RNA–Protein interactions for RNA: ENST00000380051.6

RPP40-202, Transcript of ribonuclease P/MRP subunit p40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPP40, Length 1,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-202ENST00000380051 DCAF11Q8TEB1 546 aa21.63■■□□□ 1.05
RPP40-202ENST00000380051 A2ML1A8K2U0 1454 aa21.62■■□□□ 1.05
RPP40-202ENST00000380051 MYO3AQ8NEV4 1616 aa21.62■■□□□ 1.05
RPP40-202ENST00000380051 MYO5BQ9ULV0 1848 aa21.59■■□□□ 1.05
RPP40-202ENST00000380051 UBR1Q8IWV7 1749 aa21.59■■□□□ 1.05
RPP40-202ENST00000380051 THEMISQ8N1K5 641 aaPredicted RBP21.58■■□□□ 1.05
RPP40-202ENST00000380051 KDM2AQ9Y2K7 1162 aa21.58■■□□□ 1.05
RPP40-202ENST00000380051 HDGFP51858 240 aaKnown RBP21.58■■□□□ 1.04
RPP40-202ENST00000380051 UHRF1BP1Q6BDS2 1440 aa21.57■■□□□ 1.04
RPP40-202ENST00000380051 CEP170BQ9Y4F5 1589 aaPredicted RBP21.57■■□□□ 1.04
RPP40-202ENST00000380051 VGFO15240 615 aaPredicted RBP21.56■■□□□ 1.04
RPP40-202ENST00000380051 ZNF142P52746 1687 aaPredicted RBP21.55■■□□□ 1.04
RPP40-202ENST00000380051 PPLO60437 1756 aa21.55■■□□□ 1.04
RPP40-202ENST00000380051 IFT172Q9UG01 1749 aa21.54■■□□□ 1.04
RPP40-202ENST00000380051 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.54■■□□□ 1.04
RPP40-202ENST00000380051 NEXMIFQ5QGS0 1516 aa21.54■■□□□ 1.04
RPP40-202ENST00000380051 MYOM2P54296 1465 aa21.53■■□□□ 1.04
RPP40-202ENST00000380051 ZFYVE9O95405 1425 aa21.53■■□□□ 1.04
RPP40-202ENST00000380051 TMEM2Q9UHN6 1383 aa21.53■■□□□ 1.04
RPP40-202ENST00000380051 RIMS2Q9UQ26 1411 aa21.52■■□□□ 1.04
RPP40-202ENST00000380051 NBPF8Q3BBV2 869 aa21.5■■□□□ 1.03
RPP40-202ENST00000380051 PRAG1Q86YV5 1406 aa21.49■■□□□ 1.03
RPP40-202ENST00000380051 SLIT1O75093 1534 aa21.49■■□□□ 1.03
RPP40-202ENST00000380051 ARHGAP23Q9P227 1491 aa21.49■■□□□ 1.03
RPP40-202ENST00000380051 EID1Q9Y6B2 187 aa21.49■■□□□ 1.03
RPP40-202ENST00000380051 ADGRF5Q8IZF2 1346 aa21.49■■□□□ 1.03
RPP40-202ENST00000380051 NRXN1Q9ULB1 1477 aa21.48■■□□□ 1.03
RPP40-202ENST00000380051 NUTM2DQ5VT03 806 aaPredicted RBP21.47■■□□□ 1.03
RPP40-202ENST00000380051 TXNDC2Q86VQ3 553 aa21.46■■□□□ 1.03
RPP40-202ENST00000380051 PIK3C2GO75747 1445 aa21.43■■□□□ 1.02
RPP40-202ENST00000380051 LTKP29376 864 aa21.43■■□□□ 1.02
RPP40-202ENST00000380051 ANKLE2Q86XL3 938 aa21.43■■□□□ 1.02
RPP40-202ENST00000380051 C14orf93Q9H972 538 aaKnown RBP21.41■■□□□ 1.02
RPP40-202ENST00000380051 RALGAPBQ86X10 1494 aa21.4■■□□□ 1.02
RPP40-202ENST00000380051 KIAA1210Q9ULL0 1709 aa21.4■■□□□ 1.02
RPP40-202ENST00000380051 PLEKHG1Q9ULL1 1385 aa21.39■■□□□ 1.02
RPP40-202ENST00000380051 SCAF11Q99590 1463 aaKnown RBP21.39■■□□□ 1.02
RPP40-202ENST00000380051 TRPM1Q7Z4N2 1603 aa21.39■■□□□ 1.01
RPP40-202ENST00000380051 CFAP70Q5T0N1 1121 aa21.39■■□□□ 1.01
RPP40-202ENST00000380051 LMTK3Q96Q04 1460 aa21.38■■□□□ 1.01
RPP40-202ENST00000380051 ROCK2O75116 1388 aaKnown RBP21.36■■□□□ 1.01
RPP40-202ENST00000380051 BCANQ96GW7 911 aa21.36■■□□□ 1.01
RPP40-202ENST00000380051 NBPF1Q3BBV0 1214 aa21.35■■□□□ 1.01
RPP40-202ENST00000380051 SETBP1Q9Y6X0 1596 aa21.35■■□□□ 1.01
RPP40-202ENST00000380051 GPRASP1Q5JY77 1395 aa21.35■■□□□ 1.01
RPP40-202ENST00000380051 LAMC1P11047 1609 aa21.34■■□□□ 1.01
RPP40-202ENST00000380051 CARD11Q9BXL7 1154 aa21.33■■□□□ 1.01
RPP40-202ENST00000380051 ALKQ9UM73 1620 aa21.32■■□□□ 1
RPP40-202ENST00000380051 HSPA2P54652 639 aa21.32■■□□□ 1
RPP40-202ENST00000380051 MED14O60244 1454 aa21.31■■□□□ 1
RPP40-202ENST00000380051 NRXN3Q9Y4C0 1643 aa21.31■■□□□ 1
RPP40-202ENST00000380051 TBX22Q9Y458 520 aa21.31■■□□□ 1
RPP40-202ENST00000380051 NCKAP5LQ9HCH0 1330 aa21.3■■□□□ 1
RPP40-202ENST00000380051 POLR1AO95602 1720 aaPredicted RBP21.3■■□□□ 1
RPP40-202ENST00000380051 ADAMTS13Q76LX8 1427 aa21.3■■□□□ 1
RPP40-202ENST00000380051 IQGAP1P46940 1657 aa21.29■■□□□ 1
RPP40-202ENST00000380051 NPHP4O75161 1426 aaPredicted RBP21.28■■□□□ 1
RPP40-202ENST00000380051 TMEM132EQ6IEE7 984 aa21.27■■□□□ 1
RPP40-202ENST00000380051 ADGRB1O14514 1584 aa21.27■■□□□ 1
RPP40-202ENST00000380051 DIP2AQ14689 1571 aa21.27■□□□□ 0.99
RPP40-202ENST00000380051 EIF4G2P78344 907 aaKnown RBP eCLIP21.26■□□□□ 0.99
RPP40-202ENST00000380051 SETD1AO15047 1707 aaKnown RBP21.26■□□□□ 0.99
RPP40-202ENST00000380051 SLC26A8Q96RN1 970 aa21.26■□□□□ 0.99
RPP40-202ENST00000380051 ASXL1Q8IXJ9 1541 aa21.23■□□□□ 0.99
RPP40-202ENST00000380051 METP08581 1390 aa21.22■□□□□ 0.99
RPP40-202ENST00000380051 USP47Q96K76 1375 aa21.22■□□□□ 0.99
RPP40-202ENST00000380051 PIK3R4Q99570 1358 aa21.22■□□□□ 0.99
RPP40-202ENST00000380051 YTHDC2Q9H6S0 1430 aaKnown RBP21.21■□□□□ 0.99
RPP40-202ENST00000380051 LRPPRCP42704 1394 aaKnown RBP21.21■□□□□ 0.99
RPP40-202ENST00000380051 STRCQ7RTU9 1775 aa21.2■□□□□ 0.98
RPP40-202ENST00000380051 HSPA5P11021 654 aaKnown RBP21.2■□□□□ 0.98
RPP40-202ENST00000380051 EIF3AQ14152 1382 aaKnown RBP21.19■□□□□ 0.98
RPP40-202ENST00000380051 ABCC11Q96J66 1382 aa21.19■□□□□ 0.98
RPP40-202ENST00000380051 TRAK1Q9UPV9 953 aa21.19■□□□□ 0.98
RPP40-202ENST00000380051 STK26Q9P289 416 aa21.18■□□□□ 0.98
RPP40-202ENST00000380051 SIRT1Q96EB6 747 aa21.17■□□□□ 0.98
RPP40-202ENST00000380051 ST20-MTHFSA0A0A6YYL1 179 aa21.16■□□□□ 0.98
RPP40-202ENST00000380051 DLC1Q96QB1 1528 aa21.15■□□□□ 0.98
RPP40-202ENST00000380051 PPP4R3CPQ6ZMV5 832 aa21.14■□□□□ 0.98
RPP40-202ENST00000380051 AMOTL2Q9Y2J4 779 aa21.14■□□□□ 0.98
RPP40-202ENST00000380051 TECPR2O15040 1411 aa21.14■□□□□ 0.97
RPP40-202ENST00000380051 PTPRUQ92729 1446 aa21.14■□□□□ 0.97
RPP40-202ENST00000380051 SLC24A1O60721 1099 aa21.13■□□□□ 0.97
RPP40-202ENST00000380051 ZNF316A6NFI3 1004 aaPredicted RBP21.13■□□□□ 0.97
RPP40-202ENST00000380051 CHD2O14647 1828 aaKnown RBP21.12■□□□□ 0.97
RPP40-202ENST00000380051 KNDC1Q76NI1 1749 aa21.12■□□□□ 0.97
RPP40-202ENST00000380051 CENPJQ9HC77 1338 aaPredicted RBP21.12■□□□□ 0.97
RPP40-202ENST00000380051 KCNA6P17658 529 aa21.12■□□□□ 0.97
RPP40-202ENST00000380051 HIRIP3Q9BW71 556 aaPredicted RBP21.12■□□□□ 0.97
RPP40-202ENST00000380051 ARHGEF28Q8N1W1 1705 aaKnown RBP21.11■□□□□ 0.97
RPP40-202ENST00000380051 POGKQ9P215 609 aa21.1■□□□□ 0.97
RPP40-202ENST00000380051 FAM135BQ49AJ0 1406 aa21.1■□□□□ 0.97
RPP40-202ENST00000380051 PRAM1Q96QH2 718 aa21.09■□□□□ 0.97
RPP40-202ENST00000380051 CPS1P31327 1500 aa21.09■□□□□ 0.97
RPP40-202ENST00000380051 TESK2Q96S53 571 aa21.08■□□□□ 0.97
RPP40-202ENST00000380051 XRN1Q8IZH2 1706 aaKnown RBP21.08■□□□□ 0.96
RPP40-202ENST00000380051 PTCH1Q13635 1447 aa21.08■□□□□ 0.96
RPP40-202ENST00000380051 SBNO2Q9Y2G9 1366 aa21.06■□□□□ 0.96
RPP40-202ENST00000380051 WAPLQ7Z5K2 1190 aa21.06■□□□□ 0.96
RPP40-202ENST00000380051 ROBO2Q9HCK4 1378 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms