RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 LOC105371045A0A1W2PR82 267 aa18.66■□□□□ 0.58
SOD1-202ENST00000389995 GCC2Q8IWJ2 1684 aa18.66■□□□□ 0.58
SOD1-202ENST00000389995 DAPK1P53355 1430 aa18.66■□□□□ 0.58
SOD1-202ENST00000389995 JCADQ9P266 1359 aa18.65■□□□□ 0.58
SOD1-202ENST00000389995 LMTK2Q8IWU2 1503 aa18.64■□□□□ 0.58
SOD1-202ENST00000389995 LRP6O75581 1613 aa18.64■□□□□ 0.57
SOD1-202ENST00000389995 NOS1P29475 1434 aa18.63■□□□□ 0.57
SOD1-202ENST00000389995 TRIM52Q96A61 297 aa18.62■□□□□ 0.57
SOD1-202ENST00000389995 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.6■□□□□ 0.57
SOD1-202ENST00000389995 UPF1Q92900 1129 aaKnown RBP eCLIP18.59■□□□□ 0.57
SOD1-202ENST00000389995 MEX3CQ5U5Q3 659 aaKnown RBP18.58■□□□□ 0.56
SOD1-202ENST00000389995 ZFYVE9O95405 1425 aa18.57■□□□□ 0.56
SOD1-202ENST00000389995 ANKRD30AQ9BXX3 1397 aa18.57■□□□□ 0.56
SOD1-202ENST00000389995 SHPRHQ149N8 1683 aa18.57■□□□□ 0.56
SOD1-202ENST00000389995 TMEM131LA2VDJ0 1609 aa18.57■□□□□ 0.56
SOD1-202ENST00000389995 SRCAPQ6ZRS2 3230 aa18.57■□□□□ 0.56
SOD1-202ENST00000389995 PPP1R15AO75807 674 aaPredicted RBP18.56■□□□□ 0.56
SOD1-202ENST00000389995 NUTM2DQ5VT03 806 aaPredicted RBP18.56■□□□□ 0.56
SOD1-202ENST00000389995 C14orf37Q86TY3 774 aa18.56■□□□□ 0.56
SOD1-202ENST00000389995 FGD6Q6ZV73 1430 aa18.56■□□□□ 0.56
SOD1-202ENST00000389995 RIMS2Q9UQ26 1411 aa18.56■□□□□ 0.56
SOD1-202ENST00000389995 PLEKHG1Q9ULL1 1385 aa18.55■□□□□ 0.56
SOD1-202ENST00000389995 SLC52A1Q9NWF4 448 aa18.55■□□□□ 0.56
SOD1-202ENST00000389995 AHDC1Q5TGY3 1603 aaPredicted RBP18.52■□□□□ 0.56
SOD1-202ENST00000389995 SPATA31A6Q5VVP1 1343 aa18.52■□□□□ 0.56
SOD1-202ENST00000389995 CHGAP10645 457 aaKnown RBP18.52■□□□□ 0.56
SOD1-202ENST00000389995 NUTM2BA6NNL0 878 aaPredicted RBP18.51■□□□□ 0.55
SOD1-202ENST00000389995 NUTM2EB1AL46 878 aaPredicted RBP18.51■□□□□ 0.55
SOD1-202ENST00000389995 ZNF772Q68DY9 489 aaPredicted RBP18.51■□□□□ 0.55
SOD1-202ENST00000389995 NUTM2AQ8IVF1 878 aaPredicted RBP18.51■□□□□ 0.55
SOD1-202ENST00000389995 DIP2AQ14689 1571 aa18.5■□□□□ 0.55
SOD1-202ENST00000389995 TBX22Q9Y458 520 aa18.49■□□□□ 0.55
SOD1-202ENST00000389995 E9PCH4 1651 aa18.49■□□□□ 0.55
SOD1-202ENST00000389995 ADAMTS13Q76LX8 1427 aa18.49■□□□□ 0.55
SOD1-202ENST00000389995 RPRD2Q5VT52 1461 aaKnown RBP18.48■□□□□ 0.55
SOD1-202ENST00000389995 RXRBP28702 533 aa18.48■□□□□ 0.55
SOD1-202ENST00000389995 ATF3P18847 181 aa18.47■□□□□ 0.55
SOD1-202ENST00000389995 ADGRL2O95490 1459 aa18.46■□□□□ 0.55
SOD1-202ENST00000389995 APLP2Q06481 763 aa18.46■□□□□ 0.55
SOD1-202ENST00000389995 CADPS2Q86UW7 1296 aa18.46■□□□□ 0.55
SOD1-202ENST00000389995 C19orf44Q9H6X5 657 aa18.46■□□□□ 0.55
SOD1-202ENST00000389995 HDGFP51858 240 aaKnown RBP18.45■□□□□ 0.54
SOD1-202ENST00000389995 BRINP3Q76B58 766 aa18.45■□□□□ 0.54
SOD1-202ENST00000389995 ANKRD50Q9ULJ7 1429 aa18.45■□□□□ 0.54
SOD1-202ENST00000389995 NCOA3Q9Y6Q9 1424 aa18.45■□□□□ 0.54
SOD1-202ENST00000389995 PTPRUQ92729 1446 aa18.44■□□□□ 0.54
SOD1-202ENST00000389995 AFF2P51816 1311 aa18.44■□□□□ 0.54
SOD1-202ENST00000389995 FAM50AQ14320 339 aaKnown RBP18.43■□□□□ 0.54
SOD1-202ENST00000389995 NHSL1Q5SYE7 1610 aa18.42■□□□□ 0.54
SOD1-202ENST00000389995 AMOTL2Q9Y2J4 779 aa18.42■□□□□ 0.54
SOD1-202ENST00000389995 UNC13BO14795 1591 aa18.42■□□□□ 0.54
SOD1-202ENST00000389995 TRPM2O94759 1503 aa18.41■□□□□ 0.54
SOD1-202ENST00000389995 ASXL1Q8IXJ9 1541 aa18.41■□□□□ 0.54
SOD1-202ENST00000389995 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.41■□□□□ 0.54
SOD1-202ENST00000389995 DDX17Q92841 729 aaKnown RBP18.4■□□□□ 0.54
SOD1-202ENST00000389995 NRXN3Q9Y4C0 1643 aa18.39■□□□□ 0.53
SOD1-202ENST00000389995 CDK12Q9NYV4 1490 aaPredicted RBP18.39■□□□□ 0.53
SOD1-202ENST00000389995 XRN1Q8IZH2 1706 aaKnown RBP18.38■□□□□ 0.53
SOD1-202ENST00000389995 PIK3R4Q99570 1358 aa18.38■□□□□ 0.53
SOD1-202ENST00000389995 RGS12O14924 1447 aa18.38■□□□□ 0.53
SOD1-202ENST00000389995 C8orf37Q96NL8 207 aa18.37■□□□□ 0.53
SOD1-202ENST00000389995 MST1RQ04912 1400 aa18.36■□□□□ 0.53
SOD1-202ENST00000389995 EP400Q96L91 3159 aa18.36■□□□□ 0.53
SOD1-202ENST00000389995 IQGAP3Q86VI3 1631 aa18.35■□□□□ 0.53
SOD1-202ENST00000389995 NALCNQ8IZF0 1738 aa18.35■□□□□ 0.53
SOD1-202ENST00000389995 SETD5Q9C0A6 1442 aa18.34■□□□□ 0.53
SOD1-202ENST00000389995 QTRT2Q9H974 415 aaKnown RBP18.34■□□□□ 0.53
SOD1-202ENST00000389995 DCCP43146 1447 aa18.32■□□□□ 0.52
SOD1-202ENST00000389995 METP08581 1390 aa18.3■□□□□ 0.52
SOD1-202ENST00000389995 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
SOD1-202ENST00000389995 SPHKAPQ2M3C7 1700 aa18.3■□□□□ 0.52
SOD1-202ENST00000389995 ADAMTS2O95450 1211 aa18.3■□□□□ 0.52
SOD1-202ENST00000389995 RBM6P78332 1123 aaKnown RBP18.3■□□□□ 0.52
SOD1-202ENST00000389995 LRRC59Q96AG4 307 aaKnown RBP18.3■□□□□ 0.52
SOD1-202ENST00000389995 SETBP1Q9Y6X0 1596 aa18.3■□□□□ 0.52
SOD1-202ENST00000389995 NGLY1Q96IV0 654 aa18.27■□□□□ 0.52
SOD1-202ENST00000389995 ZNF326Q5BKZ1 582 aaKnown RBP18.26■□□□□ 0.51
SOD1-202ENST00000389995 NUP155O75694 1391 aa18.26■□□□□ 0.51
SOD1-202ENST00000389995 ADGRL3Q9HAR2 1447 aa18.24■□□□□ 0.51
SOD1-202ENST00000389995 ITGAEP38570 1179 aa18.22■□□□□ 0.51
SOD1-202ENST00000389995 C1orf167Q5SNV9 1468 aa18.21■□□□□ 0.51
SOD1-202ENST00000389995 LAMC1P11047 1609 aa18.21■□□□□ 0.51
SOD1-202ENST00000389995 CLTCL1P53675 1640 aa18.21■□□□□ 0.51
SOD1-202ENST00000389995 USP21Q9UK80 565 aa18.21■□□□□ 0.51
SOD1-202ENST00000389995 KIF1BO60333 1816 aa18.21■□□□□ 0.51
SOD1-202ENST00000389995 ATAD2Q6PL18 1390 aa18.2■□□□□ 0.5
SOD1-202ENST00000389995 NEXMIFQ5QGS0 1516 aa18.2■□□□□ 0.5
SOD1-202ENST00000389995 ORAI2Q96SN7 254 aa18.2■□□□□ 0.5
SOD1-202ENST00000389995 MARF1Q9Y4F3 1742 aaKnown RBP18.19■□□□□ 0.5
SOD1-202ENST00000389995 ROCK1Q13464 1354 aa18.18■□□□□ 0.5
SOD1-202ENST00000389995 TRPC5Q9UL62 973 aaPredicted RBP18.16■□□□□ 0.5
SOD1-202ENST00000389995 SOS2Q07890 1332 aaPredicted RBP18.15■□□□□ 0.5
SOD1-202ENST00000389995 COL22A1Q8NFW1 1626 aaPredicted RBP18.15■□□□□ 0.5
SOD1-202ENST00000389995 ZRANB1Q9UGI0 708 aa18.14■□□□□ 0.49
SOD1-202ENST00000389995 ROBO2Q9HCK4 1378 aa18.14■□□□□ 0.49
SOD1-202ENST00000389995 ATRNO75882 1429 aa18.14■□□□□ 0.49
SOD1-202ENST00000389995 BRWD3Q6RI45 1802 aa18.13■□□□□ 0.49
SOD1-202ENST00000389995 FNBP4Q8N3X1 1017 aaPredicted RBP18.12■□□□□ 0.49
SOD1-202ENST00000389995 PTCH1Q13635 1447 aa18.11■□□□□ 0.49
SOD1-202ENST00000389995 XPCQ01831 940 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms