RNA–Protein interactions for RNA: ENST00000380221.7

TRAPPC10-202, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC10, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-202ENST00000380221 KDM5AP29375 1690 aaKnown RBP39.5■■■■□ 3.91
TRAPPC10-202ENST00000380221 MYOM2P54296 1465 aa39.5■■■■□ 3.91
TRAPPC10-202ENST00000380221 NUTM2DQ5VT03 806 aaPredicted RBP39.49■■■■□ 3.91
TRAPPC10-202ENST00000380221 ADGRF5Q8IZF2 1346 aa39.47■■■■□ 3.91
TRAPPC10-202ENST00000380221 SETD1BQ9UPS6 1966 aaKnown RBP39.43■■■■□ 3.9
TRAPPC10-202ENST00000380221 TRPM1Q7Z4N2 1603 aa39.41■■■■□ 3.9
TRAPPC10-202ENST00000380221 NRXN1Q9ULB1 1477 aa39.41■■■■□ 3.9
TRAPPC10-202ENST00000380221 CEP170BQ9Y4F5 1589 aaPredicted RBP39.41■■■■□ 3.9
TRAPPC10-202ENST00000380221 VGFO15240 615 aaPredicted RBP39.41■■■■□ 3.9
TRAPPC10-202ENST00000380221 RIMS2Q9UQ26 1411 aa39.4■■■■□ 3.9
TRAPPC10-202ENST00000380221 RALGAPBQ86X10 1494 aa39.4■■■■□ 3.9
TRAPPC10-202ENST00000380221 ZNF316A6NFI3 1004 aaPredicted RBP39.38■■■■□ 3.9
TRAPPC10-202ENST00000380221 ZFYVE9O95405 1425 aa39.36■■■■□ 3.89
TRAPPC10-202ENST00000380221 TMEM2Q9UHN6 1383 aa39.35■■■■□ 3.89
TRAPPC10-202ENST00000380221 ZNF142P52746 1687 aaPredicted RBP39.35■■■■□ 3.89
TRAPPC10-202ENST00000380221 NBPF1Q3BBV0 1214 aa39.33■■■■□ 3.89
TRAPPC10-202ENST00000380221 PIK3C2GO75747 1445 aa39.33■■■■□ 3.89
TRAPPC10-202ENST00000380221 THEMISQ8N1K5 641 aaPredicted RBP39.32■■■■□ 3.89
TRAPPC10-202ENST00000380221 ROCK2O75116 1388 aaKnown RBP39.31■■■■□ 3.88
TRAPPC10-202ENST00000380221 CFAP70Q5T0N1 1121 aa39.28■■■■□ 3.88
TRAPPC10-202ENST00000380221 SENP3Q9H4L4 574 aaPredicted RBP39.28■■■■□ 3.88
TRAPPC10-202ENST00000380221 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.28■■■■□ 3.88
TRAPPC10-202ENST00000380221 KIAA1210Q9ULL0 1709 aa39.26■■■■□ 3.88
TRAPPC10-202ENST00000380221 SLIT1O75093 1534 aa39.26■■■■□ 3.88
TRAPPC10-202ENST00000380221 HDGFP51858 240 aaKnown RBP39.26■■■■□ 3.87
TRAPPC10-202ENST00000380221 CARD11Q9BXL7 1154 aa39.26■■■■□ 3.87
TRAPPC10-202ENST00000380221 ARHGAP23Q9P227 1491 aa39.24■■■■□ 3.87
TRAPPC10-202ENST00000380221 GPRASP1Q5JY77 1395 aa39.22■■■■□ 3.87
TRAPPC10-202ENST00000380221 LTKP29376 864 aa39.21■■■■□ 3.87
TRAPPC10-202ENST00000380221 C14orf93Q9H972 538 aaKnown RBP39.21■■■■□ 3.87
TRAPPC10-202ENST00000380221 TXNDC2Q86VQ3 553 aa39.2■■■■□ 3.87
TRAPPC10-202ENST00000380221 HIRIP3Q9BW71 556 aaPredicted RBP39.18■■■■□ 3.86
TRAPPC10-202ENST00000380221 EIF4G2P78344 907 aaKnown RBP eCLIP39.18■■■■□ 3.863e-7■■■■■ 29.3
TRAPPC10-202ENST00000380221 EID1Q9Y6B2 187 aa39.18■■■■□ 3.86
TRAPPC10-202ENST00000380221 HSPA5P11021 654 aaKnown RBP39.15■■■■□ 3.86
TRAPPC10-202ENST00000380221 LAMC1P11047 1609 aa39.15■■■■□ 3.86
TRAPPC10-202ENST00000380221 USP47Q96K76 1375 aa39.13■■■■□ 3.85
TRAPPC10-202ENST00000380221 ALKQ9UM73 1620 aa39.11■■■■□ 3.85
TRAPPC10-202ENST00000380221 NRXN3Q9Y4C0 1643 aa39.11■■■■□ 3.85
TRAPPC10-202ENST00000380221 SETBP1Q9Y6X0 1596 aa39.11■■■■□ 3.85
TRAPPC10-202ENST00000380221 SCAF11Q99590 1463 aaKnown RBP39.09■■■■□ 3.85
TRAPPC10-202ENST00000380221 TMEM132EQ6IEE7 984 aa39.09■■■■□ 3.85
TRAPPC10-202ENST00000380221 IQGAP1P46940 1657 aa39.09■■■■□ 3.85
TRAPPC10-202ENST00000380221 PLEKHG1Q9ULL1 1385 aa39.08■■■■□ 3.85
TRAPPC10-202ENST00000380221 ADGRB1O14514 1584 aa39.08■■■■□ 3.85
TRAPPC10-202ENST00000380221 BCANQ96GW7 911 aa39.08■■■■□ 3.85
TRAPPC10-202ENST00000380221 ANKLE2Q86XL3 938 aa39.04■■■■□ 3.84
TRAPPC10-202ENST00000380221 SETD1AO15047 1707 aaKnown RBP39.03■■■■□ 3.84
TRAPPC10-202ENST00000380221 ASXL1Q8IXJ9 1541 aa39.02■■■■□ 3.84
TRAPPC10-202ENST00000380221 ADAMTS13Q76LX8 1427 aa38.98■■■■□ 3.83
TRAPPC10-202ENST00000380221 ST20-MTHFSA0A0A6YYL1 179 aa38.98■■■■□ 3.83
TRAPPC10-202ENST00000380221 DIEXFQ68CQ4 756 aaKnown RBP38.97■■■■□ 3.83
TRAPPC10-202ENST00000380221 LMTK3Q96Q04 1460 aa38.96■■■■□ 3.83
TRAPPC10-202ENST00000380221 HSPA2P54652 639 aa38.93■■■■□ 3.82
TRAPPC10-202ENST00000380221 SLC26A8Q96RN1 970 aa38.93■■■■□ 3.82
TRAPPC10-202ENST00000380221 TRAK1Q9UPV9 953 aa38.93■■■■□ 3.82
TRAPPC10-202ENST00000380221 POLR1AO95602 1720 aaPredicted RBP38.92■■■■□ 3.82
TRAPPC10-202ENST00000380221 METP08581 1390 aa38.92■■■■□ 3.82
TRAPPC10-202ENST00000380221 NCKAP5LQ9HCH0 1330 aa38.91■■■■□ 3.82
TRAPPC10-202ENST00000380221 MED14O60244 1454 aa38.91■■■■□ 3.82
TRAPPC10-202ENST00000380221 STK26Q9P289 416 aa38.9■■■■□ 3.82
TRAPPC10-202ENST00000380221 YTHDC2Q9H6S0 1430 aaKnown RBP38.9■■■■□ 3.82
TRAPPC10-202ENST00000380221 EIF3AQ14152 1382 aaKnown RBP38.87■■■■□ 3.81
TRAPPC10-202ENST00000380221 TBX22Q9Y458 520 aa38.85■■■■□ 3.81
TRAPPC10-202ENST00000380221 NPHP4O75161 1426 aaPredicted RBP38.84■■■■□ 3.81
TRAPPC10-202ENST00000380221 DIP2AQ14689 1571 aa38.84■■■■□ 3.81
TRAPPC10-202ENST00000380221 ARHGEF28Q8N1W1 1705 aaKnown RBP38.82■■■■□ 3.81
TRAPPC10-202ENST00000380221 LRPPRCP42704 1394 aaKnown RBP38.81■■■■□ 3.8
TRAPPC10-202ENST00000380221 C11orf95C9JLR9 678 aaPredicted RBP38.8■■■■□ 3.8
TRAPPC10-202ENST00000380221 TESK2Q96S53 571 aa38.8■■■■□ 3.8
TRAPPC10-202ENST00000380221 CENPJQ9HC77 1338 aaPredicted RBP38.76■■■■□ 3.79
TRAPPC10-202ENST00000380221 ABCC11Q96J66 1382 aa38.75■■■■□ 3.79
TRAPPC10-202ENST00000380221 PTPRUQ92729 1446 aa38.74■■■■□ 3.79
TRAPPC10-202ENST00000380221 WASHC2AQ641Q2 1341 aa38.72■■■■□ 3.79
TRAPPC10-202ENST00000380221 QRICH2Q9H0J4 1663 aa38.71■■■■□ 3.79
TRAPPC10-202ENST00000380221 KNDC1Q76NI1 1749 aa38.7■■■■□ 3.79
TRAPPC10-202ENST00000380221 DLC1Q96QB1 1528 aa38.7■■■■□ 3.79
TRAPPC10-202ENST00000380221 PRAM1Q96QH2 718 aa38.7■■■■□ 3.79
TRAPPC10-202ENST00000380221 STRCQ7RTU9 1775 aa38.68■■■■□ 3.78
TRAPPC10-202ENST00000380221 SAFB2Q14151 953 aaKnown RBP eCLIP38.67■■■■□ 3.782e-6■■■□□ 17.9
TRAPPC10-202ENST00000380221 TECPR2O15040 1411 aa38.67■■■■□ 3.78
TRAPPC10-202ENST00000380221 AMOTL2Q9Y2J4 779 aa38.67■■■■□ 3.78
TRAPPC10-202ENST00000380221 KIF7Q2M1P5 1343 aa38.67■■■■□ 3.78
TRAPPC10-202ENST00000380221 POGKQ9P215 609 aa38.66■■■■□ 3.78
TRAPPC10-202ENST00000380221 CCDC7Q96M83 1385 aa38.66■■■■□ 3.78
TRAPPC10-202ENST00000380221 PIK3R4Q99570 1358 aa38.66■■■■□ 3.78
TRAPPC10-202ENST00000380221 DISP3Q9P2K9 1392 aa38.65■■■■□ 3.78
TRAPPC10-202ENST00000380221 CPS1P31327 1500 aa38.65■■■■□ 3.78
TRAPPC10-202ENST00000380221 WAPLQ7Z5K2 1190 aa38.65■■■■□ 3.78
TRAPPC10-202ENST00000380221 TMF1P82094 1093 aa38.64■■■■□ 3.78
TRAPPC10-202ENST00000380221 SBNO2Q9Y2G9 1366 aa38.63■■■■□ 3.77
TRAPPC10-202ENST00000380221 PLEKHH1Q9ULM0 1364 aa38.62■■■■□ 3.77
TRAPPC10-202ENST00000380221 ROBO2Q9HCK4 1378 aa38.61■■■■□ 3.77
TRAPPC10-202ENST00000380221 CHD2O14647 1828 aaKnown RBP38.61■■■■□ 3.77
TRAPPC10-202ENST00000380221 POLR3GLQ9BT43 218 aa38.6■■■■□ 3.77
TRAPPC10-202ENST00000380221 XRN1Q8IZH2 1706 aaKnown RBP38.6■■■■□ 3.77
TRAPPC10-202ENST00000380221 SIRT1Q96EB6 747 aa38.59■■■■□ 3.77
TRAPPC10-202ENST00000380221 FAM135BQ49AJ0 1406 aa38.59■■■■□ 3.77
TRAPPC10-202ENST00000380221 DDX10Q13206 875 aaKnown RBP38.57■■■■□ 3.76
TRAPPC10-202ENST00000380221 KCNA6P17658 529 aa38.56■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms