RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 RPGRIP1LQ68CZ1 1315 aa22.49■■□□□ 1.19
PDGFB-202ENST00000381551 CLSPNQ9HAW4 1339 aa22.49■■□□□ 1.19
PDGFB-202ENST00000381551 NEURL4Q96JN8 1562 aa22.47■■□□□ 1.19
PDGFB-202ENST00000381551 EID1Q9Y6B2 187 aa22.47■■□□□ 1.19
PDGFB-202ENST00000381551 NCKAP5LQ9HCH0 1330 aa22.47■■□□□ 1.19
PDGFB-202ENST00000381551 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.46■■□□□ 1.19
PDGFB-202ENST00000381551 ZFYVE9O95405 1425 aa22.46■■□□□ 1.19
PDGFB-202ENST00000381551 RIMS2Q9UQ26 1411 aa22.46■■□□□ 1.19
PDGFB-202ENST00000381551 NUTM2DQ5VT03 806 aaPredicted RBP22.45■■□□□ 1.18
PDGFB-202ENST00000381551 VGFO15240 615 aaPredicted RBP22.41■■□□□ 1.18
PDGFB-202ENST00000381551 SCAF11Q99590 1463 aaKnown RBP22.41■■□□□ 1.18
PDGFB-202ENST00000381551 STRCQ7RTU9 1775 aa22.4■■□□□ 1.18
PDGFB-202ENST00000381551 NEXMIFQ5QGS0 1516 aa22.4■■□□□ 1.18
PDGFB-202ENST00000381551 PPP1R15AO75807 674 aaPredicted RBP22.39■■□□□ 1.17
PDGFB-202ENST00000381551 DCAF11Q8TEB1 546 aa22.38■■□□□ 1.17
PDGFB-202ENST00000381551 L3MBTL2Q969R5 705 aa22.38■■□□□ 1.17
PDGFB-202ENST00000381551 MED14O60244 1454 aa22.38■■□□□ 1.17
PDGFB-202ENST00000381551 STAC3Q96MF2 364 aa22.37■■□□□ 1.17
PDGFB-202ENST00000381551 DMRT2Q9Y5R5 561 aa22.37■■□□□ 1.17
PDGFB-202ENST00000381551 ADGRF5Q8IZF2 1346 aa22.35■■□□□ 1.17
PDGFB-202ENST00000381551 NPHP4O75161 1426 aaPredicted RBP22.35■■□□□ 1.17
PDGFB-202ENST00000381551 FBXO41Q8TF61 875 aa22.35■■□□□ 1.17
PDGFB-202ENST00000381551 KDM2AQ9Y2K7 1162 aa22.35■■□□□ 1.17
PDGFB-202ENST00000381551 PLEKHG1Q9ULL1 1385 aa22.35■■□□□ 1.17
PDGFB-202ENST00000381551 PPLO60437 1756 aa22.35■■□□□ 1.17
PDGFB-202ENST00000381551 POLR1AO95602 1720 aaPredicted RBP22.34■■□□□ 1.17
PDGFB-202ENST00000381551 BCANQ96GW7 911 aa22.33■■□□□ 1.17
PDGFB-202ENST00000381551 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
PDGFB-202ENST00000381551 IFT172Q9UG01 1749 aa22.32■■□□□ 1.16
PDGFB-202ENST00000381551 TONSLQ96HA7 1378 aa22.31■■□□□ 1.16
PDGFB-202ENST00000381551 TIMELESSQ9UNS1 1208 aa22.31■■□□□ 1.16
PDGFB-202ENST00000381551 SLC26A8Q96RN1 970 aa22.3■■□□□ 1.16
PDGFB-202ENST00000381551 MYOM2P54296 1465 aa22.28■■□□□ 1.16
PDGFB-202ENST00000381551 TBX22Q9Y458 520 aa22.28■■□□□ 1.16
PDGFB-202ENST00000381551 NRXN1Q9ULB1 1477 aa22.28■■□□□ 1.16
PDGFB-202ENST00000381551 IQGAP1P46940 1657 aa22.27■■□□□ 1.16
PDGFB-202ENST00000381551 ADAMTS13Q76LX8 1427 aa22.27■■□□□ 1.16
PDGFB-202ENST00000381551 C14orf93Q9H972 538 aaKnown RBP22.25■■□□□ 1.15
PDGFB-202ENST00000381551 SETBP1Q9Y6X0 1596 aa22.25■■□□□ 1.15
PDGFB-202ENST00000381551 PIK3C2GO75747 1445 aa22.24■■□□□ 1.15
PDGFB-202ENST00000381551 NRXN3Q9Y4C0 1643 aa22.23■■□□□ 1.15
PDGFB-202ENST00000381551 CFAP70Q5T0N1 1121 aa22.22■■□□□ 1.15
PDGFB-202ENST00000381551 ALKQ9UM73 1620 aa22.2■■□□□ 1.14
PDGFB-202ENST00000381551 NBPF8Q3BBV2 869 aa22.19■■□□□ 1.14
PDGFB-202ENST00000381551 METP08581 1390 aa22.19■■□□□ 1.14
PDGFB-202ENST00000381551 PRAG1Q86YV5 1406 aa22.19■■□□□ 1.14
PDGFB-202ENST00000381551 DIP2AQ14689 1571 aa22.16■■□□□ 1.14
PDGFB-202ENST00000381551 PIK3R4Q99570 1358 aa22.16■■□□□ 1.14
PDGFB-202ENST00000381551 TMEM132EQ6IEE7 984 aa22.16■■□□□ 1.14
PDGFB-202ENST00000381551 KCNA6P17658 529 aa22.15■■□□□ 1.14
PDGFB-202ENST00000381551 ZNF335Q9H4Z2 1342 aaPredicted RBP22.14■■□□□ 1.14
PDGFB-202ENST00000381551 NBPF1Q3BBV0 1214 aa22.13■■□□□ 1.13
PDGFB-202ENST00000381551 AMOTL2Q9Y2J4 779 aa22.13■■□□□ 1.13
PDGFB-202ENST00000381551 SETD1AO15047 1707 aaKnown RBP22.13■■□□□ 1.13
PDGFB-202ENST00000381551 PTPRUQ92729 1446 aa22.12■■□□□ 1.13
PDGFB-202ENST00000381551 CHD2O14647 1828 aaKnown RBP22.09■■□□□ 1.13
PDGFB-202ENST00000381551 LAMC1P11047 1609 aa22.09■■□□□ 1.13
PDGFB-202ENST00000381551 KIAA1210Q9ULL0 1709 aa22.09■■□□□ 1.13
PDGFB-202ENST00000381551 ASXL1Q8IXJ9 1541 aa22.07■■□□□ 1.12
PDGFB-202ENST00000381551 STK26Q9P289 416 aa22.07■■□□□ 1.12
PDGFB-202ENST00000381551 ADGRB1O14514 1584 aa22.07■■□□□ 1.12
PDGFB-202ENST00000381551 LRPPRCP42704 1394 aaKnown RBP22.06■■□□□ 1.12
PDGFB-202ENST00000381551 ABCC11Q96J66 1382 aa22.06■■□□□ 1.12
PDGFB-202ENST00000381551 YTHDC2Q9H6S0 1430 aaKnown RBP22.06■■□□□ 1.12
PDGFB-202ENST00000381551 STRCP1A6NGW2 1772 aa22.05■■□□□ 1.12
PDGFB-202ENST00000381551 TRPM1Q7Z4N2 1603 aa22.04■■□□□ 1.12
PDGFB-202ENST00000381551 LTBP4Q8N2S1 1624 aa22.04■■□□□ 1.12
PDGFB-202ENST00000381551 NWD1Q149M9 1564 aa22.04■■□□□ 1.12
PDGFB-202ENST00000381551 PROSER2Q86WR7 435 aaPredicted RBP22.03■■□□□ 1.12
PDGFB-202ENST00000381551 SIRT1Q96EB6 747 aa22.03■■□□□ 1.12
PDGFB-202ENST00000381551 ROCK2O75116 1388 aaKnown RBP22.02■■□□□ 1.12
PDGFB-202ENST00000381551 TRAK1Q9UPV9 953 aa22.02■■□□□ 1.12
PDGFB-202ENST00000381551 XRN1Q8IZH2 1706 aaKnown RBP22.01■■□□□ 1.11
PDGFB-202ENST00000381551 RALGAPBQ86X10 1494 aa22.01■■□□□ 1.11
PDGFB-202ENST00000381551 CPS1P31327 1500 aa22.01■■□□□ 1.11
PDGFB-202ENST00000381551 GPRASP1Q5JY77 1395 aa22■■□□□ 1.11
PDGFB-202ENST00000381551 ROBO2Q9HCK4 1378 aa22■■□□□ 1.11
PDGFB-202ENST00000381551 TECPR2O15040 1411 aa22■■□□□ 1.11
PDGFB-202ENST00000381551 NKTRP30414 1462 aaKnown RBP21.99■■□□□ 1.11
PDGFB-202ENST00000381551 RBM33Q96EV2 1170 aaKnown RBP21.99■■□□□ 1.11
PDGFB-202ENST00000381551 CARD11Q9BXL7 1154 aa21.99■■□□□ 1.11
PDGFB-202ENST00000381551 LRRC7Q96NW7 1537 aa21.98■■□□□ 1.11
PDGFB-202ENST00000381551 WAPLQ7Z5K2 1190 aa21.97■■□□□ 1.11
PDGFB-202ENST00000381551 PTCH1Q13635 1447 aa21.97■■□□□ 1.11
PDGFB-202ENST00000381551 TMEM94Q12767 1356 aa21.96■■□□□ 1.11
PDGFB-202ENST00000381551 PRAM1Q96QH2 718 aa21.95■■□□□ 1.1
PDGFB-202ENST00000381551 FAM135BQ49AJ0 1406 aa21.95■■□□□ 1.1
PDGFB-202ENST00000381551 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
PDGFB-202ENST00000381551 DLC1Q96QB1 1528 aa21.94■■□□□ 1.1
PDGFB-202ENST00000381551 KNDC1Q76NI1 1749 aa21.93■■□□□ 1.1
PDGFB-202ENST00000381551 CERKQ8TCT0 537 aa21.93■■□□□ 1.1
PDGFB-202ENST00000381551 POGKQ9P215 609 aa21.93■■□□□ 1.1
PDGFB-202ENST00000381551 PLEKHH1Q9ULM0 1364 aa21.93■■□□□ 1.1
PDGFB-202ENST00000381551 NCOA3Q9Y6Q9 1424 aa21.93■■□□□ 1.1
PDGFB-202ENST00000381551 SAFB2Q14151 953 aaKnown RBP eCLIP21.89■■□□□ 1.09
PDGFB-202ENST00000381551 C14orf37Q86TY3 774 aa21.89■■□□□ 1.09
PDGFB-202ENST00000381551 C19orf44Q9H6X5 657 aa21.89■■□□□ 1.09
PDGFB-202ENST00000381551 XIRP1Q702N8 1843 aaKnown RBP21.88■■□□□ 1.09
PDGFB-202ENST00000381551 ARHGEF28Q8N1W1 1705 aaKnown RBP21.86■■□□□ 1.09
PDGFB-202ENST00000381551 CENPJQ9HC77 1338 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms