RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 EID1Q9Y6B2 187 aa21.95■■□□□ 1.1
VCX3B-201ENST00000381029 ZNF335Q9H4Z2 1342 aaPredicted RBP21.94■■□□□ 1.1
VCX3B-201ENST00000381029 ANKRD30BQ9BXX2 1392 aa21.94■■□□□ 1.1
VCX3B-201ENST00000381029 CHGAP10645 457 aaKnown RBP21.93■■□□□ 1.1
VCX3B-201ENST00000381029 SPATA31E1Q6ZUB1 1445 aa21.93■■□□□ 1.1
VCX3B-201ENST00000381029 PLEKHG1Q9ULL1 1385 aa21.92■■□□□ 1.1
VCX3B-201ENST00000381029 NEXMIFQ5QGS0 1516 aa21.91■■□□□ 1.1
VCX3B-201ENST00000381029 CCDC144AA2RUR9 1427 aa21.91■■□□□ 1.1
VCX3B-201ENST00000381029 KIF1BO60333 1816 aa21.9■■□□□ 1.1
VCX3B-201ENST00000381029 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.89■■□□□ 1.09
VCX3B-201ENST00000381029 ADAMTS13Q76LX8 1427 aa21.88■■□□□ 1.09
VCX3B-201ENST00000381029 HDGFP51858 240 aaKnown RBP21.86■■□□□ 1.09
VCX3B-201ENST00000381029 STRCP1A6NGW2 1772 aa21.85■■□□□ 1.09
VCX3B-201ENST00000381029 NUTM2DQ5VT03 806 aaPredicted RBP21.85■■□□□ 1.09
VCX3B-201ENST00000381029 CERKQ8TCT0 537 aa21.85■■□□□ 1.09
VCX3B-201ENST00000381029 NRXN3Q9Y4C0 1643 aa21.84■■□□□ 1.09
VCX3B-201ENST00000381029 RPGRIP1LQ68CZ1 1315 aa21.83■■□□□ 1.09
VCX3B-201ENST00000381029 SETBP1Q9Y6X0 1596 aa21.83■■□□□ 1.09
VCX3B-201ENST00000381029 SLC26A8Q96RN1 970 aa21.83■■□□□ 1.09
VCX3B-201ENST00000381029 ZNF326Q5BKZ1 582 aaKnown RBP21.82■■□□□ 1.08
VCX3B-201ENST00000381029 TBX22Q9Y458 520 aa21.81■■□□□ 1.08
VCX3B-201ENST00000381029 CPS1P31327 1500 aa21.8■■□□□ 1.08
VCX3B-201ENST00000381029 PPP1R15AO75807 674 aaPredicted RBP21.8■■□□□ 1.08
VCX3B-201ENST00000381029 PPLO60437 1756 aa21.79■■□□□ 1.08
VCX3B-201ENST00000381029 IQSEC2Q5JU85 1478 aa21.79■■□□□ 1.08
VCX3B-201ENST00000381029 DIP2AQ14689 1571 aa21.78■■□□□ 1.08
VCX3B-201ENST00000381029 NWD1Q149M9 1564 aa21.78■■□□□ 1.08
VCX3B-201ENST00000381029 IFT172Q9UG01 1749 aa21.78■■□□□ 1.08
VCX3B-201ENST00000381029 DHX57Q6P158 1386 aaKnown RBP21.77■■□□□ 1.08
VCX3B-201ENST00000381029 LRRC7Q96NW7 1537 aa21.75■■□□□ 1.07
VCX3B-201ENST00000381029 VGFO15240 615 aaPredicted RBP21.75■■□□□ 1.07
VCX3B-201ENST00000381029 KCNA6P17658 529 aa21.75■■□□□ 1.07
VCX3B-201ENST00000381029 RGL3Q3MIN7 710 aa21.75■■□□□ 1.07
VCX3B-201ENST00000381029 SENP3Q9H4L4 574 aaPredicted RBP21.75■■□□□ 1.07
VCX3B-201ENST00000381029 PIK3R4Q99570 1358 aa21.74■■□□□ 1.07
VCX3B-201ENST00000381029 ADGRF5Q8IZF2 1346 aa21.74■■□□□ 1.07
VCX3B-201ENST00000381029 PTPRUQ92729 1446 aa21.73■■□□□ 1.07
VCX3B-201ENST00000381029 NRXN1Q9ULB1 1477 aa21.73■■□□□ 1.07
VCX3B-201ENST00000381029 SETD1AO15047 1707 aaKnown RBP21.73■■□□□ 1.07
VCX3B-201ENST00000381029 CHD2O14647 1828 aaKnown RBP21.72■■□□□ 1.07
VCX3B-201ENST00000381029 METP08581 1390 aa21.72■■□□□ 1.07
VCX3B-201ENST00000381029 NKTRP30414 1462 aaKnown RBP21.71■■□□□ 1.07
VCX3B-201ENST00000381029 MYOM2P54296 1465 aa21.71■■□□□ 1.07
VCX3B-201ENST00000381029 PIK3C2GO75747 1445 aa21.7■■□□□ 1.06
VCX3B-201ENST00000381029 ALKQ9UM73 1620 aa21.69■■□□□ 1.06
VCX3B-201ENST00000381029 BCANQ96GW7 911 aa21.69■■□□□ 1.06
VCX3B-201ENST00000381029 XIRP1Q702N8 1843 aaKnown RBP21.66■■□□□ 1.06
VCX3B-201ENST00000381029 XRN1Q8IZH2 1706 aaKnown RBP21.66■■□□□ 1.06
VCX3B-201ENST00000381029 PRAG1Q86YV5 1406 aa21.65■■□□□ 1.06
VCX3B-201ENST00000381029 PCGF6Q9BYE7 350 aa21.64■■□□□ 1.05
VCX3B-201ENST00000381029 ASXL1Q8IXJ9 1541 aa21.64■■□□□ 1.05
VCX3B-201ENST00000381029 TMEM94Q12767 1356 aa21.63■■□□□ 1.05
VCX3B-201ENST00000381029 SIN3AQ96ST3 1273 aa21.62■■□□□ 1.05
VCX3B-201ENST00000381029 AMOTL2Q9Y2J4 779 aa21.62■■□□□ 1.05
VCX3B-201ENST00000381029 C14orf93Q9H972 538 aaKnown RBP21.6■■□□□ 1.05
VCX3B-201ENST00000381029 PROSER2Q86WR7 435 aaPredicted RBP21.59■■□□□ 1.05
VCX3B-201ENST00000381029 STAC3Q96MF2 364 aa21.59■■□□□ 1.05
VCX3B-201ENST00000381029 NCOA3Q9Y6Q9 1424 aa21.59■■□□□ 1.05
VCX3B-201ENST00000381029 RBM33Q96EV2 1170 aaKnown RBP21.58■■□□□ 1.05
VCX3B-201ENST00000381029 DCAF11Q8TEB1 546 aa21.57■■□□□ 1.04
VCX3B-201ENST00000381029 TECPR2O15040 1411 aa21.55■■□□□ 1.04
VCX3B-201ENST00000381029 PTCH1Q13635 1447 aa21.55■■□□□ 1.04
VCX3B-201ENST00000381029 ROBO2Q9HCK4 1378 aa21.54■■□□□ 1.04
VCX3B-201ENST00000381029 CFAP70Q5T0N1 1121 aa21.54■■□□□ 1.04
VCX3B-201ENST00000381029 ADGRB1O14514 1584 aa21.53■■□□□ 1.04
VCX3B-201ENST00000381029 LAMC1P11047 1609 aa21.52■■□□□ 1.04
VCX3B-201ENST00000381029 LRPPRCP42704 1394 aaKnown RBP21.52■■□□□ 1.04
VCX3B-201ENST00000381029 ABCC11Q96J66 1382 aa21.52■■□□□ 1.04
VCX3B-201ENST00000381029 UBAP1LF5GYI3 381 aa21.52■■□□□ 1.04
VCX3B-201ENST00000381029 TMEM132EQ6IEE7 984 aa21.52■■□□□ 1.04
VCX3B-201ENST00000381029 L3MBTL2Q969R5 705 aa21.52■■□□□ 1.04
VCX3B-201ENST00000381029 KDM2AQ9Y2K7 1162 aa21.51■■□□□ 1.03
VCX3B-201ENST00000381029 YTHDC2Q9H6S0 1430 aaKnown RBP21.49■■□□□ 1.03
VCX3B-201ENST00000381029 TOM1O60784 492 aa21.48■■□□□ 1.03
VCX3B-201ENST00000381029 KNDC1Q76NI1 1749 aa21.47■■□□□ 1.03
VCX3B-201ENST00000381029 NEUROD1Q13562 356 aa21.47■■□□□ 1.03
VCX3B-201ENST00000381029 ADGRL3Q9HAR2 1447 aa21.46■■□□□ 1.03
VCX3B-201ENST00000381029 ILDR2Q71H61 639 aa21.46■■□□□ 1.03
VCX3B-201ENST00000381029 MSH6P52701 1360 aa21.46■■□□□ 1.03
VCX3B-201ENST00000381029 C19orf44Q9H6X5 657 aa21.45■■□□□ 1.02
VCX3B-201ENST00000381029 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.45■■□□□ 1.02
VCX3B-201ENST00000381029 DCCP43146 1447 aa21.45■■□□□ 1.02
VCX3B-201ENST00000381029 SIRT1Q96EB6 747 aa21.44■■□□□ 1.02
VCX3B-201ENST00000381029 NALCNQ8IZF0 1738 aa21.43■■□□□ 1.02
VCX3B-201ENST00000381029 PLEKHH1Q9ULM0 1364 aa21.43■■□□□ 1.02
VCX3B-201ENST00000381029 FAM135BQ49AJ0 1406 aa21.43■■□□□ 1.02
VCX3B-201ENST00000381029 KIAA1210Q9ULL0 1709 aa21.43■■□□□ 1.02
VCX3B-201ENST00000381029 DLC1Q96QB1 1528 aa21.42■■□□□ 1.02
VCX3B-201ENST00000381029 CLSPNQ9HAW4 1339 aa21.41■■□□□ 1.02
VCX3B-201ENST00000381029 STK26Q9P289 416 aa21.41■■□□□ 1.02
VCX3B-201ENST00000381029 NBPF1Q3BBV0 1214 aa21.39■■□□□ 1.01
VCX3B-201ENST00000381029 WAPLQ7Z5K2 1190 aa21.39■■□□□ 1.01
VCX3B-201ENST00000381029 DISP3Q9P2K9 1392 aa21.38■■□□□ 1.01
VCX3B-201ENST00000381029 PIP4K2BP78356 416 aa21.38■■□□□ 1.01
VCX3B-201ENST00000381029 MST1RQ04912 1400 aa21.38■■□□□ 1.01
VCX3B-201ENST00000381029 NBPF8Q3BBV2 869 aa21.37■■□□□ 1.01
VCX3B-201ENST00000381029 CADPS2Q86UW7 1296 aa21.37■■□□□ 1.01
VCX3B-201ENST00000381029 SLAIN2Q9P270 581 aa21.37■■□□□ 1.01
VCX3B-201ENST00000381029 C14orf37Q86TY3 774 aa21.35■■□□□ 1.01
VCX3B-201ENST00000381029 TRPM1Q7Z4N2 1603 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms