RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 PARD3Q8TEW0 1356 aa17.07■□□□□ 0.32
VPS16-202ENST00000380445 MAP3K4Q9Y6R4 1608 aa17.06■□□□□ 0.32
VPS16-202ENST00000380445 ERICH6BQ5W0A0 696 aa17.06■□□□□ 0.32
VPS16-202ENST00000380445 GGT6Q6P531 493 aa17.06■□□□□ 0.32
VPS16-202ENST00000380445 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
VPS16-202ENST00000380445 ABCA6Q8N139 1617 aa17.06■□□□□ 0.32
VPS16-202ENST00000380445 UGGT1Q9NYU2 1555 aa17.04■□□□□ 0.32
VPS16-202ENST00000380445 PANK3Q9H999 370 aa17.04■□□□□ 0.32
VPS16-202ENST00000380445 GLI2P10070 1586 aa17.04■□□□□ 0.32
VPS16-202ENST00000380445 NPATQ14207 1427 aa17.03■□□□□ 0.32
VPS16-202ENST00000380445 LRPPRCP42704 1394 aaKnown RBP17.03■□□□□ 0.32
VPS16-202ENST00000380445 RAPGEF3O95398 923 aa17.03■□□□□ 0.32
VPS16-202ENST00000380445 TSHZ2Q9NRE2 1034 aa17.03■□□□□ 0.32
VPS16-202ENST00000380445 IFT172Q9UG01 1749 aa17.02■□□□□ 0.32
VPS16-202ENST00000380445 ADGRB3O60242 1522 aa17.01■□□□□ 0.31
VPS16-202ENST00000380445 ABCC3O15438 1527 aa17.01■□□□□ 0.31
VPS16-202ENST00000380445 NRXN1Q9ULB1 1477 aa17■□□□□ 0.31
VPS16-202ENST00000380445 DIP2CQ9Y2E4 1556 aa17■□□□□ 0.31
VPS16-202ENST00000380445 RICTORQ6R327 1708 aa17■□□□□ 0.31
VPS16-202ENST00000380445 RPGRIP1LQ68CZ1 1315 aa17■□□□□ 0.31
VPS16-202ENST00000380445 SMG6Q86US8 1419 aaKnown RBP16.99■□□□□ 0.31
VPS16-202ENST00000380445 ADGRF5Q8IZF2 1346 aa16.99■□□□□ 0.31
VPS16-202ENST00000380445 MROH2AA6NES4 1674 aa16.99■□□□□ 0.31
VPS16-202ENST00000380445 CFAP70Q5T0N1 1121 aa16.99■□□□□ 0.31
VPS16-202ENST00000380445 SYNMO15061 1565 aa16.98■□□□□ 0.31
VPS16-202ENST00000380445 CHGAP10645 457 aaKnown RBP16.98■□□□□ 0.31
VPS16-202ENST00000380445 KNSTRNQ9Y448 316 aa16.97■□□□□ 0.31
VPS16-202ENST00000380445 CAMSAP1Q5T5Y3 1602 aa16.97■□□□□ 0.31
VPS16-202ENST00000380445 CC2D1BQ5T0F9 858 aaKnown RBP16.96■□□□□ 0.31
VPS16-202ENST00000380445 NUDCQ9Y266 331 aa16.96■□□□□ 0.31
VPS16-202ENST00000380445 ZC3H13Q5T200 1668 aaKnown RBP16.96■□□□□ 0.31
VPS16-202ENST00000380445 NOS1P29475 1434 aa16.96■□□□□ 0.31
VPS16-202ENST00000380445 SETBP1Q9Y6X0 1596 aa16.96■□□□□ 0.31
VPS16-202ENST00000380445 ARHGAP31Q2M1Z3 1444 aa16.95■□□□□ 0.3
VPS16-202ENST00000380445 INSRP06213 1382 aa16.95■□□□□ 0.3
VPS16-202ENST00000380445 KDM5AP29375 1690 aaKnown RBP16.94■□□□□ 0.3
VPS16-202ENST00000380445 PPLO60437 1756 aa16.93■□□□□ 0.3
VPS16-202ENST00000380445 ZMYM4Q5VZL5 1548 aa16.93■□□□□ 0.3
VPS16-202ENST00000380445 SBNO2Q9Y2G9 1366 aa16.93■□□□□ 0.3
VPS16-202ENST00000380445 CFAP65Q6ZU64 1925 aaKnown RBP16.93■□□□□ 0.3
VPS16-202ENST00000380445 PIK3C2GO75747 1445 aa16.92■□□□□ 0.3
VPS16-202ENST00000380445 FAM69CQ0P6D2 419 aa16.91■□□□□ 0.3
VPS16-202ENST00000380445 C14orf93Q9H972 538 aaKnown RBP16.91■□□□□ 0.3
VPS16-202ENST00000380445 MYO3AQ8NEV4 1616 aa16.91■□□□□ 0.3
VPS16-202ENST00000380445 PPP4R2Q9NY27 417 aa16.91■□□□□ 0.3
VPS16-202ENST00000380445 NPC1L1Q9UHC9 1359 aa16.91■□□□□ 0.3
VPS16-202ENST00000380445 YEATS2Q9ULM3 1422 aa16.9■□□□□ 0.3
VPS16-202ENST00000380445 PIK3C2BO00750 1634 aa16.9■□□□□ 0.3
VPS16-202ENST00000380445 IRX6P78412 446 aaPredicted RBP16.9■□□□□ 0.3
VPS16-202ENST00000380445 ASXL1Q8IXJ9 1541 aa16.89■□□□□ 0.3
VPS16-202ENST00000380445 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.3
VPS16-202ENST00000380445 SLC52A1Q9NWF4 448 aa16.89■□□□□ 0.3
VPS16-202ENST00000380445 DIP2BQ9P265 1576 aa16.89■□□□□ 0.29
VPS16-202ENST00000380445 PDE3BQ13370 1112 aa16.89■□□□□ 0.29
VPS16-202ENST00000380445 ERVK-7P63135 1459 aa16.88■□□□□ 0.29
VPS16-202ENST00000380445 MYOM1P52179 1685 aa16.88■□□□□ 0.29
VPS16-202ENST00000380445 AMER1Q5JTC6 1135 aaPredicted RBP16.88■□□□□ 0.29
VPS16-202ENST00000380445 CENPJQ9HC77 1338 aaPredicted RBP16.88■□□□□ 0.29
VPS16-202ENST00000380445 SIGLEC1Q9BZZ2 1709 aa16.88■□□□□ 0.29
VPS16-202ENST00000380445 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
VPS16-202ENST00000380445 RNF123Q5XPI4 1314 aa16.85■□□□□ 0.29
VPS16-202ENST00000380445 PPP2R1AP30153 589 aa16.84■□□□□ 0.29
VPS16-202ENST00000380445 BLMP54132 1417 aaPredicted RBP16.84■□□□□ 0.29
VPS16-202ENST00000380445 ADGRB1O14514 1584 aa16.84■□□□□ 0.29
VPS16-202ENST00000380445 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
VPS16-202ENST00000380445 KIF13AQ9H1H9 1805 aa16.83■□□□□ 0.28
VPS16-202ENST00000380445 ZFYVE9O95405 1425 aa16.83■□□□□ 0.28
VPS16-202ENST00000380445 IDI1Q13907 227 aa16.83■□□□□ 0.28
VPS16-202ENST00000380445 TRAK1Q9UPV9 953 aa16.83■□□□□ 0.28
VPS16-202ENST00000380445 NEXMIFQ5QGS0 1516 aa16.83■□□□□ 0.28
VPS16-202ENST00000380445 REREQ9P2R6 1566 aa16.82■□□□□ 0.28
VPS16-202ENST00000380445 WDR43Q15061 677 aaKnown RBP eCLIP16.8■□□□□ 0.28
VPS16-202ENST00000380445 PREX1Q8TCU6 1659 aa16.8■□□□□ 0.28
VPS16-202ENST00000380445 AGLP35573 1532 aa16.8■□□□□ 0.28
VPS16-202ENST00000380445 PUS7Q96PZ0 661 aaKnown RBP16.8■□□□□ 0.28
VPS16-202ENST00000380445 QRICH2Q9H0J4 1663 aa16.79■□□□□ 0.28
VPS16-202ENST00000380445 TSPOAP1O95153 1857 aa16.79■□□□□ 0.28
VPS16-202ENST00000380445 TMEM132EQ6IEE7 984 aa16.78■□□□□ 0.28
VPS16-202ENST00000380445 SENP3-EIF4A1A0A087X0R7 540 aa16.77■□□□□ 0.28
VPS16-202ENST00000380445 ADAMTS8Q9UP79 889 aa16.77■□□□□ 0.27
VPS16-202ENST00000380445 SALL2Q9Y467 1007 aaPredicted RBP16.76■□□□□ 0.27
VPS16-202ENST00000380445 TMEM131LA2VDJ0 1609 aa16.76■□□□□ 0.27
VPS16-202ENST00000380445 EVC2Q86UK5 1308 aa16.75■□□□□ 0.27
VPS16-202ENST00000380445 CARD14Q9BXL6 1004 aa16.75■□□□□ 0.27
VPS16-202ENST00000380445 NUTM2DQ5VT03 806 aaPredicted RBP16.74■□□□□ 0.27
VPS16-202ENST00000380445 RCAN3Q9UKA8 241 aa16.74■□□□□ 0.27
VPS16-202ENST00000380445 ARHGEF28Q8N1W1 1705 aaKnown RBP16.73■□□□□ 0.27
VPS16-202ENST00000380445 B4GALNT3Q6L9W6 998 aa16.72■□□□□ 0.27
VPS16-202ENST00000380445 STAG3Q9UJ98 1225 aa16.71■□□□□ 0.27
VPS16-202ENST00000380445 RBM19Q9Y4C8 960 aaKnown RBP16.71■□□□□ 0.27
VPS16-202ENST00000380445 RRP1P56182 461 aaKnown RBP16.7■□□□□ 0.26
VPS16-202ENST00000380445 FBXO31Q5XUX0 539 aaPredicted RBP16.7■□□□□ 0.26
VPS16-202ENST00000380445 MYO5BQ9ULV0 1848 aa16.7■□□□□ 0.26
VPS16-202ENST00000380445 NSD3Q9BZ95 1437 aa16.69■□□□□ 0.26
VPS16-202ENST00000380445 SLC12A5Q9H2X9 1139 aa16.69■□□□□ 0.26
VPS16-202ENST00000380445 USP32Q8NFA0 1604 aa16.68■□□□□ 0.26
VPS16-202ENST00000380445 NGEFQ8N5V2 710 aa16.68■□□□□ 0.26
VPS16-202ENST00000380445 CDCA7LQ96GN5 454 aa16.68■□□□□ 0.26
VPS16-202ENST00000380445 NINLQ9Y2I6 1382 aa16.68■□□□□ 0.26
VPS16-202ENST00000380445 MORC1Q86VD1 984 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms