RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 IQGAP1P46940 1657 aa20.17■□□□□ 0.82
RAB3IP-203ENST00000378809 ZC3H13Q5T200 1668 aaKnown RBP20.17■□□□□ 0.82
RAB3IP-203ENST00000378809 ARHGAP31Q2M1Z3 1444 aa20.16■□□□□ 0.82
RAB3IP-203ENST00000378809 SIGLEC1Q9BZZ2 1709 aa20.15■□□□□ 0.82
RAB3IP-203ENST00000378809 IFT172Q9UG01 1749 aa20.14■□□□□ 0.81
RAB3IP-203ENST00000378809 KIAA1210Q9ULL0 1709 aa20.14■□□□□ 0.81
RAB3IP-203ENST00000378809 SYNMO15061 1565 aa20.13■□□□□ 0.81
RAB3IP-203ENST00000378809 NRXN1Q9ULB1 1477 aa20.12■□□□□ 0.81
RAB3IP-203ENST00000378809 RPGRIP1LQ68CZ1 1315 aa20.12■□□□□ 0.81
RAB3IP-203ENST00000378809 KIF13AQ9H1H9 1805 aa20.11■□□□□ 0.81
RAB3IP-203ENST00000378809 RALBP1Q15311 655 aa20.11■□□□□ 0.81
RAB3IP-203ENST00000378809 CDCA8Q53HL2 280 aa20.11■□□□□ 0.81
RAB3IP-203ENST00000378809 PANK3Q9H999 370 aa20.11■□□□□ 0.81
RAB3IP-203ENST00000378809 IDI1Q13907 227 aa20.1■□□□□ 0.81
RAB3IP-203ENST00000378809 NUTM2DQ5VT03 806 aaPredicted RBP20.1■□□□□ 0.81
RAB3IP-203ENST00000378809 TMC1Q8TDI8 760 aa20.1■□□□□ 0.81
RAB3IP-203ENST00000378809 MLECQ14165 292 aa20.1■□□□□ 0.81
RAB3IP-203ENST00000378809 KTN1Q86UP2 1357 aaKnown RBP20.1■□□□□ 0.81
RAB3IP-203ENST00000378809 SLC52A1Q9NWF4 448 aa20.09■□□□□ 0.81
RAB3IP-203ENST00000378809 MYBBP1AQ9BQG0 1328 aaKnown RBP20.08■□□□□ 0.81
RAB3IP-203ENST00000378809 PIK3C2GO75747 1445 aa20.08■□□□□ 0.81
RAB3IP-203ENST00000378809 PIK3C2BO00750 1634 aa20.08■□□□□ 0.81
RAB3IP-203ENST00000378809 PER1O15534 1290 aaPredicted RBP20.07■□□□□ 0.8
RAB3IP-203ENST00000378809 FBXO31Q5XUX0 539 aaPredicted RBP20.07■□□□□ 0.8
RAB3IP-203ENST00000378809 PPLO60437 1756 aa20.07■□□□□ 0.8
RAB3IP-203ENST00000378809 REREQ9P2R6 1566 aa20.07■□□□□ 0.8
RAB3IP-203ENST00000378809 VGFO15240 615 aaPredicted RBP20.06■□□□□ 0.8
RAB3IP-203ENST00000378809 CC2D1BQ5T0F9 858 aaKnown RBP20.06■□□□□ 0.8
RAB3IP-203ENST00000378809 AGLP35573 1532 aa20.06■□□□□ 0.8
RAB3IP-203ENST00000378809 C14orf93Q9H972 538 aaKnown RBP20.05■□□□□ 0.8
RAB3IP-203ENST00000378809 TRAK1Q9UPV9 953 aa20.05■□□□□ 0.8
RAB3IP-203ENST00000378809 SUPT16HQ9Y5B9 1047 aaKnown RBP20.05■□□□□ 0.8
RAB3IP-203ENST00000378809 PREX1Q8TCU6 1659 aa20.04■□□□□ 0.8
RAB3IP-203ENST00000378809 SLC24A1O60721 1099 aa20.03■□□□□ 0.8
RAB3IP-203ENST00000378809 TMEM132EQ6IEE7 984 aa20.03■□□□□ 0.8
RAB3IP-203ENST00000378809 PPP6R1Q9UPN7 881 aa20.03■□□□□ 0.8
RAB3IP-203ENST00000378809 SENP3Q9H4L4 574 aaPredicted RBP20.02■□□□□ 0.8
RAB3IP-203ENST00000378809 SETBP1Q9Y6X0 1596 aa20.02■□□□□ 0.8
RAB3IP-203ENST00000378809 PARD3Q8TEW0 1356 aa20.02■□□□□ 0.8
RAB3IP-203ENST00000378809 ARHGEF40Q8TER5 1519 aa20.02■□□□□ 0.8
RAB3IP-203ENST00000378809 STAG3Q9UJ98 1225 aa20.02■□□□□ 0.79
RAB3IP-203ENST00000378809 NEXMIFQ5QGS0 1516 aa20.01■□□□□ 0.79
RAB3IP-203ENST00000378809 BRD4O60885 1362 aaPredicted RBP20.01■□□□□ 0.79
RAB3IP-203ENST00000378809 ERVK-7P63135 1459 aa20.01■□□□□ 0.79
RAB3IP-203ENST00000378809 CENPJQ9HC77 1338 aaPredicted RBP20.01■□□□□ 0.79
RAB3IP-203ENST00000378809 ESF1Q9H501 851 aaKnown RBP20■□□□□ 0.79
RAB3IP-203ENST00000378809 KNSTRNQ9Y448 316 aa20■□□□□ 0.79
RAB3IP-203ENST00000378809 NEFLP07196 543 aa20■□□□□ 0.79
RAB3IP-203ENST00000378809 NLRP13Q86W25 1043 aa20■□□□□ 0.79
RAB3IP-203ENST00000378809 PNISRQ8TF01 805 aaKnown RBP20■□□□□ 0.79
RAB3IP-203ENST00000378809 ZBED9Q6R2W3 1325 aa19.99■□□□□ 0.79
RAB3IP-203ENST00000378809 CLTCQ00610 1675 aaKnown RBP19.99■□□□□ 0.79
RAB3IP-203ENST00000378809 FKBP8Q14318 412 aa19.97■□□□□ 0.79
RAB3IP-203ENST00000378809 ADGRB1O14514 1584 aa19.97■□□□□ 0.79
RAB3IP-203ENST00000378809 KDM5AP29375 1690 aaKnown RBP19.96■□□□□ 0.79
RAB3IP-203ENST00000378809 TMEM131LA2VDJ0 1609 aa19.95■□□□□ 0.78
RAB3IP-203ENST00000378809 SBNO2Q9Y2G9 1366 aa19.94■□□□□ 0.78
RAB3IP-203ENST00000378809 MYO3AQ8NEV4 1616 aa19.94■□□□□ 0.78
RAB3IP-203ENST00000378809 ZFYVE9O95405 1425 aa19.93■□□□□ 0.78
RAB3IP-203ENST00000378809 SENP3-EIF4A1A0A087X0R7 540 aa19.92■□□□□ 0.78
RAB3IP-203ENST00000378809 MYO5BQ9ULV0 1848 aa19.91■□□□□ 0.78
RAB3IP-203ENST00000378809 MYOM1P52179 1685 aa19.91■□□□□ 0.78
RAB3IP-203ENST00000378809 BCANQ96GW7 911 aa19.9■□□□□ 0.78
RAB3IP-203ENST00000378809 STK26Q9P289 416 aa19.9■□□□□ 0.78
RAB3IP-203ENST00000378809 AMER1Q5JTC6 1135 aaPredicted RBP19.9■□□□□ 0.78
RAB3IP-203ENST00000378809 LRPPRCP42704 1394 aaKnown RBP19.89■□□□□ 0.77
RAB3IP-203ENST00000378809 QRICH2Q9H0J4 1663 aa19.88■□□□□ 0.77
RAB3IP-203ENST00000378809 SPATA31D1Q6ZQQ2 1576 aa19.88■□□□□ 0.77
RAB3IP-203ENST00000378809 ASXL1Q8IXJ9 1541 aa19.88■□□□□ 0.77
RAB3IP-203ENST00000378809 ZMYM3Q14202 1370 aa19.88■□□□□ 0.77
RAB3IP-203ENST00000378809 SAFB2Q14151 953 aaKnown RBP eCLIP19.88■□□□□ 0.77
RAB3IP-203ENST00000378809 TRHP20396 242 aaPredicted RBP19.86■□□□□ 0.77
RAB3IP-203ENST00000378809 A2ML1A8K2U0 1454 aa19.84■□□□□ 0.77
RAB3IP-203ENST00000378809 EVC2Q86UK5 1308 aa19.84■□□□□ 0.77
RAB3IP-203ENST00000378809 PPP2R1AP30153 589 aa19.83■□□□□ 0.77
RAB3IP-203ENST00000378809 ARHGEF28Q8N1W1 1705 aaKnown RBP19.82■□□□□ 0.76
RAB3IP-203ENST00000378809 CARD14Q9BXL6 1004 aa19.81■□□□□ 0.76
RAB3IP-203ENST00000378809 SLC12A5Q9H2X9 1139 aa19.81■□□□□ 0.76
RAB3IP-203ENST00000378809 RIMS2Q9UQ26 1411 aa19.81■□□□□ 0.76
RAB3IP-203ENST00000378809 NPC1L1Q9UHC9 1359 aa19.81■□□□□ 0.76
RAB3IP-203ENST00000378809 POGKQ9P215 609 aa19.8■□□□□ 0.76
RAB3IP-203ENST00000378809 SALL2Q9Y467 1007 aaPredicted RBP19.8■□□□□ 0.76
RAB3IP-203ENST00000378809 YTHDC2Q9H6S0 1430 aaKnown RBP19.79■□□□□ 0.76
RAB3IP-203ENST00000378809 IRX6P78412 446 aaPredicted RBP19.79■□□□□ 0.76
RAB3IP-203ENST00000378809 PRAM1Q96QH2 718 aa19.79■□□□□ 0.76
RAB3IP-203ENST00000378809 ALKQ9UM73 1620 aa19.79■□□□□ 0.76
RAB3IP-203ENST00000378809 CABP2Q9NPB3 220 aa19.78■□□□□ 0.76
RAB3IP-203ENST00000378809 TNRQ92752 1358 aa19.78■□□□□ 0.76
RAB3IP-203ENST00000378809 NSD3Q9BZ95 1437 aa19.77■□□□□ 0.76
RAB3IP-203ENST00000378809 PELP1Q8IZL8 1130 aaKnown RBP19.77■□□□□ 0.76
RAB3IP-203ENST00000378809 TULP4Q9NRJ4 1543 aa19.77■□□□□ 0.75
RAB3IP-203ENST00000378809 SRPK2P78362 688 aaKnown RBP19.76■□□□□ 0.75
RAB3IP-203ENST00000378809 NUDCQ9Y266 331 aa19.76■□□□□ 0.75
RAB3IP-203ENST00000378809 MINK1Q8N4C8 1332 aaPredicted RBP19.76■□□□□ 0.75
RAB3IP-203ENST00000378809 SMG6Q86US8 1419 aaKnown RBP19.76■□□□□ 0.75
RAB3IP-203ENST00000378809 WDR43Q15061 677 aaKnown RBP eCLIP19.76■□□□□ 0.75
RAB3IP-203ENST00000378809 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.75■□□□□ 0.75
RAB3IP-203ENST00000378809 PTPRMP28827 1452 aa19.75■□□□□ 0.75
RAB3IP-203ENST00000378809 PLPPR3Q6T4P5 718 aa19.73■□□□□ 0.75
RAB3IP-203ENST00000378809 PUS7Q96PZ0 661 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms