RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 DDX10Q13206 875 aaKnown RBP11.25□□□□□ -0.61
ERCC8-202ENST00000381118 TMEM131LA2VDJ0 1609 aa11.24□□□□□ -0.61
ERCC8-202ENST00000381118 STAG3Q9UJ98 1225 aa11.24□□□□□ -0.61
ERCC8-202ENST00000381118 CEBPAP49715 358 aaPredicted RBP11.24□□□□□ -0.61
ERCC8-202ENST00000381118 MYOM2P54296 1465 aa11.23□□□□□ -0.61
ERCC8-202ENST00000381118 C3P01024 1663 aa11.23□□□□□ -0.61
ERCC8-202ENST00000381118 NEXMIFQ5QGS0 1516 aa11.22□□□□□ -0.61
ERCC8-202ENST00000381118 POLR1AO95602 1720 aaPredicted RBP11.22□□□□□ -0.61
ERCC8-202ENST00000381118 ST20-MTHFSA0A0A6YYL1 179 aa11.21□□□□□ -0.61
ERCC8-202ENST00000381118 C11orf95C9JLR9 678 aaPredicted RBP11.21□□□□□ -0.61
ERCC8-202ENST00000381118 STAC3Q96MF2 364 aa11.21□□□□□ -0.61
ERCC8-202ENST00000381118 WASHC2AQ641Q2 1341 aa11.21□□□□□ -0.61
ERCC8-202ENST00000381118 LAMC1P11047 1609 aa11.21□□□□□ -0.62
ERCC8-202ENST00000381118 CFAP70Q5T0N1 1121 aa11.21□□□□□ -0.62
ERCC8-202ENST00000381118 KIAA1210Q9ULL0 1709 aa11.2□□□□□ -0.62
ERCC8-202ENST00000381118 RIMS1Q86UR5 1692 aaKnown RBP11.2□□□□□ -0.62
ERCC8-202ENST00000381118 GPRASP1Q5JY77 1395 aa11.2□□□□□ -0.62
ERCC8-202ENST00000381118 RPGRIP1LQ68CZ1 1315 aa11.2□□□□□ -0.62
ERCC8-202ENST00000381118 POLR3GLQ9BT43 218 aa11.2□□□□□ -0.62
ERCC8-202ENST00000381118 MIER1Q8N108 512 aa11.19□□□□□ -0.62
ERCC8-202ENST00000381118 TNRQ92752 1358 aa11.19□□□□□ -0.62
ERCC8-202ENST00000381118 NRXN1Q9ULB1 1477 aa11.19□□□□□ -0.62
ERCC8-202ENST00000381118 IQGAP1P46940 1657 aa11.19□□□□□ -0.62
ERCC8-202ENST00000381118 PIK3C2GO75747 1445 aa11.18□□□□□ -0.62
ERCC8-202ENST00000381118 VGFO15240 615 aaPredicted RBP11.18□□□□□ -0.62
ERCC8-202ENST00000381118 A2ML1A8K2U0 1454 aa11.17□□□□□ -0.62
ERCC8-202ENST00000381118 CCDC7Q96M83 1385 aa11.17□□□□□ -0.62
ERCC8-202ENST00000381118 KIF7Q2M1P5 1343 aa11.17□□□□□ -0.62
ERCC8-202ENST00000381118 UBR1Q8IWV7 1749 aa11.16□□□□□ -0.62
ERCC8-202ENST00000381118 TMEM132EQ6IEE7 984 aa11.16□□□□□ -0.62
ERCC8-202ENST00000381118 SCAF11Q99590 1463 aaKnown RBP11.15□□□□□ -0.62
ERCC8-202ENST00000381118 ADAMTSL3P82987 1691 aa11.14□□□□□ -0.63
ERCC8-202ENST00000381118 C14orf93Q9H972 538 aaKnown RBP11.14□□□□□ -0.63
ERCC8-202ENST00000381118 RIMS2Q9UQ26 1411 aa11.14□□□□□ -0.63
ERCC8-202ENST00000381118 SETBP1Q9Y6X0 1596 aa11.13□□□□□ -0.63
ERCC8-202ENST00000381118 MYO3AQ8NEV4 1616 aa11.12□□□□□ -0.63
ERCC8-202ENST00000381118 TRAK1Q9UPV9 953 aa11.12□□□□□ -0.63
ERCC8-202ENST00000381118 ZFYVE9O95405 1425 aa11.12□□□□□ -0.63
ERCC8-202ENST00000381118 NLRP1Q9C000 1473 aa11.12□□□□□ -0.63
ERCC8-202ENST00000381118 ADGRB1O14514 1584 aa11.12□□□□□ -0.63
ERCC8-202ENST00000381118 KDM5AP29375 1690 aaKnown RBP11.12□□□□□ -0.63
ERCC8-202ENST00000381118 TESK2Q96S53 571 aa11.12□□□□□ -0.63
ERCC8-202ENST00000381118 EIF3AQ14152 1382 aaKnown RBP11.12□□□□□ -0.63
ERCC8-202ENST00000381118 DISP3Q9P2K9 1392 aa11.11□□□□□ -0.63
ERCC8-202ENST00000381118 ALKQ9UM73 1620 aa11.1□□□□□ -0.63
ERCC8-202ENST00000381118 BCANQ96GW7 911 aa11.09□□□□□ -0.63
ERCC8-202ENST00000381118 ASXL1Q8IXJ9 1541 aa11.09□□□□□ -0.63
ERCC8-202ENST00000381118 TMEM2Q9UHN6 1383 aa11.09□□□□□ -0.63
ERCC8-202ENST00000381118 ARHGEF28Q8N1W1 1705 aaKnown RBP11.09□□□□□ -0.63
ERCC8-202ENST00000381118 TMF1P82094 1093 aa11.09□□□□□ -0.63
ERCC8-202ENST00000381118 STK26Q9P289 416 aa11.09□□□□□ -0.63
ERCC8-202ENST00000381118 QRICH2Q9H0J4 1663 aa11.09□□□□□ -0.63
ERCC8-202ENST00000381118 ANP32CO43423 234 aa11.08□□□□□ -0.64
ERCC8-202ENST00000381118 NRXN3Q9Y4C0 1643 aa11.08□□□□□ -0.64
ERCC8-202ENST00000381118 CNGB1Q14028 1251 aaPredicted RBP11.08□□□□□ -0.64
ERCC8-202ENST00000381118 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.08□□□□□ -0.64
ERCC8-202ENST00000381118 SETD1AO15047 1707 aaKnown RBP11.08□□□□□ -0.64
ERCC8-202ENST00000381118 CEP170BQ9Y4F5 1589 aaPredicted RBP11.07□□□□□ -0.64
ERCC8-202ENST00000381118 HDGFP51858 240 aaKnown RBP11.07□□□□□ -0.64
ERCC8-202ENST00000381118 SAFB2Q14151 953 aaKnown RBP eCLIP11.07□□□□□ -0.644e-6■■■■□ 19.5
ERCC8-202ENST00000381118 SETD1BQ9UPS6 1966 aaKnown RBP11.06□□□□□ -0.64
ERCC8-202ENST00000381118 CENPJQ9HC77 1338 aaPredicted RBP11.06□□□□□ -0.64
ERCC8-202ENST00000381118 PTPRMP28827 1452 aa11.06□□□□□ -0.64
ERCC8-202ENST00000381118 LTKP29376 864 aa11.06□□□□□ -0.64
ERCC8-202ENST00000381118 TXNDC2Q86VQ3 553 aa11.05□□□□□ -0.64
ERCC8-202ENST00000381118 YTHDC2Q9H6S0 1430 aaKnown RBP11.05□□□□□ -0.64
ERCC8-202ENST00000381118 THEMISQ8N1K5 641 aaPredicted RBP11.04□□□□□ -0.64
ERCC8-202ENST00000381118 YTHDC1Q96MU7 727 aaKnown RBP11.04□□□□□ -0.64
ERCC8-202ENST00000381118 EID1Q9Y6B2 187 aa11.04□□□□□ -0.64
ERCC8-202ENST00000381118 SLIT1O75093 1534 aa11.03□□□□□ -0.64
ERCC8-202ENST00000381118 ZNF142P52746 1687 aaPredicted RBP11.03□□□□□ -0.64
ERCC8-202ENST00000381118 METP08581 1390 aa11.03□□□□□ -0.64
ERCC8-202ENST00000381118 ARHGAP23Q9P227 1491 aa11.02□□□□□ -0.65
ERCC8-202ENST00000381118 PRAM1Q96QH2 718 aa11.02□□□□□ -0.65
ERCC8-202ENST00000381118 MYOM1P52179 1685 aa11.02□□□□□ -0.65
ERCC8-202ENST00000381118 CDCA8Q53HL2 280 aa11.01□□□□□ -0.65
ERCC8-202ENST00000381118 SLC26A8Q96RN1 970 aa11.01□□□□□ -0.65
ERCC8-202ENST00000381118 POGKQ9P215 609 aa11.01□□□□□ -0.65
ERCC8-202ENST00000381118 PLEKHG1Q9ULL1 1385 aa11.01□□□□□ -0.65
ERCC8-202ENST00000381118 SBNO2Q9Y2G9 1366 aa11□□□□□ -0.65
ERCC8-202ENST00000381118 ADAMTS13Q76LX8 1427 aa11□□□□□ -0.65
ERCC8-202ENST00000381118 PANK3Q9H999 370 aa11□□□□□ -0.65
ERCC8-202ENST00000381118 MINK1Q8N4C8 1332 aaPredicted RBP11□□□□□ -0.65
ERCC8-202ENST00000381118 WAPLQ7Z5K2 1190 aa10.99□□□□□ -0.65
ERCC8-202ENST00000381118 PRKRIP1Q9H875 184 aaPredicted RBP10.99□□□□□ -0.65
ERCC8-202ENST00000381118 TULP4Q9NRJ4 1543 aa10.99□□□□□ -0.65
ERCC8-202ENST00000381118 SLC24A1O60721 1099 aa10.99□□□□□ -0.65
ERCC8-202ENST00000381118 LRPPRCP42704 1394 aaKnown RBP10.98□□□□□ -0.65
ERCC8-202ENST00000381118 PLEKHH1Q9ULM0 1364 aa10.98□□□□□ -0.65
ERCC8-202ENST00000381118 KNDC1Q76NI1 1749 aa10.97□□□□□ -0.65
ERCC8-202ENST00000381118 TMC1Q8TDI8 760 aa10.97□□□□□ -0.65
ERCC8-202ENST00000381118 CABP2Q9NPB3 220 aa10.97□□□□□ -0.65
ERCC8-202ENST00000381118 EVC2Q86UK5 1308 aa10.97□□□□□ -0.65
ERCC8-202ENST00000381118 ABCC11Q96J66 1382 aa10.96□□□□□ -0.65
ERCC8-202ENST00000381118 DLC1Q96QB1 1528 aa10.96□□□□□ -0.65
ERCC8-202ENST00000381118 SRPK2P78362 688 aaKnown RBP10.96□□□□□ -0.66
ERCC8-202ENST00000381118 ANKLE2Q86XL3 938 aa10.96□□□□□ -0.66
ERCC8-202ENST00000381118 CCER2I3L3R5 266 aa10.95□□□□□ -0.66
ERCC8-202ENST00000381118 MED14O60244 1454 aa10.95□□□□□ -0.66
ERCC8-202ENST00000381118 KDM4FA0A1W2PPD8 638 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms