RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 NEURL4Q96JN8 1562 aa18.4■□□□□ 0.54
SMN2-203ENST00000380743 ZFYVE9O95405 1425 aa18.4■□□□□ 0.54
SMN2-203ENST00000380743 LTKP29376 864 aa18.4■□□□□ 0.54
SMN2-203ENST00000380743 RIMS2Q9UQ26 1411 aa18.39■□□□□ 0.54
SMN2-203ENST00000380743 NUTM2DQ5VT03 806 aaPredicted RBP18.39■□□□□ 0.54
SMN2-203ENST00000380743 TXNDC2Q86VQ3 553 aa18.39■□□□□ 0.53
SMN2-203ENST00000380743 ANKLE2Q86XL3 938 aa18.39■□□□□ 0.53
SMN2-203ENST00000380743 NCKAP5LQ9HCH0 1330 aa18.38■□□□□ 0.53
SMN2-203ENST00000380743 RPGRIP1LQ68CZ1 1315 aa18.38■□□□□ 0.53
SMN2-203ENST00000380743 NEXMIFQ5QGS0 1516 aa18.37■□□□□ 0.53
SMN2-203ENST00000380743 EID1Q9Y6B2 187 aa18.37■□□□□ 0.53
SMN2-203ENST00000380743 SCAF11Q99590 1463 aaKnown RBP18.36■□□□□ 0.53
SMN2-203ENST00000380743 STRCQ7RTU9 1775 aa18.35■□□□□ 0.53
SMN2-203ENST00000380743 HDGFP51858 240 aaKnown RBP18.35■□□□□ 0.53
SMN2-203ENST00000380743 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.35■□□□□ 0.53
SMN2-203ENST00000380743 PPP1R15AO75807 674 aaPredicted RBP18.33■□□□□ 0.53
SMN2-203ENST00000380743 DCAF11Q8TEB1 546 aa18.33■□□□□ 0.53
SMN2-203ENST00000380743 PPLO60437 1756 aa18.33■□□□□ 0.52
SMN2-203ENST00000380743 L3MBTL2Q969R5 705 aa18.33■□□□□ 0.52
SMN2-203ENST00000380743 VGFO15240 615 aaPredicted RBP18.32■□□□□ 0.52
SMN2-203ENST00000380743 POLR1AO95602 1720 aaPredicted RBP18.32■□□□□ 0.52
SMN2-203ENST00000380743 IFT172Q9UG01 1749 aa18.31■□□□□ 0.52
SMN2-203ENST00000380743 KDM2AQ9Y2K7 1162 aa18.31■□□□□ 0.52
SMN2-203ENST00000380743 MED14O60244 1454 aa18.31■□□□□ 0.52
SMN2-203ENST00000380743 ADGRF5Q8IZF2 1346 aa18.3■□□□□ 0.52
SMN2-203ENST00000380743 PLEKHG1Q9ULL1 1385 aa18.3■□□□□ 0.52
SMN2-203ENST00000380743 NPHP4O75161 1426 aaPredicted RBP18.29■□□□□ 0.52
SMN2-203ENST00000380743 TONSLQ96HA7 1378 aa18.29■□□□□ 0.52
SMN2-203ENST00000380743 BCANQ96GW7 911 aa18.28■□□□□ 0.52
SMN2-203ENST00000380743 MYOM2P54296 1465 aa18.27■□□□□ 0.52
SMN2-203ENST00000380743 STAC3Q96MF2 364 aa18.26■□□□□ 0.51
SMN2-203ENST00000380743 IQGAP1P46940 1657 aa18.26■□□□□ 0.51
SMN2-203ENST00000380743 NRXN1Q9ULB1 1477 aa18.26■□□□□ 0.51
SMN2-203ENST00000380743 SLC26A8Q96RN1 970 aa18.25■□□□□ 0.51
SMN2-203ENST00000380743 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
SMN2-203ENST00000380743 PIK3C2GO75747 1445 aa18.24■□□□□ 0.51
SMN2-203ENST00000380743 SETBP1Q9Y6X0 1596 aa18.23■□□□□ 0.51
SMN2-203ENST00000380743 ADAMTS13Q76LX8 1427 aa18.23■□□□□ 0.51
SMN2-203ENST00000380743 NRXN3Q9Y4C0 1643 aa18.23■□□□□ 0.51
SMN2-203ENST00000380743 TIMELESSQ9UNS1 1208 aa18.23■□□□□ 0.51
SMN2-203ENST00000380743 TBX22Q9Y458 520 aa18.2■□□□□ 0.5
SMN2-203ENST00000380743 PRAG1Q86YV5 1406 aa18.2■□□□□ 0.5
SMN2-203ENST00000380743 CFAP70Q5T0N1 1121 aa18.19■□□□□ 0.5
SMN2-203ENST00000380743 ALKQ9UM73 1620 aa18.19■□□□□ 0.5
SMN2-203ENST00000380743 C14orf93Q9H972 538 aaKnown RBP18.18■□□□□ 0.5
SMN2-203ENST00000380743 NBPF8Q3BBV2 869 aa18.18■□□□□ 0.5
SMN2-203ENST00000380743 METP08581 1390 aa18.17■□□□□ 0.5
SMN2-203ENST00000380743 DIP2AQ14689 1571 aa18.17■□□□□ 0.5
SMN2-203ENST00000380743 SETD1AO15047 1707 aaKnown RBP18.16■□□□□ 0.5
SMN2-203ENST00000380743 TMEM132EQ6IEE7 984 aa18.14■□□□□ 0.49
SMN2-203ENST00000380743 ZNF335Q9H4Z2 1342 aaPredicted RBP18.13■□□□□ 0.49
SMN2-203ENST00000380743 NBPF1Q3BBV0 1214 aa18.13■□□□□ 0.49
SMN2-203ENST00000380743 ASXL1Q8IXJ9 1541 aa18.12■□□□□ 0.49
SMN2-203ENST00000380743 PTPRUQ92729 1446 aa18.12■□□□□ 0.49
SMN2-203ENST00000380743 LAMC1P11047 1609 aa18.11■□□□□ 0.49
SMN2-203ENST00000380743 PIK3R4Q99570 1358 aa18.11■□□□□ 0.49
SMN2-203ENST00000380743 KCNA6P17658 529 aa18.1■□□□□ 0.49
SMN2-203ENST00000380743 AMOTL2Q9Y2J4 779 aa18.1■□□□□ 0.49
SMN2-203ENST00000380743 ADGRB1O14514 1584 aa18.1■□□□□ 0.49
SMN2-203ENST00000380743 KIAA1210Q9ULL0 1709 aa18.09■□□□□ 0.49
SMN2-203ENST00000380743 TRPM1Q7Z4N2 1603 aa18.09■□□□□ 0.49
SMN2-203ENST00000380743 CHD2O14647 1828 aaKnown RBP18.09■□□□□ 0.49
SMN2-203ENST00000380743 STRCP1A6NGW2 1772 aa18.08■□□□□ 0.49
SMN2-203ENST00000380743 STK26Q9P289 416 aa18.08■□□□□ 0.48
SMN2-203ENST00000380743 YTHDC2Q9H6S0 1430 aaKnown RBP18.07■□□□□ 0.48
SMN2-203ENST00000380743 ROCK2O75116 1388 aaKnown RBP18.06■□□□□ 0.48
SMN2-203ENST00000380743 NWD1Q149M9 1564 aa18.06■□□□□ 0.48
SMN2-203ENST00000380743 LRPPRCP42704 1394 aaKnown RBP18.06■□□□□ 0.48
SMN2-203ENST00000380743 RALGAPBQ86X10 1494 aa18.05■□□□□ 0.48
SMN2-203ENST00000380743 XRN1Q8IZH2 1706 aaKnown RBP18.04■□□□□ 0.48
SMN2-203ENST00000380743 ABCC11Q96J66 1382 aa18.04■□□□□ 0.48
SMN2-203ENST00000380743 LTBP4Q8N2S1 1624 aa18.04■□□□□ 0.48
SMN2-203ENST00000380743 TRAK1Q9UPV9 953 aa18.03■□□□□ 0.48
SMN2-203ENST00000380743 GPRASP1Q5JY77 1395 aa18.02■□□□□ 0.48
SMN2-203ENST00000380743 ROBO2Q9HCK4 1378 aa18.02■□□□□ 0.48
SMN2-203ENST00000380743 TECPR2O15040 1411 aa18.02■□□□□ 0.48
SMN2-203ENST00000380743 RBM33Q96EV2 1170 aaKnown RBP18.02■□□□□ 0.47
SMN2-203ENST00000380743 NKTRP30414 1462 aaKnown RBP18.01■□□□□ 0.47
SMN2-203ENST00000380743 PROSER2Q86WR7 435 aaPredicted RBP18.01■□□□□ 0.47
SMN2-203ENST00000380743 CARD11Q9BXL7 1154 aa18.01■□□□□ 0.47
SMN2-203ENST00000380743 CPS1P31327 1500 aa18■□□□□ 0.47
SMN2-203ENST00000380743 PTCH1Q13635 1447 aa18■□□□□ 0.47
SMN2-203ENST00000380743 LRRC7Q96NW7 1537 aa17.99■□□□□ 0.47
SMN2-203ENST00000380743 WAPLQ7Z5K2 1190 aa17.99■□□□□ 0.47
SMN2-203ENST00000380743 KNDC1Q76NI1 1749 aa17.98■□□□□ 0.47
SMN2-203ENST00000380743 TMEM94Q12767 1356 aa17.98■□□□□ 0.47
SMN2-203ENST00000380743 SIRT1Q96EB6 747 aa17.98■□□□□ 0.47
SMN2-203ENST00000380743 PRAM1Q96QH2 718 aa17.98■□□□□ 0.47
SMN2-203ENST00000380743 PLEKHH1Q9ULM0 1364 aa17.97■□□□□ 0.47
SMN2-203ENST00000380743 DLC1Q96QB1 1528 aa17.96■□□□□ 0.47
SMN2-203ENST00000380743 FAM135BQ49AJ0 1406 aa17.96■□□□□ 0.47
SMN2-203ENST00000380743 ZEB1P37275 1124 aaPredicted RBP17.96■□□□□ 0.47
SMN2-203ENST00000380743 SAFB2Q14151 953 aaKnown RBP eCLIP17.95■□□□□ 0.46
SMN2-203ENST00000380743 ARHGEF28Q8N1W1 1705 aaKnown RBP17.95■□□□□ 0.46
SMN2-203ENST00000380743 POGKQ9P215 609 aa17.94■□□□□ 0.46
SMN2-203ENST00000380743 XIRP1Q702N8 1843 aaKnown RBP17.93■□□□□ 0.46
SMN2-203ENST00000380743 C14orf37Q86TY3 774 aa17.91■□□□□ 0.46
SMN2-203ENST00000380743 CERKQ8TCT0 537 aa17.91■□□□□ 0.46
SMN2-203ENST00000380743 NCOA3Q9Y6Q9 1424 aa17.91■□□□□ 0.46
SMN2-203ENST00000380743 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms