RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 NEURL4Q96JN8 1562 aa19.44■□□□□ 0.7
CLCN4-201ENST00000380829 TSPOAP1O95153 1857 aa19.44■□□□□ 0.7
CLCN4-201ENST00000380829 ADGRF5Q8IZF2 1346 aa19.42■□□□□ 0.7
CLCN4-201ENST00000380829 TMF1P82094 1093 aa19.41■□□□□ 0.7
CLCN4-201ENST00000380829 IQGAP1P46940 1657 aa19.41■□□□□ 0.7
CLCN4-201ENST00000380829 CAMSAP1Q5T5Y3 1602 aa19.4■□□□□ 0.7
CLCN4-201ENST00000380829 MYOM2P54296 1465 aa19.4■□□□□ 0.7
CLCN4-201ENST00000380829 CFAP70Q5T0N1 1121 aa19.4■□□□□ 0.7
CLCN4-201ENST00000380829 ERICH6Q7L0X2 663 aa19.4■□□□□ 0.7
CLCN4-201ENST00000380829 SCAF11Q99590 1463 aaKnown RBP19.39■□□□□ 0.7
CLCN4-201ENST00000380829 ADGRB3O60242 1522 aa19.39■□□□□ 0.69
CLCN4-201ENST00000380829 NEFLP07196 543 aa19.39■□□□□ 0.69
CLCN4-201ENST00000380829 IFT172Q9UG01 1749 aa19.37■□□□□ 0.69
CLCN4-201ENST00000380829 SIGLEC1Q9BZZ2 1709 aa19.37■□□□□ 0.69
CLCN4-201ENST00000380829 NOS1P29475 1434 aa19.37■□□□□ 0.69
CLCN4-201ENST00000380829 KIAA1210Q9ULL0 1709 aa19.35■□□□□ 0.69
CLCN4-201ENST00000380829 ZMYM4Q5VZL5 1548 aa19.35■□□□□ 0.69
CLCN4-201ENST00000380829 PER1O15534 1290 aaPredicted RBP19.34■□□□□ 0.69
CLCN4-201ENST00000380829 PANK3Q9H999 370 aa19.34■□□□□ 0.69
CLCN4-201ENST00000380829 NRXN1Q9ULB1 1477 aa19.32■□□□□ 0.68
CLCN4-201ENST00000380829 SYNMO15061 1565 aa19.32■□□□□ 0.68
CLCN4-201ENST00000380829 RALBP1Q15311 655 aa19.32■□□□□ 0.68
CLCN4-201ENST00000380829 TMC1Q8TDI8 760 aa19.32■□□□□ 0.68
CLCN4-201ENST00000380829 EIF3AQ14152 1382 aaKnown RBP19.32■□□□□ 0.68
CLCN4-201ENST00000380829 MYBBP1AQ9BQG0 1328 aaKnown RBP19.31■□□□□ 0.68
CLCN4-201ENST00000380829 KTN1Q86UP2 1357 aaKnown RBP19.31■□□□□ 0.68
CLCN4-201ENST00000380829 ZC3H13Q5T200 1668 aaKnown RBP19.3■□□□□ 0.68
CLCN4-201ENST00000380829 PPLO60437 1756 aa19.3■□□□□ 0.68
CLCN4-201ENST00000380829 ARHGAP31Q2M1Z3 1444 aa19.29■□□□□ 0.68
CLCN4-201ENST00000380829 CC2D1BQ5T0F9 858 aaKnown RBP19.29■□□□□ 0.68
CLCN4-201ENST00000380829 NUTM2DQ5VT03 806 aaPredicted RBP19.29■□□□□ 0.68
CLCN4-201ENST00000380829 PIK3C2BO00750 1634 aa19.28■□□□□ 0.68
CLCN4-201ENST00000380829 PARD3Q8TEW0 1356 aa19.28■□□□□ 0.68
CLCN4-201ENST00000380829 ZBED9Q6R2W3 1325 aa19.27■□□□□ 0.68
CLCN4-201ENST00000380829 PNISRQ8TF01 805 aaKnown RBP19.27■□□□□ 0.68
CLCN4-201ENST00000380829 PIK3C2GO75747 1445 aa19.27■□□□□ 0.68
CLCN4-201ENST00000380829 IDI1Q13907 227 aa19.26■□□□□ 0.67
CLCN4-201ENST00000380829 FANCIQ9NVI1 1328 aa19.26■□□□□ 0.67
CLCN4-201ENST00000380829 BRD4O60885 1362 aaPredicted RBP19.25■□□□□ 0.67
CLCN4-201ENST00000380829 RPGRIP1LQ68CZ1 1315 aa19.25■□□□□ 0.67
CLCN4-201ENST00000380829 CDCA8Q53HL2 280 aa19.25■□□□□ 0.67
CLCN4-201ENST00000380829 KIF13AQ9H1H9 1805 aa19.25■□□□□ 0.67
CLCN4-201ENST00000380829 SENP3-EIF4A1A0A087X0R7 540 aa19.24■□□□□ 0.67
CLCN4-201ENST00000380829 DEKP35659 375 aaKnown RBP19.23■□□□□ 0.67
CLCN4-201ENST00000380829 C14orf93Q9H972 538 aaKnown RBP19.23■□□□□ 0.67
CLCN4-201ENST00000380829 FBXO31Q5XUX0 539 aaPredicted RBP19.23■□□□□ 0.67
CLCN4-201ENST00000380829 TMEM132EQ6IEE7 984 aa19.23■□□□□ 0.67
CLCN4-201ENST00000380829 NLRP13Q86W25 1043 aa19.22■□□□□ 0.67
CLCN4-201ENST00000380829 TRAK1Q9UPV9 953 aa19.22■□□□□ 0.67
CLCN4-201ENST00000380829 PREX1Q8TCU6 1659 aa19.22■□□□□ 0.67
CLCN4-201ENST00000380829 SETBP1Q9Y6X0 1596 aa19.21■□□□□ 0.67
CLCN4-201ENST00000380829 SLC52A1Q9NWF4 448 aa19.21■□□□□ 0.67
CLCN4-201ENST00000380829 NEXMIFQ5QGS0 1516 aa19.21■□□□□ 0.67
CLCN4-201ENST00000380829 SENP3Q9H4L4 574 aaPredicted RBP19.21■□□□□ 0.67
CLCN4-201ENST00000380829 ERVK-7P63135 1459 aa19.21■□□□□ 0.67
CLCN4-201ENST00000380829 MLECQ14165 292 aa19.2■□□□□ 0.66
CLCN4-201ENST00000380829 ADGRB1O14514 1584 aa19.19■□□□□ 0.66
CLCN4-201ENST00000380829 VGFO15240 615 aaPredicted RBP19.19■□□□□ 0.66
CLCN4-201ENST00000380829 KNSTRNQ9Y448 316 aa19.19■□□□□ 0.66
CLCN4-201ENST00000380829 KDM5AP29375 1690 aaKnown RBP19.19■□□□□ 0.66
CLCN4-201ENST00000380829 REREQ9P2R6 1566 aa19.19■□□□□ 0.66
CLCN4-201ENST00000380829 MYOM1P52179 1685 aa19.19■□□□□ 0.66
CLCN4-201ENST00000380829 ANO8Q9HCE9 1232 aaPredicted RBP19.18■□□□□ 0.66
CLCN4-201ENST00000380829 CENPJQ9HC77 1338 aaPredicted RBP19.18■□□□□ 0.66
CLCN4-201ENST00000380829 LRPPRCP42704 1394 aaKnown RBP19.18■□□□□ 0.66
CLCN4-201ENST00000380829 AGLP35573 1532 aa19.17■□□□□ 0.66
CLCN4-201ENST00000380829 MYO3AQ8NEV4 1616 aa19.17■□□□□ 0.66
CLCN4-201ENST00000380829 IRX6P78412 446 aaPredicted RBP19.16■□□□□ 0.66
CLCN4-201ENST00000380829 MYO5BQ9ULV0 1848 aa19.16■□□□□ 0.66
CLCN4-201ENST00000380829 SLC24A1O60721 1099 aa19.14■□□□□ 0.66
CLCN4-201ENST00000380829 AMER1Q5JTC6 1135 aaPredicted RBP19.14■□□□□ 0.66
CLCN4-201ENST00000380829 CLTCQ00610 1675 aaKnown RBP19.14■□□□□ 0.65
CLCN4-201ENST00000380829 TMEM131LA2VDJ0 1609 aa19.14■□□□□ 0.65
CLCN4-201ENST00000380829 SBNO2Q9Y2G9 1366 aa19.14■□□□□ 0.65
CLCN4-201ENST00000380829 ARHGEF40Q8TER5 1519 aa19.14■□□□□ 0.65
CLCN4-201ENST00000380829 QRICH2Q9H0J4 1663 aa19.11■□□□□ 0.65
CLCN4-201ENST00000380829 PPP6R1Q9UPN7 881 aa19.11■□□□□ 0.65
CLCN4-201ENST00000380829 ASXL1Q8IXJ9 1541 aa19.1■□□□□ 0.65
CLCN4-201ENST00000380829 STAG3Q9UJ98 1225 aa19.1■□□□□ 0.65
CLCN4-201ENST00000380829 TRHP20396 242 aaPredicted RBP19.1■□□□□ 0.65
CLCN4-201ENST00000380829 ZFYVE9O95405 1425 aa19.09■□□□□ 0.65
CLCN4-201ENST00000380829 PPP2R1AP30153 589 aa19.08■□□□□ 0.64
CLCN4-201ENST00000380829 CARD14Q9BXL6 1004 aa19.07■□□□□ 0.64
CLCN4-201ENST00000380829 STK26Q9P289 416 aa19.06■□□□□ 0.64
CLCN4-201ENST00000380829 SMG6Q86US8 1419 aaKnown RBP19.06■□□□□ 0.64
CLCN4-201ENST00000380829 SAFB2Q14151 953 aaKnown RBP eCLIP19.06■□□□□ 0.64
CLCN4-201ENST00000380829 SALL2Q9Y467 1007 aaPredicted RBP19.06■□□□□ 0.64
CLCN4-201ENST00000380829 ARHGEF28Q8N1W1 1705 aaKnown RBP19.06■□□□□ 0.64
CLCN4-201ENST00000380829 NBR1Q14596 966 aa19.04■□□□□ 0.64
CLCN4-201ENST00000380829 NUDCQ9Y266 331 aa19.04■□□□□ 0.64
CLCN4-201ENST00000380829 SPATA31D1Q6ZQQ2 1576 aa19.04■□□□□ 0.64
CLCN4-201ENST00000380829 ESF1Q9H501 851 aaKnown RBP19.04■□□□□ 0.64
CLCN4-201ENST00000380829 SLC12A5Q9H2X9 1139 aa19.03■□□□□ 0.64
CLCN4-201ENST00000380829 NPC1L1Q9UHC9 1359 aa19.03■□□□□ 0.64
CLCN4-201ENST00000380829 A2ML1A8K2U0 1454 aa19.01■□□□□ 0.63
CLCN4-201ENST00000380829 ZMYM3Q14202 1370 aa19■□□□□ 0.63
CLCN4-201ENST00000380829 TULP4Q9NRJ4 1543 aa19■□□□□ 0.63
CLCN4-201ENST00000380829 EVC2Q86UK5 1308 aa19■□□□□ 0.63
CLCN4-201ENST00000380829 BLMP54132 1417 aaPredicted RBP18.99■□□□□ 0.63
CLCN4-201ENST00000380829 ADAMTS8Q9UP79 889 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms