RNA–Protein interactions for RNA: ENST00000381322.5

CLOCK-202, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 4,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-202ENST00000381322 CABP1Q9NZU7 370 aa11.47□□□□□ -0.57
CLOCK-202ENST00000381322 CDK19Q9BWU1 502 aa11.47□□□□□ -0.57
CLOCK-202ENST00000381322 EVC2Q86UK5 1308 aa11.47□□□□□ -0.57
CLOCK-202ENST00000381322 TTC37Q6PGP7 1564 aa11.46□□□□□ -0.57
CLOCK-202ENST00000381322 SAMD9Q5K651 1589 aa11.46□□□□□ -0.58
CLOCK-202ENST00000381322 ORAI2Q96SN7 254 aa11.45□□□□□ -0.58
CLOCK-202ENST00000381322 GPRASP1Q5JY77 1395 aa11.45□□□□□ -0.58
CLOCK-202ENST00000381322 C19orf44Q9H6X5 657 aa11.45□□□□□ -0.58
CLOCK-202ENST00000381322 LAS1LQ9Y4W2 734 aaKnown RBP11.45□□□□□ -0.58
CLOCK-202ENST00000381322 SLAIN2Q9P270 581 aa11.45□□□□□ -0.58
CLOCK-202ENST00000381322 NAIPQ13075 1403 aa11.45□□□□□ -0.58
CLOCK-202ENST00000381322 PTPN23Q9H3S7 1636 aa11.44□□□□□ -0.58
CLOCK-202ENST00000381322 SF3B2Q13435 895 aaKnown RBP11.44□□□□□ -0.58
CLOCK-202ENST00000381322 CHRNA2Q15822 529 aa11.44□□□□□ -0.58
CLOCK-202ENST00000381322 GGNBP2Q9H3C7 697 aa11.44□□□□□ -0.58
CLOCK-202ENST00000381322 MAPKBP1O60336 1514 aa11.44□□□□□ -0.58
CLOCK-202ENST00000381322 CNTLNQ9NXG0 1405 aa11.44□□□□□ -0.58
CLOCK-202ENST00000381322 SLC12A5Q9H2X9 1139 aa11.44□□□□□ -0.58
CLOCK-202ENST00000381322 PHF8Q9UPP1 1060 aa11.43□□□□□ -0.58
CLOCK-202ENST00000381322 ATP7AQ04656 1500 aa11.43□□□□□ -0.58
CLOCK-202ENST00000381322 ARHGEF12Q9NZN5 1544 aa11.43□□□□□ -0.58
CLOCK-202ENST00000381322 WDR43Q15061 677 aaKnown RBP eCLIP11.43□□□□□ -0.58
CLOCK-202ENST00000381322 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
CLOCK-202ENST00000381322 KRT28Q7Z3Y7 464 aa11.42□□□□□ -0.58
CLOCK-202ENST00000381322 DISP3Q9P2K9 1392 aa11.42□□□□□ -0.58
CLOCK-202ENST00000381322 DIEXFQ68CQ4 756 aaKnown RBP11.42□□□□□ -0.58
CLOCK-202ENST00000381322 COG3Q96JB2 828 aa11.42□□□□□ -0.58
CLOCK-202ENST00000381322 NOS1P29475 1434 aa11.42□□□□□ -0.58
CLOCK-202ENST00000381322 RIMS2Q9UQ26 1411 aa11.42□□□□□ -0.58
CLOCK-202ENST00000381322 TOM1L2Q6ZVM7 507 aa11.41□□□□□ -0.58
CLOCK-202ENST00000381322 NUDT16Q96DE0 195 aaKnown RBP11.41□□□□□ -0.58
CLOCK-202ENST00000381322 DIP2BQ9P265 1576 aa11.41□□□□□ -0.58
CLOCK-202ENST00000381322 PPP1R1BQ9UD71 204 aaPredicted RBP11.41□□□□□ -0.58
CLOCK-202ENST00000381322 CFAP53Q96M91 514 aa11.4□□□□□ -0.58
CLOCK-202ENST00000381322 DDX54Q8TDD1 881 aaKnown RBP11.4□□□□□ -0.59
CLOCK-202ENST00000381322 RRBP1Q9P2E9 1410 aaKnown RBP11.39□□□□□ -0.59
CLOCK-202ENST00000381322 TMEM94Q12767 1356 aa11.38□□□□□ -0.59
CLOCK-202ENST00000381322 NBPF8Q3BBV2 869 aa11.38□□□□□ -0.59
CLOCK-202ENST00000381322 EIF3AQ14152 1382 aaKnown RBP11.38□□□□□ -0.59
CLOCK-202ENST00000381322 PTPRMP28827 1452 aa11.38□□□□□ -0.59
CLOCK-202ENST00000381322 RPGRIP1LQ68CZ1 1315 aa11.38□□□□□ -0.59
CLOCK-202ENST00000381322 HFM1A2PYH4 1435 aa11.38□□□□□ -0.59
CLOCK-202ENST00000381322 PDE3BQ13370 1112 aa11.38□□□□□ -0.59
CLOCK-202ENST00000381322 TBX22Q9Y458 520 aa11.38□□□□□ -0.59
CLOCK-202ENST00000381322 CCDC61Q9Y6R9 512 aa11.38□□□□□ -0.59
CLOCK-202ENST00000381322 ROCK1Q13464 1354 aa11.38□□□□□ -0.59
CLOCK-202ENST00000381322 RTEL1-TNFRSF6BF6WH68 1400 aa11.37□□□□□ -0.59
CLOCK-202ENST00000381322 PANK3Q9H999 370 aa11.37□□□□□ -0.59
CLOCK-202ENST00000381322 MRS2Q9HD23 443 aa11.37□□□□□ -0.59
CLOCK-202ENST00000381322 SHROOM2Q13796 1616 aa11.36□□□□□ -0.59
CLOCK-202ENST00000381322 MBD5Q9P267 1494 aa11.36□□□□□ -0.59
CLOCK-202ENST00000381322 NLRP13Q86W25 1043 aa11.36□□□□□ -0.59
CLOCK-202ENST00000381322 HSPA1LP34931 641 aa11.36□□□□□ -0.59
CLOCK-202ENST00000381322 ILDR1Q86SU0 546 aaPredicted RBP11.36□□□□□ -0.59
CLOCK-202ENST00000381322 MAGI2Q86UL8 1455 aa11.36□□□□□ -0.59
CLOCK-202ENST00000381322 ANKRD30BQ9BXX2 1392 aa11.35□□□□□ -0.59
CLOCK-202ENST00000381322 TMEM2Q9UHN6 1383 aa11.35□□□□□ -0.59
CLOCK-202ENST00000381322 U2AF1L5P0DN76 240 aaPredicted RBP11.35□□□□□ -0.59
CLOCK-202ENST00000381322 U2AF1Q01081 240 aaKnown RBP eCLIP11.35□□□□□ -0.59
CLOCK-202ENST00000381322 MLH3Q9UHC1 1453 aa11.35□□□□□ -0.59
CLOCK-202ENST00000381322 LRRC59Q96AG4 307 aaKnown RBP11.35□□□□□ -0.59
CLOCK-202ENST00000381322 NUDCQ9Y266 331 aa11.35□□□□□ -0.59
CLOCK-202ENST00000381322 DUOX2Q9NRD8 1548 aa11.34□□□□□ -0.59
CLOCK-202ENST00000381322 FBLN1P23142 703 aa11.34□□□□□ -0.59
CLOCK-202ENST00000381322 NPATQ14207 1427 aa11.34□□□□□ -0.59
CLOCK-202ENST00000381322 WASLO00401 505 aaPredicted RBP11.33□□□□□ -0.6
CLOCK-202ENST00000381322 MAPK8IP3Q9UPT6 1336 aa11.32□□□□□ -0.6
CLOCK-202ENST00000381322 CANXP27824 592 aaKnown RBP11.32□□□□□ -0.6
CLOCK-202ENST00000381322 RRS1Q15050 365 aaKnown RBP11.32□□□□□ -0.6
CLOCK-202ENST00000381322 RAPGEF4Q8WZA2 1011 aa11.32□□□□□ -0.6
CLOCK-202ENST00000381322 NPHP4O75161 1426 aaPredicted RBP11.31□□□□□ -0.6
CLOCK-202ENST00000381322 NPHP3Q7Z494 1330 aa11.31□□□□□ -0.6
CLOCK-202ENST00000381322 C14orf93Q9H972 538 aaKnown RBP11.31□□□□□ -0.6
CLOCK-202ENST00000381322 MYO5CQ9NQX4 1742 aa11.3□□□□□ -0.6
CLOCK-202ENST00000381322 USP47Q96K76 1375 aa11.3□□□□□ -0.6
CLOCK-202ENST00000381322 SAMD9LQ8IVG5 1584 aa11.3□□□□□ -0.6
CLOCK-202ENST00000381322 ARAP3Q8WWN8 1544 aa11.3□□□□□ -0.6
CLOCK-202ENST00000381322 PELP1Q8IZL8 1130 aaKnown RBP11.29□□□□□ -0.6
CLOCK-202ENST00000381322 KAT6BQ8WYB5 2073 aa11.29□□□□□ -0.6
CLOCK-202ENST00000381322 FAM182BQ5T319 152 aa11.29□□□□□ -0.6
CLOCK-202ENST00000381322 RTF1Q92541 710 aaKnown RBP11.29□□□□□ -0.6
CLOCK-202ENST00000381322 HMOX1P09601 288 aa11.29□□□□□ -0.6
CLOCK-202ENST00000381322 NME9Q86XW9 330 aa11.28□□□□□ -0.6
CLOCK-202ENST00000381322 ABCC1P33527 1531 aa11.28□□□□□ -0.6
CLOCK-202ENST00000381322 NGEFQ8N5V2 710 aa11.28□□□□□ -0.6
CLOCK-202ENST00000381322 ACEP12821 1306 aa11.28□□□□□ -0.6
CLOCK-202ENST00000381322 MAP3K1Q13233 1512 aa11.28□□□□□ -0.6
CLOCK-202ENST00000381322 USHBP1Q8N6Y0 703 aa11.27□□□□□ -0.6
CLOCK-202ENST00000381322 STAC3Q96MF2 364 aa11.27□□□□□ -0.6
CLOCK-202ENST00000381322 UGGT1Q9NYU2 1555 aa11.27□□□□□ -0.61
CLOCK-202ENST00000381322 USP21Q9UK80 565 aa11.27□□□□□ -0.61
CLOCK-202ENST00000381322 BTG4Q9NY30 223 aa11.26□□□□□ -0.61
CLOCK-202ENST00000381322 ITSN2Q9NZM3 1697 aa11.26□□□□□ -0.61
CLOCK-202ENST00000381322 QTRT2Q9H974 415 aaKnown RBP11.25□□□□□ -0.61
CLOCK-202ENST00000381322 WWC3Q9ULE0 1092 aa11.25□□□□□ -0.61
CLOCK-202ENST00000381322 HECW2Q9P2P5 1572 aa11.25□□□□□ -0.61
CLOCK-202ENST00000381322 CGNL1Q0VF96 1302 aa11.25□□□□□ -0.61
CLOCK-202ENST00000381322 ZRANB1Q9UGI0 708 aa11.25□□□□□ -0.61
CLOCK-202ENST00000381322 TIMELESSQ9UNS1 1208 aa11.25□□□□□ -0.61
CLOCK-202ENST00000381322 FAM98CQ17RN3 349 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms