RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 NCOA1Q15788 1441 aa15.88■□□□□ 0.13
DNMT3A-204ENST00000380756 BIVM-ERCC5R4GMW8 1640 aa15.88■□□□□ 0.13
DNMT3A-204ENST00000380756 GOLGA6L4A6NEF3 574 aa15.88■□□□□ 0.13
DNMT3A-204ENST00000380756 IFT140Q96RY7 1462 aa15.87■□□□□ 0.13
DNMT3A-204ENST00000380756 A0A0G2JS52 829 aa15.87■□□□□ 0.13
DNMT3A-204ENST00000380756 STK31Q9BXU1 1019 aa15.86■□□□□ 0.13
DNMT3A-204ENST00000380756 AAMPQ13685 434 aa15.86■□□□□ 0.13
DNMT3A-204ENST00000380756 KIAA1211Q6ZU35 1233 aa15.86■□□□□ 0.13
DNMT3A-204ENST00000380756 CFAP70Q5T0N1 1121 aa15.86■□□□□ 0.13
DNMT3A-204ENST00000380756 SLC4A10Q6U841 1118 aa15.85■□□□□ 0.13
DNMT3A-204ENST00000380756 PTPN23Q9H3S7 1636 aa15.85■□□□□ 0.13
DNMT3A-204ENST00000380756 TCP11L2Q8N4U5 519 aa15.84■□□□□ 0.13
DNMT3A-204ENST00000380756 CHMP5Q9NZZ3 219 aa15.84■□□□□ 0.13
DNMT3A-204ENST00000380756 MINK1Q8N4C8 1332 aaPredicted RBP15.84■□□□□ 0.13
DNMT3A-204ENST00000380756 AFAP1Q8N556 730 aa15.84■□□□□ 0.13
DNMT3A-204ENST00000380756 RIPK4P57078 832 aa15.84■□□□□ 0.13
DNMT3A-204ENST00000380756 ST18O60284 1047 aa15.83■□□□□ 0.12
DNMT3A-204ENST00000380756 DIAPH1O60610 1272 aaKnown RBP15.83■□□□□ 0.12
DNMT3A-204ENST00000380756 MTHFSP49914 203 aa15.83■□□□□ 0.12
DNMT3A-204ENST00000380756 PDE3AQ14432 1141 aa15.83■□□□□ 0.12
DNMT3A-204ENST00000380756 ABCC5O15440 1437 aa15.82■□□□□ 0.12
DNMT3A-204ENST00000380756 BCAR3O75815 825 aa15.82■□□□□ 0.12
DNMT3A-204ENST00000380756 SYNJ2O15056 1496 aa15.82■□□□□ 0.12
DNMT3A-204ENST00000380756 TRIM6-TRIM34B2RNG4 842 aa15.82■□□□□ 0.12
DNMT3A-204ENST00000380756 DDX49Q9Y6V7 483 aaKnown RBP15.82■□□□□ 0.12
DNMT3A-204ENST00000380756 RSPH6AQ9H0K4 717 aa15.81■□□□□ 0.12
DNMT3A-204ENST00000380756 RPRD2Q5VT52 1461 aaKnown RBP15.81■□□□□ 0.12
DNMT3A-204ENST00000380756 SYAP1Q96A49 352 aaPredicted RBP15.81■□□□□ 0.12
DNMT3A-204ENST00000380756 C22orf23Q9BZE7 217 aa15.81■□□□□ 0.12
DNMT3A-204ENST00000380756 FRAT2O75474 233 aaPredicted RBP15.8■□□□□ 0.12
DNMT3A-204ENST00000380756 CHAF1AQ13111 956 aaPredicted RBP15.8■□□□□ 0.12
DNMT3A-204ENST00000380756 LNPKQ9C0E8 428 aa15.8■□□□□ 0.12
DNMT3A-204ENST00000380756 PTPRKQ15262 1439 aa15.8■□□□□ 0.12
DNMT3A-204ENST00000380756 KIF16BQ96L93 1317 aa15.79■□□□□ 0.12
DNMT3A-204ENST00000380756 SKOR2Q2VWA4 1001 aaPredicted RBP15.79■□□□□ 0.12
DNMT3A-204ENST00000380756 TMEM132EQ6IEE7 984 aa15.79■□□□□ 0.12
DNMT3A-204ENST00000380756 ERBINQ96RT1 1412 aa15.79■□□□□ 0.12
DNMT3A-204ENST00000380756 ARHGAP5Q13017 1502 aa15.79■□□□□ 0.12
DNMT3A-204ENST00000380756 NAP1L2Q9ULW6 460 aaPredicted RBP15.79■□□□□ 0.12
DNMT3A-204ENST00000380756 KIAA2012Q0VF49 1180 aa15.78■□□□□ 0.12
DNMT3A-204ENST00000380756 NOL8Q76FK4 1167 aaKnown RBP15.78■□□□□ 0.12
DNMT3A-204ENST00000380756 GGNBP2Q9H3C7 697 aa15.78■□□□□ 0.12
DNMT3A-204ENST00000380756 CUL7Q14999 1698 aa15.77■□□□□ 0.12
DNMT3A-204ENST00000380756 KIAA0586Q9BVV6 1533 aa15.77■□□□□ 0.12
DNMT3A-204ENST00000380756 NUTM2FA1L443 756 aa15.76■□□□□ 0.11
DNMT3A-204ENST00000380756 COG3Q96JB2 828 aa15.76■□□□□ 0.11
DNMT3A-204ENST00000380756 PDZRN3Q9UPQ7 1066 aa15.76■□□□□ 0.11
DNMT3A-204ENST00000380756 IQGAP2Q13576 1575 aa15.75■□□□□ 0.11
DNMT3A-204ENST00000380756 IL27Q8NEV9 243 aa15.75■□□□□ 0.11
DNMT3A-204ENST00000380756 API5Q9BZZ5 524 aaKnown RBP15.75■□□□□ 0.11
DNMT3A-204ENST00000380756 BRPF3Q9ULD4 1205 aa15.75■□□□□ 0.11
DNMT3A-204ENST00000380756 CHMP4AQ9BY43 222 aa15.75■□□□□ 0.11
DNMT3A-204ENST00000380756 FOXD4L5Q5VV16 416 aaPredicted RBP15.75■□□□□ 0.11
DNMT3A-204ENST00000380756 FOXD4L4Q8WXT5 416 aaPredicted RBP15.75■□□□□ 0.11
DNMT3A-204ENST00000380756 SLC12A5Q9H2X9 1139 aa15.75■□□□□ 0.11
DNMT3A-204ENST00000380756 TAOK2Q9UL54 1235 aa15.74■□□□□ 0.11
DNMT3A-204ENST00000380756 LAMC3Q9Y6N6 1575 aa15.74■□□□□ 0.11
DNMT3A-204ENST00000380756 DRC7Q8IY82 874 aa15.74■□□□□ 0.11
DNMT3A-204ENST00000380756 NRDCO43847 1150 aa15.73■□□□□ 0.11
DNMT3A-204ENST00000380756 CABP2Q9NPB3 220 aa15.73■□□□□ 0.11
DNMT3A-204ENST00000380756 GOLGA6L6A8MZA4 724 aa15.73■□□□□ 0.11
DNMT3A-204ENST00000380756 AMPHP49418 695 aa15.73■□□□□ 0.11
DNMT3A-204ENST00000380756 SNAPC4Q5SXM2 1469 aa15.73■□□□□ 0.11
DNMT3A-204ENST00000380756 NGDNQ8NEJ9 315 aaKnown RBP15.72■□□□□ 0.11
DNMT3A-204ENST00000380756 SLFN5Q08AF3 891 aa15.72■□□□□ 0.11
DNMT3A-204ENST00000380756 SKAP1Q86WV1 359 aa15.72■□□□□ 0.11
DNMT3A-204ENST00000380756 C20orf194Q5TEA3 1177 aa15.71■□□□□ 0.11
DNMT3A-204ENST00000380756 CAMSAP2Q08AD1 1489 aa15.71■□□□□ 0.11
DNMT3A-204ENST00000380756 REC8O95072 547 aa15.71■□□□□ 0.11
DNMT3A-204ENST00000380756 EXOSC9Q06265 439 aaKnown RBP15.71■□□□□ 0.11
DNMT3A-204ENST00000380756 EID1Q9Y6B2 187 aa15.71■□□□□ 0.11
DNMT3A-204ENST00000380756 GNAI1P63096 354 aa15.7■□□□□ 0.1
DNMT3A-204ENST00000380756 UNC13AQ9UPW8 1703 aa15.7■□□□□ 0.1
DNMT3A-204ENST00000380756 SCAPERQ9BY12 1400 aa15.7■□□□□ 0.1
DNMT3A-204ENST00000380756 RILPL2Q969X0 211 aa15.7■□□□□ 0.1
DNMT3A-204ENST00000380756 HMOX1P09601 288 aa15.7■□□□□ 0.1
DNMT3A-204ENST00000380756 HSP90AA2PQ14568 343 aaPredicted RBP15.69■□□□□ 0.1
DNMT3A-204ENST00000380756 HDAC5Q9UQL6 1122 aa15.68■□□□□ 0.1
DNMT3A-204ENST00000380756 PLEKHH2Q8IVE3 1493 aa15.68■□□□□ 0.1
DNMT3A-204ENST00000380756 TSR2Q969E8 191 aaKnown RBP15.68■□□□□ 0.1
DNMT3A-204ENST00000380756 ARID3AQ99856 593 aa15.68■□□□□ 0.1
DNMT3A-204ENST00000380756 LTV1Q96GA3 475 aaPredicted RBP15.68■□□□□ 0.1
DNMT3A-204ENST00000380756 PHF14O94880 888 aa15.67■□□□□ 0.1
DNMT3A-204ENST00000380756 WDR63Q8IWG1 891 aa15.67■□□□□ 0.1
DNMT3A-204ENST00000380756 NINLQ9Y2I6 1382 aa15.67■□□□□ 0.1
DNMT3A-204ENST00000380756 PLB1Q6P1J6 1458 aa15.67■□□□□ 0.1
DNMT3A-204ENST00000380756 TRAK2O60296 914 aa15.67■□□□□ 0.1
DNMT3A-204ENST00000380756 GPATCH3Q96I76 525 aa15.67■□□□□ 0.1
DNMT3A-204ENST00000380756 ARHGEF11O15085 1522 aa15.66■□□□□ 0.1
DNMT3A-204ENST00000380756 MRE11P49959 708 aa15.66■□□□□ 0.1
DNMT3A-204ENST00000380756 FOXD4L6Q3SYB3 417 aaPredicted RBP15.66■□□□□ 0.1
DNMT3A-204ENST00000380756 FOXD4L3Q6VB84 417 aaPredicted RBP15.66■□□□□ 0.1
DNMT3A-204ENST00000380756 WWC1Q8IX03 1113 aa15.66■□□□□ 0.1
DNMT3A-204ENST00000380756 NUCB2P80303 420 aa15.65■□□□□ 0.1
DNMT3A-204ENST00000380756 CSPP1Q1MSJ5 1256 aa15.64■□□□□ 0.1
DNMT3A-204ENST00000380756 HTATSF1O43719 755 aaKnown RBP15.64■□□□□ 0.09
DNMT3A-204ENST00000380756 INTS3Q68E01 1043 aaKnown RBP15.64■□□□□ 0.09
DNMT3A-204ENST00000380756 CCDC141Q6ZP82 1450 aa15.64■□□□□ 0.09
DNMT3A-204ENST00000380756 MAGI1Q96QZ7 1491 aaPredicted RBP15.64■□□□□ 0.09
DNMT3A-204ENST00000380756 MVPQ14764 893 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms