RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 ZCCHC11Q5TAX3 1644 aaKnown RBP20.25■□□□□ 0.83
RER1-203ENST00000378513 DUSP27Q5VZP5 1158 aa20.24■□□□□ 0.83
RER1-203ENST00000378513 WASHC2CQ9Y4E1 1318 aa20.24■□□□□ 0.83
RER1-203ENST00000378513 PLXNC1O60486 1568 aa20.24■□□□□ 0.83
RER1-203ENST00000378513 BLMP54132 1417 aaPredicted RBP20.24■□□□□ 0.83
RER1-203ENST00000378513 SLC4A3P48751 1232 aa20.24■□□□□ 0.83
RER1-203ENST00000378513 TRAK1Q9UPV9 953 aa20.24■□□□□ 0.83
RER1-203ENST00000378513 IL27Q8NEV9 243 aa20.23■□□□□ 0.83
RER1-203ENST00000378513 TCERG1O14776 1098 aaKnown RBP20.23■□□□□ 0.83
RER1-203ENST00000378513 TMEM132EQ6IEE7 984 aa20.23■□□□□ 0.83
RER1-203ENST00000378513 GGT6Q6P531 493 aa20.23■□□□□ 0.83
RER1-203ENST00000378513 CARD14Q9BXL6 1004 aa20.22■□□□□ 0.83
RER1-203ENST00000378513 ABCC1P33527 1531 aa20.22■□□□□ 0.83
RER1-203ENST00000378513 BACH2Q9BYV9 841 aa20.22■□□□□ 0.83
RER1-203ENST00000378513 BCAR3O75815 825 aa20.21■□□□□ 0.83
RER1-203ENST00000378513 RGS3P49796 1198 aa20.21■□□□□ 0.83
RER1-203ENST00000378513 GOLGA2Q08379 1002 aa20.21■□□□□ 0.83
RER1-203ENST00000378513 RRP7AQ9Y3A4 280 aaKnown RBP20.21■□□□□ 0.83
RER1-203ENST00000378513 SHROOM2Q13796 1616 aa20.21■□□□□ 0.83
RER1-203ENST00000378513 SAFB2Q14151 953 aaKnown RBP eCLIP20.19■□□□□ 0.82
RER1-203ENST00000378513 EIF2AK4Q9P2K8 1649 aaKnown RBP20.18■□□□□ 0.82
RER1-203ENST00000378513 SCAF11Q99590 1463 aaKnown RBP20.17■□□□□ 0.82
RER1-203ENST00000378513 CLTCL1P53675 1640 aa20.17■□□□□ 0.82
RER1-203ENST00000378513 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.17■□□□□ 0.82
RER1-203ENST00000378513 CDCA8Q53HL2 280 aa20.16■□□□□ 0.82
RER1-203ENST00000378513 KANK1Q14678 1352 aa20.16■□□□□ 0.82
RER1-203ENST00000378513 MADDQ8WXG6 1647 aa20.16■□□□□ 0.82
RER1-203ENST00000378513 SLC12A5Q9H2X9 1139 aa20.16■□□□□ 0.82
RER1-203ENST00000378513 FANCAO15360 1455 aa20.16■□□□□ 0.82
RER1-203ENST00000378513 CFAP65Q6ZU64 1925 aaKnown RBP20.16■□□□□ 0.82
RER1-203ENST00000378513 ZMYM4Q5VZL5 1548 aa20.15■□□□□ 0.82
RER1-203ENST00000378513 ZFYVE16Q7Z3T8 1539 aa20.14■□□□□ 0.81
RER1-203ENST00000378513 SLFN5Q08AF3 891 aa20.13■□□□□ 0.81
RER1-203ENST00000378513 NEFMP07197 916 aa20.12■□□□□ 0.81
RER1-203ENST00000378513 ADGRL1O94910 1474 aa20.11■□□□□ 0.81
RER1-203ENST00000378513 BCL2L13Q9BXK5 485 aa20.11■□□□□ 0.81
RER1-203ENST00000378513 ZNF521Q96K83 1311 aa20.1■□□□□ 0.81
RER1-203ENST00000378513 LAMC1P11047 1609 aa20.1■□□□□ 0.81
RER1-203ENST00000378513 RNF17Q9BXT8 1623 aaKnown RBP20.1■□□□□ 0.81
RER1-203ENST00000378513 TRPM2O94759 1503 aa20.1■□□□□ 0.81
RER1-203ENST00000378513 ASXL1Q8IXJ9 1541 aa20.1■□□□□ 0.81
RER1-203ENST00000378513 FRAT1Q92837 279 aaPredicted RBP20.1■□□□□ 0.81
RER1-203ENST00000378513 PTPRTO14522 1441 aa20.09■□□□□ 0.81
RER1-203ENST00000378513 EIF3AQ14152 1382 aaKnown RBP20.08■□□□□ 0.8
RER1-203ENST00000378513 PANK1Q8TE04 598 aa20.08■□□□□ 0.8
RER1-203ENST00000378513 ATP7AQ04656 1500 aa20.07■□□□□ 0.8
RER1-203ENST00000378513 MORC1Q86VD1 984 aa20.07■□□□□ 0.8
RER1-203ENST00000378513 NOS1P29475 1434 aa20.07■□□□□ 0.8
RER1-203ENST00000378513 CANXP27824 592 aaKnown RBP20.06■□□□□ 0.8
RER1-203ENST00000378513 TNNQ9UQP3 1299 aa20.06■□□□□ 0.8
RER1-203ENST00000378513 MS4A1P11836 297 aa20.06■□□□□ 0.8
RER1-203ENST00000378513 IQGAP1P46940 1657 aa20.06■□□□□ 0.8
RER1-203ENST00000378513 SPHKAPQ2M3C7 1700 aa20.06■□□□□ 0.8
RER1-203ENST00000378513 COG6Q9Y2V7 657 aa20.05■□□□□ 0.8
RER1-203ENST00000378513 ERVK-7P63135 1459 aa20.05■□□□□ 0.8
RER1-203ENST00000378513 KDM2BQ8NHM5 1336 aa20.05■□□□□ 0.8
RER1-203ENST00000378513 STK26Q9P289 416 aa20.04■□□□□ 0.8
RER1-203ENST00000378513 CENPJQ9HC77 1338 aaPredicted RBP20.04■□□□□ 0.8
RER1-203ENST00000378513 RAPGEF3O95398 923 aa20.04■□□□□ 0.8
RER1-203ENST00000378513 RTEL1-TNFRSF6BF6WH68 1400 aa20.04■□□□□ 0.8
RER1-203ENST00000378513 IGHDP01880 384 aa20.02■□□□□ 0.8
RER1-203ENST00000378513 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.8
RER1-203ENST00000378513 CLUAP1Q96AJ1 413 aa20.02■□□□□ 0.8
RER1-203ENST00000378513 ASXL2Q76L83 1435 aa20.02■□□□□ 0.8
RER1-203ENST00000378513 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.02■□□□□ 0.79
RER1-203ENST00000378513 UHRF1BP1LA0JNW5 1464 aa20.01■□□□□ 0.79
RER1-203ENST00000378513 CENPQQ7L2Z9 268 aaPredicted RBP20.01■□□□□ 0.79
RER1-203ENST00000378513 NSD3Q9BZ95 1437 aa20.01■□□□□ 0.79
RER1-203ENST00000378513 WWC1Q8IX03 1113 aa20■□□□□ 0.79
RER1-203ENST00000378513 SYNMO15061 1565 aa20■□□□□ 0.79
RER1-203ENST00000378513 MTHFSP49914 203 aa20■□□□□ 0.79
RER1-203ENST00000378513 CABP2Q9NPB3 220 aa20■□□□□ 0.79
RER1-203ENST00000378513 CEP152O94986 1710 aa19.99■□□□□ 0.79
RER1-203ENST00000378513 PIK3C2GO75747 1445 aa19.99■□□□□ 0.79
RER1-203ENST00000378513 MYOM1P52179 1685 aa19.99■□□□□ 0.79
RER1-203ENST00000378513 ABCA6Q8N139 1617 aa19.97■□□□□ 0.79
RER1-203ENST00000378513 NPM1P06748 294 aaKnown RBP eCLIP19.97■□□□□ 0.79
RER1-203ENST00000378513 C8orf34Q49A92 452 aa19.97■□□□□ 0.79
RER1-203ENST00000378513 TCP11L2Q8N4U5 519 aa19.97■□□□□ 0.79
RER1-203ENST00000378513 E9PSI1 815 aa19.97■□□□□ 0.79
RER1-203ENST00000378513 TET3O43151 1660 aa19.97■□□□□ 0.79
RER1-203ENST00000378513 TRMT2AQ8IZ69 625 aaKnown RBP19.96■□□□□ 0.79
RER1-203ENST00000378513 NKTRP30414 1462 aaKnown RBP19.94■□□□□ 0.78
RER1-203ENST00000378513 DAXXQ9UER7 740 aaPredicted RBP19.94■□□□□ 0.78
RER1-203ENST00000378513 INSRP06213 1382 aa19.94■□□□□ 0.78
RER1-203ENST00000378513 KDM5AP29375 1690 aaKnown RBP19.94■□□□□ 0.78
RER1-203ENST00000378513 FAM161AQ3B820 660 aa19.93■□□□□ 0.78
RER1-203ENST00000378513 STAC3Q96MF2 364 aa19.93■□□□□ 0.78
RER1-203ENST00000378513 U2AF1L5P0DN76 240 aaPredicted RBP19.93■□□□□ 0.78
RER1-203ENST00000378513 U2AF1Q01081 240 aaKnown RBP eCLIP19.93■□□□□ 0.78
RER1-203ENST00000378513 MROH1Q8NDA8 1641 aa19.93■□□□□ 0.78
RER1-203ENST00000378513 RLBP1P12271 317 aa19.92■□□□□ 0.78
RER1-203ENST00000378513 INO80Q9ULG1 1556 aaPredicted RBP19.92■□□□□ 0.78
RER1-203ENST00000378513 MROH2AA6NES4 1674 aa19.92■□□□□ 0.78
RER1-203ENST00000378513 MAP3K4Q9Y6R4 1608 aa19.92■□□□□ 0.78
RER1-203ENST00000378513 EIF5BO60841 1220 aaKnown RBP19.92■□□□□ 0.78
RER1-203ENST00000378513 NPATQ14207 1427 aa19.91■□□□□ 0.78
RER1-203ENST00000378513 SEC24BO95487 1268 aa19.91■□□□□ 0.78
RER1-203ENST00000378513 C14orf93Q9H972 538 aaKnown RBP19.91■□□□□ 0.78
RER1-203ENST00000378513 BRPF3Q9ULD4 1205 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms