNU1-56P-201ENST00000391303 C14orf93Q9H972 538 aaKnown RBP10.39□□□□□ -0.75
RNU1-56P-201ENST00000391303 SOS2Q07890 1332 aaPredicted RBP10.38□□□□□ -0.75
RNU1-56P-201ENST00000391303 POTEAQ6S8J7 498 aa10.38□□□□□ -0.75
RNU1-56P-201ENST00000391303 NPHP3Q7Z494 1330 aa10.37□□□□□ -0.75
RNU1-56P-201ENST00000391303 MYOM2P54296 1465 aa10.37□□□□□ -0.75
RNU1-56P-201ENST00000391303 MEX3CQ5U5Q3 659 aaKnown RBP10.37□□□□□ -0.75
RNU1-56P-201ENST00000391303 KIF1BO60333 1816 aa10.37□□□□□ -0.75
RNU1-56P-201ENST00000391303 NRXN1Q9ULB1 1477 aa10.36□□□□□ -0.75
RNU1-56P-201ENST00000391303 DHX57Q6P158 1386 aaKnown RBP10.36□□□□□ -0.75
RNU1-56P-201ENST00000391303 PHLPP1O60346 1717 aa10.36□□□□□ -0.75
RNU1-56P-201ENST00000391303 PNPLA6Q8IY17 1366 aa10.35□□□□□ -0.75
RNU1-56P-201ENST00000391303 YTHDC2Q9H6S0 1430 aaKnown RBP10.34□□□□□ -0.75
RNU1-56P-201ENST00000391303 ORAI2Q96SN7 254 aa10.34□□□□□ -0.75
RNU1-56P-201ENST00000391303 CDC42BPGQ6DT37 1551 aa10.34□□□□□ -0.75
RNU1-56P-201ENST00000391303 LRP6O75581 1613 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms