RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 UNC13BO14795 1591 aa16.37■□□□□ 0.21
TRAV4-201ENST00000390426 PPP1R15AO75807 674 aaPredicted RBP16.36■□□□□ 0.21
TRAV4-201ENST00000390426 NUP155O75694 1391 aa16.36■□□□□ 0.21
TRAV4-201ENST00000390426 TMEM94Q12767 1356 aa16.36■□□□□ 0.21
TRAV4-201ENST00000390426 RIMS2Q9UQ26 1411 aa16.36■□□□□ 0.21
TRAV4-201ENST00000390426 MED1Q15648 1581 aaPredicted RBP16.34■□□□□ 0.21
TRAV4-201ENST00000390426 HDGFP51858 240 aaKnown RBP16.34■□□□□ 0.21
TRAV4-201ENST00000390426 NUTM2DQ5VT03 806 aaPredicted RBP16.34■□□□□ 0.21
TRAV4-201ENST00000390426 ZFYVE9O95405 1425 aa16.34■□□□□ 0.21
TRAV4-201ENST00000390426 GCC2Q8IWJ2 1684 aa16.34■□□□□ 0.21
TRAV4-201ENST00000390426 XIRP1Q702N8 1843 aaKnown RBP16.33■□□□□ 0.2
TRAV4-201ENST00000390426 E9PCH4 1651 aa16.32■□□□□ 0.2
TRAV4-201ENST00000390426 PLEKHG1Q9ULL1 1385 aa16.32■□□□□ 0.2
TRAV4-201ENST00000390426 TMEM131LA2VDJ0 1609 aa16.31■□□□□ 0.2
TRAV4-201ENST00000390426 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.31■□□□□ 0.2
TRAV4-201ENST00000390426 IQGAP3Q86VI3 1631 aa16.3■□□□□ 0.2
TRAV4-201ENST00000390426 MYO5BQ9ULV0 1848 aa16.3■□□□□ 0.2
TRAV4-201ENST00000390426 TBX22Q9Y458 520 aa16.28■□□□□ 0.2
TRAV4-201ENST00000390426 FAM135BQ49AJ0 1406 aa16.28■□□□□ 0.2
TRAV4-201ENST00000390426 NWD1Q149M9 1564 aa16.27■□□□□ 0.2
TRAV4-201ENST00000390426 NKTRP30414 1462 aaKnown RBP16.27■□□□□ 0.19
TRAV4-201ENST00000390426 MSH6P52701 1360 aa16.26■□□□□ 0.19
TRAV4-201ENST00000390426 ADAMTS13Q76LX8 1427 aa16.24■□□□□ 0.19
TRAV4-201ENST00000390426 RRBP1Q9P2E9 1410 aaKnown RBP16.24■□□□□ 0.19
TRAV4-201ENST00000390426 ZNF326Q5BKZ1 582 aaKnown RBP16.22■□□□□ 0.19
TRAV4-201ENST00000390426 SLAIN2Q9P270 581 aa16.22■□□□□ 0.19
TRAV4-201ENST00000390426 CHD2O14647 1828 aaKnown RBP16.22■□□□□ 0.19
TRAV4-201ENST00000390426 C14orf37Q86TY3 774 aa16.21■□□□□ 0.19
TRAV4-201ENST00000390426 ROBO1Q9Y6N7 1651 aa16.2■□□□□ 0.18
TRAV4-201ENST00000390426 NAIPQ13075 1403 aa16.19■□□□□ 0.18
TRAV4-201ENST00000390426 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
TRAV4-201ENST00000390426 AMOTL2Q9Y2J4 779 aa16.19■□□□□ 0.18
TRAV4-201ENST00000390426 PIK3R4Q99570 1358 aa16.18■□□□□ 0.18
TRAV4-201ENST00000390426 DIP2AQ14689 1571 aa16.17■□□□□ 0.18
TRAV4-201ENST00000390426 RGS17Q9UGC6 210 aaPredicted RBP16.17■□□□□ 0.18
TRAV4-201ENST00000390426 PTPRUQ92729 1446 aa16.17■□□□□ 0.18
TRAV4-201ENST00000390426 NCOA3Q9Y6Q9 1424 aa16.17■□□□□ 0.18
TRAV4-201ENST00000390426 SPHKAPQ2M3C7 1700 aa16.16■□□□□ 0.18
TRAV4-201ENST00000390426 TRPM2O94759 1503 aa16.15■□□□□ 0.18
TRAV4-201ENST00000390426 C19orf44Q9H6X5 657 aa16.15■□□□□ 0.18
TRAV4-201ENST00000390426 ATF3P18847 181 aa16.14■□□□□ 0.17
TRAV4-201ENST00000390426 CADPS2Q86UW7 1296 aa16.14■□□□□ 0.17
TRAV4-201ENST00000390426 CLTCL1P53675 1640 aa16.12■□□□□ 0.17
TRAV4-201ENST00000390426 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
TRAV4-201ENST00000390426 METP08581 1390 aa16.12■□□□□ 0.17
TRAV4-201ENST00000390426 HFM1A2PYH4 1435 aa16.11■□□□□ 0.17
TRAV4-201ENST00000390426 SETBP1Q9Y6X0 1596 aa16.1■□□□□ 0.17
TRAV4-201ENST00000390426 NRXN3Q9Y4C0 1643 aa16.1■□□□□ 0.17
TRAV4-201ENST00000390426 PHLPP1O60346 1717 aa16.1■□□□□ 0.17
TRAV4-201ENST00000390426 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.1■□□□□ 0.17
TRAV4-201ENST00000390426 JCADQ9P266 1359 aa16.1■□□□□ 0.17
TRAV4-201ENST00000390426 NEXMIFQ5QGS0 1516 aa16.09■□□□□ 0.17
TRAV4-201ENST00000390426 POTEAQ6S8J7 498 aa16.08■□□□□ 0.16
TRAV4-201ENST00000390426 FOXD1Q16676 465 aa16.07■□□□□ 0.16
TRAV4-201ENST00000390426 BRINP3Q76B58 766 aa16.07■□□□□ 0.16
TRAV4-201ENST00000390426 XRN1Q8IZH2 1706 aaKnown RBP16.05■□□□□ 0.16
TRAV4-201ENST00000390426 VGFO15240 615 aaPredicted RBP16.05■□□□□ 0.16
TRAV4-201ENST00000390426 COL16A1Q07092 1604 aaPredicted RBP16.05■□□□□ 0.16
TRAV4-201ENST00000390426 KIF1BO60333 1816 aa16.04■□□□□ 0.16
TRAV4-201ENST00000390426 DCCP43146 1447 aa16.03■□□□□ 0.16
TRAV4-201ENST00000390426 RPGRIP1LQ68CZ1 1315 aa16.03■□□□□ 0.16
TRAV4-201ENST00000390426 AHDC1Q5TGY3 1603 aaPredicted RBP16.02■□□□□ 0.16
TRAV4-201ENST00000390426 MST1RQ04912 1400 aa16.02■□□□□ 0.15
TRAV4-201ENST00000390426 SPATA31A6Q5VVP1 1343 aa16.01■□□□□ 0.15
TRAV4-201ENST00000390426 MEX3CQ5U5Q3 659 aaKnown RBP16.01■□□□□ 0.15
TRAV4-201ENST00000390426 ADGRL3Q9HAR2 1447 aa16■□□□□ 0.15
TRAV4-201ENST00000390426 LRP6O75581 1613 aa15.99■□□□□ 0.15
TRAV4-201ENST00000390426 NUTM2BA6NNL0 878 aaPredicted RBP15.99■□□□□ 0.15
TRAV4-201ENST00000390426 NUTM2EB1AL46 878 aaPredicted RBP15.99■□□□□ 0.15
TRAV4-201ENST00000390426 RGL3Q3MIN7 710 aa15.99■□□□□ 0.15
TRAV4-201ENST00000390426 NUTM2AQ8IVF1 878 aaPredicted RBP15.99■□□□□ 0.15
TRAV4-201ENST00000390426 DDX17Q92841 729 aaKnown RBP15.99■□□□□ 0.15
TRAV4-201ENST00000390426 MPHOSPH9Q99550 1183 aa15.99■□□□□ 0.15
TRAV4-201ENST00000390426 ASXL1Q8IXJ9 1541 aa15.99■□□□□ 0.15
TRAV4-201ENST00000390426 ROBO2Q9HCK4 1378 aa15.98■□□□□ 0.15
TRAV4-201ENST00000390426 ADGRF5Q8IZF2 1346 aa15.96■□□□□ 0.15
TRAV4-201ENST00000390426 CCDC144AA2RUR9 1427 aa15.96■□□□□ 0.15
TRAV4-201ENST00000390426 PTCH1Q13635 1447 aa15.94■□□□□ 0.14
TRAV4-201ENST00000390426 NALCNQ8IZF0 1738 aa15.94■□□□□ 0.14
TRAV4-201ENST00000390426 LRRC59Q96AG4 307 aaKnown RBP15.94■□□□□ 0.14
TRAV4-201ENST00000390426 C1orf167Q5SNV9 1468 aa15.94■□□□□ 0.14
TRAV4-201ENST00000390426 SHPRHQ149N8 1683 aa15.94■□□□□ 0.14
TRAV4-201ENST00000390426 SETD1AO15047 1707 aaKnown RBP15.94■□□□□ 0.14
TRAV4-201ENST00000390426 SETD5Q9C0A6 1442 aa15.94■□□□□ 0.14
TRAV4-201ENST00000390426 PPLO60437 1756 aa15.93■□□□□ 0.14
TRAV4-201ENST00000390426 ZNF772Q68DY9 489 aaPredicted RBP15.93■□□□□ 0.14
TRAV4-201ENST00000390426 ORAI2Q96SN7 254 aa15.93■□□□□ 0.14
TRAV4-201ENST00000390426 STK26Q9P289 416 aa15.93■□□□□ 0.14
TRAV4-201ENST00000390426 NHSL1Q5SYE7 1610 aa15.91■□□□□ 0.14
TRAV4-201ENST00000390426 SPATA31E1Q6ZUB1 1445 aa15.91■□□□□ 0.14
TRAV4-201ENST00000390426 ANKRD30BQ9BXX2 1392 aa15.89■□□□□ 0.13
TRAV4-201ENST00000390426 PRAG1Q86YV5 1406 aa15.89■□□□□ 0.13
TRAV4-201ENST00000390426 TMEM132EQ6IEE7 984 aa15.89■□□□□ 0.13
TRAV4-201ENST00000390426 WAPLQ7Z5K2 1190 aa15.89■□□□□ 0.13
TRAV4-201ENST00000390426 PNPLA6Q8IY17 1366 aa15.88■□□□□ 0.13
TRAV4-201ENST00000390426 AFF2P51816 1311 aa15.88■□□□□ 0.13
TRAV4-201ENST00000390426 RXRBP28702 533 aa15.87■□□□□ 0.13
TRAV4-201ENST00000390426 ESCO1Q5FWF5 840 aa15.86■□□□□ 0.13
TRAV4-201ENST00000390426 C8orf37Q96NL8 207 aa15.86■□□□□ 0.13
TRAV4-201ENST00000390426 SOS2Q07890 1332 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms