RNA–Protein interactions for RNA: ENST00000378839.1

CCDC3-202, Transcript of coiled-coil domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC3, Length 3,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3-202ENST00000378839 NPM1P06748 294 aaKnown RBP eCLIP18.04■□□□□ 0.48
CCDC3-202ENST00000378839 CFAP70Q5T0N1 1121 aa18.04■□□□□ 0.48
CCDC3-202ENST00000378839 CD109Q6YHK3 1445 aa18.03■□□□□ 0.48
CCDC3-202ENST00000378839 WASHC2CQ9Y4E1 1318 aa18.03■□□□□ 0.48
CCDC3-202ENST00000378839 ABCA6Q8N139 1617 aa18.02■□□□□ 0.48
CCDC3-202ENST00000378839 POGZQ7Z3K3 1410 aa18.02■□□□□ 0.47
CCDC3-202ENST00000378839 MYOM1P52179 1685 aa18.01■□□□□ 0.47
CCDC3-202ENST00000378839 MAP3K4Q9Y6R4 1608 aa18.01■□□□□ 0.47
CCDC3-202ENST00000378839 NEURL4Q96JN8 1562 aa18.01■□□□□ 0.47
CCDC3-202ENST00000378839 IFT172Q9UG01 1749 aa18■□□□□ 0.47
CCDC3-202ENST00000378839 LMTK2Q8IWU2 1503 aa18■□□□□ 0.47
CCDC3-202ENST00000378839 AMER1Q5JTC6 1135 aaPredicted RBP17.99■□□□□ 0.47
CCDC3-202ENST00000378839 CDCA7LQ96GN5 454 aa17.99■□□□□ 0.47
CCDC3-202ENST00000378839 KIAA1210Q9ULL0 1709 aa17.98■□□□□ 0.47
CCDC3-202ENST00000378839 MYOM2P54296 1465 aa17.98■□□□□ 0.47
CCDC3-202ENST00000378839 STAC3Q96MF2 364 aa17.98■□□□□ 0.47
CCDC3-202ENST00000378839 NPATQ14207 1427 aa17.97■□□□□ 0.47
CCDC3-202ENST00000378839 KIF1BO60333 1816 aa17.97■□□□□ 0.47
CCDC3-202ENST00000378839 BLMP54132 1417 aaPredicted RBP17.97■□□□□ 0.47
CCDC3-202ENST00000378839 MLH3Q9UHC1 1453 aa17.96■□□□□ 0.47
CCDC3-202ENST00000378839 RAPGEF3O95398 923 aa17.96■□□□□ 0.47
CCDC3-202ENST00000378839 SYNMO15061 1565 aa17.96■□□□□ 0.47
CCDC3-202ENST00000378839 NRXN1Q9ULB1 1477 aa17.96■□□□□ 0.47
CCDC3-202ENST00000378839 GGT6Q6P531 493 aa17.95■□□□□ 0.46
CCDC3-202ENST00000378839 CFAP65Q6ZU64 1925 aaKnown RBP17.95■□□□□ 0.46
CCDC3-202ENST00000378839 PPP2R1AP30153 589 aa17.95■□□□□ 0.46
CCDC3-202ENST00000378839 ERVK-7P63135 1459 aa17.95■□□□□ 0.46
CCDC3-202ENST00000378839 ADGRB3O60242 1522 aa17.94■□□□□ 0.46
CCDC3-202ENST00000378839 HECW2Q9P2P5 1572 aa17.94■□□□□ 0.46
CCDC3-202ENST00000378839 NOS1P29475 1434 aa17.94■□□□□ 0.46
CCDC3-202ENST00000378839 ADAMTS8Q9UP79 889 aa17.93■□□□□ 0.46
CCDC3-202ENST00000378839 KNSTRNQ9Y448 316 aa17.93■□□□□ 0.46
CCDC3-202ENST00000378839 MSH5O43196 834 aa17.92■□□□□ 0.46
CCDC3-202ENST00000378839 CFAP74Q9C0B2 1584 aa17.91■□□□□ 0.46
CCDC3-202ENST00000378839 SIGLEC1Q9BZZ2 1709 aa17.91■□□□□ 0.46
CCDC3-202ENST00000378839 CARD14Q9BXL6 1004 aa17.91■□□□□ 0.46
CCDC3-202ENST00000378839 ABCC3O15438 1527 aa17.9■□□□□ 0.46
CCDC3-202ENST00000378839 ASXL1Q8IXJ9 1541 aa17.9■□□□□ 0.46
CCDC3-202ENST00000378839 CHGAP10645 457 aaKnown RBP17.9■□□□□ 0.46
CCDC3-202ENST00000378839 RRP1P56182 461 aaKnown RBP17.89■□□□□ 0.45
CCDC3-202ENST00000378839 EIF3AQ14152 1382 aaKnown RBP17.89■□□□□ 0.45
CCDC3-202ENST00000378839 KDM5AP29375 1690 aaKnown RBP17.89■□□□□ 0.45
CCDC3-202ENST00000378839 RCAN3Q9UKA8 241 aa17.89■□□□□ 0.45
CCDC3-202ENST00000378839 INSRP06213 1382 aa17.88■□□□□ 0.45
CCDC3-202ENST00000378839 ZMYM4Q5VZL5 1548 aa17.88■□□□□ 0.45
CCDC3-202ENST00000378839 PPLO60437 1756 aa17.87■□□□□ 0.45
CCDC3-202ENST00000378839 PIK3C2GO75747 1445 aa17.87■□□□□ 0.45
CCDC3-202ENST00000378839 CDCA8Q53HL2 280 aa17.87■□□□□ 0.45
CCDC3-202ENST00000378839 GLI2P10070 1586 aa17.86■□□□□ 0.45
CCDC3-202ENST00000378839 TMEM132EQ6IEE7 984 aa17.86■□□□□ 0.45
CCDC3-202ENST00000378839 MYO3AQ8NEV4 1616 aa17.86■□□□□ 0.45
CCDC3-202ENST00000378839 PDE3BQ13370 1112 aa17.85■□□□□ 0.45
CCDC3-202ENST00000378839 EXOC6Q8TAG9 804 aa17.85■□□□□ 0.45
CCDC3-202ENST00000378839 ADGRB1O14514 1584 aa17.85■□□□□ 0.45
CCDC3-202ENST00000378839 DIP2CQ9Y2E4 1556 aa17.85■□□□□ 0.45
CCDC3-202ENST00000378839 PLEKHH1Q9ULM0 1364 aa17.85■□□□□ 0.45
CCDC3-202ENST00000378839 NUTM2DQ5VT03 806 aaPredicted RBP17.85■□□□□ 0.45
CCDC3-202ENST00000378839 CAMSAP1Q5T5Y3 1602 aa17.84■□□□□ 0.45
CCDC3-202ENST00000378839 CCDC136Q96JN2 1154 aa17.84■□□□□ 0.45
CCDC3-202ENST00000378839 NEO1Q92859 1461 aa17.84■□□□□ 0.45
CCDC3-202ENST00000378839 TRAK1Q9UPV9 953 aa17.84■□□□□ 0.45
CCDC3-202ENST00000378839 C14orf93Q9H972 538 aaKnown RBP17.83■□□□□ 0.45
CCDC3-202ENST00000378839 DIP2BQ9P265 1576 aa17.83■□□□□ 0.44
CCDC3-202ENST00000378839 YEATS2Q9ULM3 1422 aa17.83■□□□□ 0.44
CCDC3-202ENST00000378839 SETBP1Q9Y6X0 1596 aa17.83■□□□□ 0.44
CCDC3-202ENST00000378839 NPC1L1Q9UHC9 1359 aa17.83■□□□□ 0.44
CCDC3-202ENST00000378839 PLIN1O60240 522 aa17.82■□□□□ 0.44
CCDC3-202ENST00000378839 RICTORQ6R327 1708 aa17.82■□□□□ 0.44
CCDC3-202ENST00000378839 FANCIQ9NVI1 1328 aa17.8■□□□□ 0.44
CCDC3-202ENST00000378839 PIK3C2BO00750 1634 aa17.8■□□□□ 0.44
CCDC3-202ENST00000378839 ZC3H13Q5T200 1668 aaKnown RBP17.8■□□□□ 0.44
CCDC3-202ENST00000378839 CENPJQ9HC77 1338 aaPredicted RBP17.8■□□□□ 0.44
CCDC3-202ENST00000378839 ZNF521Q96K83 1311 aa17.79■□□□□ 0.44
CCDC3-202ENST00000378839 SBNO2Q9Y2G9 1366 aa17.79■□□□□ 0.44
CCDC3-202ENST00000378839 CCDC146Q8IYE0 955 aa17.78■□□□□ 0.44
CCDC3-202ENST00000378839 QRICH2Q9H0J4 1663 aa17.78■□□□□ 0.44
CCDC3-202ENST00000378839 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.44
CCDC3-202ENST00000378839 NEXMIFQ5QGS0 1516 aa17.77■□□□□ 0.43
CCDC3-202ENST00000378839 WDR43Q15061 677 aaKnown RBP eCLIP17.77■□□□□ 0.43
CCDC3-202ENST00000378839 SLC12A5Q9H2X9 1139 aa17.77■□□□□ 0.43
CCDC3-202ENST00000378839 KIF13AQ9H1H9 1805 aa17.76■□□□□ 0.43
CCDC3-202ENST00000378839 IDI1Q13907 227 aa17.75■□□□□ 0.43
CCDC3-202ENST00000378839 DUSP27Q5VZP5 1158 aa17.75■□□□□ 0.43
CCDC3-202ENST00000378839 SPINK5Q9NQ38 1064 aaPredicted RBP17.75■□□□□ 0.43
CCDC3-202ENST00000378839 C20orf194Q5TEA3 1177 aa17.75■□□□□ 0.43
CCDC3-202ENST00000378839 RPGRIP1LQ68CZ1 1315 aa17.74■□□□□ 0.43
CCDC3-202ENST00000378839 FAM69CQ0P6D2 419 aa17.73■□□□□ 0.43
CCDC3-202ENST00000378839 DMRT2Q9Y5R5 561 aa17.72■□□□□ 0.43
CCDC3-202ENST00000378839 NSD3Q9BZ95 1437 aa17.72■□□□□ 0.43
CCDC3-202ENST00000378839 ARHGAP31Q2M1Z3 1444 aa17.71■□□□□ 0.43
CCDC3-202ENST00000378839 APAF1O14727 1248 aa17.71■□□□□ 0.42
CCDC3-202ENST00000378839 CRBNQ96SW2 442 aa17.71■□□□□ 0.42
CCDC3-202ENST00000378839 MYO5BQ9ULV0 1848 aa17.7■□□□□ 0.42
CCDC3-202ENST00000378839 TULP4Q9NRJ4 1543 aa17.7■□□□□ 0.42
CCDC3-202ENST00000378839 ARHGEF28Q8N1W1 1705 aaKnown RBP17.7■□□□□ 0.42
CCDC3-202ENST00000378839 SLC24A1O60721 1099 aa17.69■□□□□ 0.42
CCDC3-202ENST00000378839 TNNT2P45379 298 aaPredicted RBP17.69■□□□□ 0.42
CCDC3-202ENST00000378839 FBXO31Q5XUX0 539 aaPredicted RBP17.69■□□□□ 0.42
CCDC3-202ENST00000378839 SKAP1Q86WV1 359 aa17.69■□□□□ 0.42
CCDC3-202ENST00000378839 SLFN5Q08AF3 891 aa17.68■□□□□ 0.42
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