RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 UBTFP17480 764 aaKnown RBP10.43□□□□□ -0.74
RNU6-40P-201ENST00000384254 ZBED2Q9BTP6 218 aa10.43□□□□□ -0.74
RNU6-40P-201ENST00000384254 RIC3Q7Z5B4 369 aa10.42□□□□□ -0.74
RNU6-40P-201ENST00000384254 SPIRE2Q8WWL2 714 aa10.42□□□□□ -0.74
RNU6-40P-201ENST00000384254 C3orf80F5H4A9 247 aa10.41□□□□□ -0.74
RNU6-40P-201ENST00000384254 PBX2P40425 430 aa10.41□□□□□ -0.74
RNU6-40P-201ENST00000384254 PSEN2P49810 448 aa10.41□□□□□ -0.74
RNU6-40P-201ENST00000384254 EMP3P54852 163 aa10.41□□□□□ -0.74
RNU6-40P-201ENST00000384254 LHX8Q68G74 356 aa10.41□□□□□ -0.74
RNU6-40P-201ENST00000384254 RABGEF1Q9UJ41 708 aa10.41□□□□□ -0.74
RNU6-40P-201ENST00000384254 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.4□□□□□ -0.74
RNU6-40P-201ENST00000384254 MCM6Q14566 821 aa10.39□□□□□ -0.75
RNU6-40P-201ENST00000384254 HOMEZQ8IX15 550 aa10.39□□□□□ -0.75
RNU6-40P-201ENST00000384254 SLC4A5Q9BY07 1137 aa10.38□□□□□ -0.75
RNU6-40P-201ENST00000384254 RAD21O60216 631 aa10.37□□□□□ -0.75
RNU6-40P-201ENST00000384254 LIMD1Q9UGP4 676 aa10.37□□□□□ -0.75
RNU6-40P-201ENST00000384254 SPTLC1O15269 473 aa10.36□□□□□ -0.75
RNU6-40P-201ENST00000384254 KDM4AO75164 1064 aa10.36□□□□□ -0.75
RNU6-40P-201ENST00000384254 RFC5P40937 340 aa10.36□□□□□ -0.75
RNU6-40P-201ENST00000384254 USP46P62068 366 aa10.36□□□□□ -0.75
RNU6-40P-201ENST00000384254 TUSC1Q2TAM9 212 aa10.36□□□□□ -0.75
RNU6-40P-201ENST00000384254 TMEM259Q4ZIN3 620 aa10.36□□□□□ -0.75
RNU6-40P-201ENST00000384254 RSBN1LQ6PCB5 846 aaPredicted RBP10.36□□□□□ -0.75
RNU6-40P-201ENST00000384254 SEPT9Q9UHD8 586 aaPredicted RBP10.36□□□□□ -0.75
RNU6-40P-201ENST00000384254 ST18O60284 1047 aa10.35□□□□□ -0.75
RNU6-40P-201ENST00000384254 GJA5P36382 358 aa10.35□□□□□ -0.75
RNU6-40P-201ENST00000384254 CSPP1Q1MSJ5 1256 aa10.35□□□□□ -0.75
RNU6-40P-201ENST00000384254 SWT1Q5T5J6 900 aaKnown RBP10.35□□□□□ -0.75
RNU6-40P-201ENST00000384254 NBPF3Q9H094 633 aa10.35□□□□□ -0.75
RNU6-40P-201ENST00000384254 AXIN2Q9Y2T1 843 aa10.35□□□□□ -0.75
RNU6-40P-201ENST00000384254 MOXD2PA6NHM9 499 aa10.34□□□□□ -0.75
RNU6-40P-201ENST00000384254 SPDYE5A6NIY4 337 aa10.34□□□□□ -0.75
RNU6-40P-201ENST00000384254 A6NJR5 290 aa10.34□□□□□ -0.75
RNU6-40P-201ENST00000384254 FAM98CQ17RN3 349 aaKnown RBP10.34□□□□□ -0.75
RNU6-40P-201ENST00000384254 BANK1Q8NDB2 785 aa10.34□□□□□ -0.75
RNU6-40P-201ENST00000384254 NUTM2BA6NNL0 878 aaPredicted RBP10.33□□□□□ -0.76
RNU6-40P-201ENST00000384254 NUTM2EB1AL46 878 aaPredicted RBP10.33□□□□□ -0.76
RNU6-40P-201ENST00000384254 NUTM2DQ5VT03 806 aaPredicted RBP10.33□□□□□ -0.76
RNU6-40P-201ENST00000384254 DMRTA1Q5VZB9 504 aa10.33□□□□□ -0.76
RNU6-40P-201ENST00000384254 NUTM2AQ8IVF1 878 aaPredicted RBP10.33□□□□□ -0.76
RNU6-40P-201ENST00000384254 SLF2Q8IX21 1173 aa10.33□□□□□ -0.76
RNU6-40P-201ENST00000384254 CLUAP1Q96AJ1 413 aa10.33□□□□□ -0.76
RNU6-40P-201ENST00000384254 APBB1O00213 710 aa10.32□□□□□ -0.76
RNU6-40P-201ENST00000384254 GCGRP47871 477 aa10.32□□□□□ -0.76
RNU6-40P-201ENST00000384254 PPP2R2DQ66LE6 453 aa10.32□□□□□ -0.76
RNU6-40P-201ENST00000384254 ZNF687Q8N1G0 1237 aa10.32□□□□□ -0.76
RNU6-40P-201ENST00000384254 MARVELD3Q96A59 401 aa10.32□□□□□ -0.76
RNU6-40P-201ENST00000384254 FAM205CA6NFA0 338 aa10.31□□□□□ -0.76
RNU6-40P-201ENST00000384254 RNF40O75150 1001 aa10.31□□□□□ -0.76
RNU6-40P-201ENST00000384254 NDUFV2P19404 249 aa10.31□□□□□ -0.76
RNU6-40P-201ENST00000384254 GRIPAP1Q4V328 841 aa10.31□□□□□ -0.76
RNU6-40P-201ENST00000384254 LAPTM4BQ86VI4 370 aa10.31□□□□□ -0.76
RNU6-40P-201ENST00000384254 VPS9D1Q9Y2B5 631 aa10.31□□□□□ -0.76
RNU6-40P-201ENST00000384254 PRM3Q9NNZ6 103 aa10.3□□□□□ -0.76
RNU6-40P-201ENST00000384254 HOXA2O43364 376 aa10.29□□□□□ -0.76
RNU6-40P-201ENST00000384254 PRPF38BQ5VTL8 546 aaKnown RBP10.29□□□□□ -0.76
RNU6-40P-201ENST00000384254 NECTIN2Q92692 538 aa10.29□□□□□ -0.76
RNU6-40P-201ENST00000384254 ZBTB3Q9H5J0 574 aa10.29□□□□□ -0.76
RNU6-40P-201ENST00000384254 FDX1P10109 184 aa10.28□□□□□ -0.76
RNU6-40P-201ENST00000384254 POTEEQ6S8J3 1075 aa10.28□□□□□ -0.76
RNU6-40P-201ENST00000384254 PROSER2Q86WR7 435 aaPredicted RBP10.28□□□□□ -0.76
RNU6-40P-201ENST00000384254 TRAK2O60296 914 aa10.27□□□□□ -0.77
RNU6-40P-201ENST00000384254 LILRB3O75022 631 aa10.27□□□□□ -0.77
RNU6-40P-201ENST00000384254 SAMD7Q7Z3H4 446 aa10.27□□□□□ -0.77
RNU6-40P-201ENST00000384254 WWC1Q8IX03 1113 aa10.27□□□□□ -0.77
RNU6-40P-201ENST00000384254 ARID3CA6NKF2 412 aa10.26□□□□□ -0.77
RNU6-40P-201ENST00000384254 TK2O00142 265 aa10.26□□□□□ -0.77
RNU6-40P-201ENST00000384254 AP1G2O75843 785 aa10.26□□□□□ -0.77
RNU6-40P-201ENST00000384254 SLC10A3P09131 477 aa10.26□□□□□ -0.77
RNU6-40P-201ENST00000384254 QPCTQ16769 361 aa10.26□□□□□ -0.77
RNU6-40P-201ENST00000384254 MRPL50Q8N5N7 158 aaKnown RBP10.26□□□□□ -0.77
RNU6-40P-201ENST00000384254 FAM163AQ96GL9 167 aaPredicted RBP10.26□□□□□ -0.77
RNU6-40P-201ENST00000384254 STAC3Q96MF2 364 aa10.26□□□□□ -0.77
RNU6-40P-201ENST00000384254 ARID3AQ99856 593 aa10.26□□□□□ -0.77
RNU6-40P-201ENST00000384254 CFHP08603 1231 aa10.25□□□□□ -0.77
RNU6-40P-201ENST00000384254 SNRKQ9NRH2 765 aa10.25□□□□□ -0.77
RNU6-40P-201ENST00000384254 PCDHB15Q9Y5E8 787 aa10.25□□□□□ -0.77
RNU6-40P-201ENST00000384254 KMT5BQ4FZB7 885 aa10.24□□□□□ -0.77
RNU6-40P-201ENST00000384254 HS3ST6Q96QI5 342 aa10.24□□□□□ -0.77
RNU6-40P-201ENST00000384254 CABLES1Q8TDN4 633 aa10.23□□□□□ -0.77
RNU6-40P-201ENST00000384254 ZFRQ96KR1 1074 aaKnown RBP10.23□□□□□ -0.77
RNU6-40P-201ENST00000384254 HRCP23327 699 aa10.22□□□□□ -0.77
RNU6-40P-201ENST00000384254 MTMR2Q13614 643 aa10.22□□□□□ -0.77
RNU6-40P-201ENST00000384254 RTL5Q5HYW3 569 aaPredicted RBP10.22□□□□□ -0.77
RNU6-40P-201ENST00000384254 POM121Q96HA1 1249 aa10.22□□□□□ -0.77
RNU6-40P-201ENST00000384254 LRCH3Q96II8 777 aa10.22□□□□□ -0.77
RNU6-40P-201ENST00000384254 COG6Q9Y2V7 657 aa10.22□□□□□ -0.77
RNU6-40P-201ENST00000384254 GOLGA8CPA6NN73 597 aa10.21□□□□□ -0.77
RNU6-40P-201ENST00000384254 SOCS7O14512 581 aa10.21□□□□□ -0.77
RNU6-40P-201ENST00000384254 FUT2Q10981 343 aa10.21□□□□□ -0.77
RNU6-40P-201ENST00000384254 FBXO31Q5XUX0 539 aaPredicted RBP10.21□□□□□ -0.77
RNU6-40P-201ENST00000384254 HELBQ8NG08 1087 aaPredicted RBP10.21□□□□□ -0.77
RNU6-40P-201ENST00000384254 PRR14Q9BWN1 585 aa10.21□□□□□ -0.77
RNU6-40P-201ENST00000384254 C6orf229H3BNL8 230 aa10.2□□□□□ -0.78
RNU6-40P-201ENST00000384254 USP17L8P0C7I0 530 aa10.2□□□□□ -0.78
RNU6-40P-201ENST00000384254 ATP6V1AP38606 617 aa10.2□□□□□ -0.78
RNU6-40P-201ENST00000384254 LSM11P83369 360 aaKnown RBP eCLIP10.2□□□□□ -0.78
RNU6-40P-201ENST00000384254 ADGRD1Q6QNK2 874 aa10.2□□□□□ -0.78
RNU6-40P-201ENST00000384254 MTMR14Q8NCE2 650 aa10.2□□□□□ -0.78
RNU6-40P-201ENST00000384254 TSC1Q92574 1164 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms