RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 PPLO60437 1756 aa18.48■□□□□ 0.55
CBWD3-203ENST00000377344 NEXMIFQ5QGS0 1516 aa18.48■□□□□ 0.55
CBWD3-203ENST00000377344 STAC3Q96MF2 364 aa18.48■□□□□ 0.55
CBWD3-203ENST00000377344 VGFO15240 615 aaPredicted RBP18.46■□□□□ 0.55
CBWD3-203ENST00000377344 THEMISQ8N1K5 641 aaPredicted RBP18.46■□□□□ 0.55
CBWD3-203ENST00000377344 ADGRF5Q8IZF2 1346 aa18.46■□□□□ 0.55
CBWD3-203ENST00000377344 PRAG1Q86YV5 1406 aa18.46■□□□□ 0.55
CBWD3-203ENST00000377344 RIMS2Q9UQ26 1411 aa18.46■□□□□ 0.55
CBWD3-203ENST00000377344 SENP3Q9H4L4 574 aaPredicted RBP18.46■□□□□ 0.55
CBWD3-203ENST00000377344 MYOM2P54296 1465 aa18.46■□□□□ 0.54
CBWD3-203ENST00000377344 ZNF142P52746 1687 aaPredicted RBP18.45■□□□□ 0.54
CBWD3-203ENST00000377344 TMEM2Q9UHN6 1383 aa18.44■□□□□ 0.54
CBWD3-203ENST00000377344 HDGFP51858 240 aaKnown RBP18.44■□□□□ 0.54
CBWD3-203ENST00000377344 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.43■□□□□ 0.54
CBWD3-203ENST00000377344 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
CBWD3-203ENST00000377344 ZFYVE9O95405 1425 aa18.42■□□□□ 0.54
CBWD3-203ENST00000377344 EID1Q9Y6B2 187 aa18.41■□□□□ 0.54
CBWD3-203ENST00000377344 TXNDC2Q86VQ3 553 aa18.4■□□□□ 0.54
CBWD3-203ENST00000377344 NRXN1Q9ULB1 1477 aa18.39■□□□□ 0.54
CBWD3-203ENST00000377344 BCANQ96GW7 911 aa18.39■□□□□ 0.53
CBWD3-203ENST00000377344 SLIT1O75093 1534 aa18.39■□□□□ 0.53
CBWD3-203ENST00000377344 ROCK2O75116 1388 aaKnown RBP18.39■□□□□ 0.53
CBWD3-203ENST00000377344 TRPM1Q7Z4N2 1603 aa18.39■□□□□ 0.53
CBWD3-203ENST00000377344 PIK3C2GO75747 1445 aa18.38■□□□□ 0.53
CBWD3-203ENST00000377344 RALGAPBQ86X10 1494 aa18.38■□□□□ 0.53
CBWD3-203ENST00000377344 ARHGAP23Q9P227 1491 aa18.38■□□□□ 0.53
CBWD3-203ENST00000377344 LTKP29376 864 aa18.37■□□□□ 0.53
CBWD3-203ENST00000377344 CFAP70Q5T0N1 1121 aa18.37■□□□□ 0.53
CBWD3-203ENST00000377344 NBPF1Q3BBV0 1214 aa18.36■□□□□ 0.53
CBWD3-203ENST00000377344 CARD11Q9BXL7 1154 aa18.35■□□□□ 0.53
CBWD3-203ENST00000377344 ANKLE2Q86XL3 938 aa18.35■□□□□ 0.53
CBWD3-203ENST00000377344 SCAF11Q99590 1463 aaKnown RBP18.33■□□□□ 0.53
CBWD3-203ENST00000377344 C14orf93Q9H972 538 aaKnown RBP18.33■□□□□ 0.53
CBWD3-203ENST00000377344 KIAA1210Q9ULL0 1709 aa18.33■□□□□ 0.52
CBWD3-203ENST00000377344 HSPA2P54652 639 aa18.32■□□□□ 0.52
CBWD3-203ENST00000377344 PLEKHG1Q9ULL1 1385 aa18.31■□□□□ 0.52
CBWD3-203ENST00000377344 LMTK3Q96Q04 1460 aa18.31■□□□□ 0.52
CBWD3-203ENST00000377344 LAMC1P11047 1609 aa18.31■□□□□ 0.52
CBWD3-203ENST00000377344 IQGAP1P46940 1657 aa18.3■□□□□ 0.52
CBWD3-203ENST00000377344 ALKQ9UM73 1620 aa18.3■□□□□ 0.52
CBWD3-203ENST00000377344 TMEM132EQ6IEE7 984 aa18.3■□□□□ 0.52
CBWD3-203ENST00000377344 EIF4G2P78344 907 aaKnown RBP eCLIP18.29■□□□□ 0.52
CBWD3-203ENST00000377344 GPRASP1Q5JY77 1395 aa18.29■□□□□ 0.52
CBWD3-203ENST00000377344 SETBP1Q9Y6X0 1596 aa18.28■□□□□ 0.52
CBWD3-203ENST00000377344 NRXN3Q9Y4C0 1643 aa18.28■□□□□ 0.52
CBWD3-203ENST00000377344 NCKAP5LQ9HCH0 1330 aa18.28■□□□□ 0.52
CBWD3-203ENST00000377344 HIRIP3Q9BW71 556 aaPredicted RBP18.28■□□□□ 0.52
CBWD3-203ENST00000377344 SLC26A8Q96RN1 970 aa18.27■□□□□ 0.52
CBWD3-203ENST00000377344 USP47Q96K76 1375 aa18.27■□□□□ 0.52
CBWD3-203ENST00000377344 POLR1AO95602 1720 aaPredicted RBP18.26■□□□□ 0.51
CBWD3-203ENST00000377344 HSPA5P11021 654 aaKnown RBP18.26■□□□□ 0.51
CBWD3-203ENST00000377344 ADGRB1O14514 1584 aa18.24■□□□□ 0.51
CBWD3-203ENST00000377344 STK26Q9P289 416 aa18.24■□□□□ 0.51
CBWD3-203ENST00000377344 NPHP4O75161 1426 aaPredicted RBP18.24■□□□□ 0.51
CBWD3-203ENST00000377344 ADAMTS13Q76LX8 1427 aa18.24■□□□□ 0.51
CBWD3-203ENST00000377344 TRAK1Q9UPV9 953 aa18.23■□□□□ 0.51
CBWD3-203ENST00000377344 ASXL1Q8IXJ9 1541 aa18.22■□□□□ 0.51
CBWD3-203ENST00000377344 METP08581 1390 aa18.22■□□□□ 0.51
CBWD3-203ENST00000377344 SETD1AO15047 1707 aaKnown RBP18.22■□□□□ 0.51
CBWD3-203ENST00000377344 MED14O60244 1454 aa18.21■□□□□ 0.51
CBWD3-203ENST00000377344 TBX22Q9Y458 520 aa18.21■□□□□ 0.51
CBWD3-203ENST00000377344 EIF3AQ14152 1382 aaKnown RBP18.2■□□□□ 0.5
CBWD3-203ENST00000377344 YTHDC2Q9H6S0 1430 aaKnown RBP18.2■□□□□ 0.5
CBWD3-203ENST00000377344 DIP2AQ14689 1571 aa18.2■□□□□ 0.5
CBWD3-203ENST00000377344 ST20-MTHFSA0A0A6YYL1 179 aa18.2■□□□□ 0.5
CBWD3-203ENST00000377344 ZNF316A6NFI3 1004 aaPredicted RBP18.19■□□□□ 0.5
CBWD3-203ENST00000377344 LRPPRCP42704 1394 aaKnown RBP18.16■□□□□ 0.5
CBWD3-203ENST00000377344 STRCQ7RTU9 1775 aa18.15■□□□□ 0.5
CBWD3-203ENST00000377344 CENPJQ9HC77 1338 aaPredicted RBP18.14■□□□□ 0.49
CBWD3-203ENST00000377344 SAFB2Q14151 953 aaKnown RBP eCLIP18.14■□□□□ 0.49
CBWD3-203ENST00000377344 POGKQ9P215 609 aa18.14■□□□□ 0.49
CBWD3-203ENST00000377344 AMOTL2Q9Y2J4 779 aa18.14■□□□□ 0.49
CBWD3-203ENST00000377344 ARHGEF28Q8N1W1 1705 aaKnown RBP18.14■□□□□ 0.49
CBWD3-203ENST00000377344 PTPRUQ92729 1446 aa18.13■□□□□ 0.49
CBWD3-203ENST00000377344 ABCC11Q96J66 1382 aa18.13■□□□□ 0.49
CBWD3-203ENST00000377344 PRAM1Q96QH2 718 aa18.12■□□□□ 0.49
CBWD3-203ENST00000377344 PIK3R4Q99570 1358 aa18.12■□□□□ 0.49
CBWD3-203ENST00000377344 DLC1Q96QB1 1528 aa18.1■□□□□ 0.49
CBWD3-203ENST00000377344 WAPLQ7Z5K2 1190 aa18.09■□□□□ 0.49
CBWD3-203ENST00000377344 KNDC1Q76NI1 1749 aa18.09■□□□□ 0.49
CBWD3-203ENST00000377344 KCNA6P17658 529 aa18.09■□□□□ 0.49
CBWD3-203ENST00000377344 TESK2Q96S53 571 aa18.09■□□□□ 0.49
CBWD3-203ENST00000377344 QRICH2Q9H0J4 1663 aa18.09■□□□□ 0.49
CBWD3-203ENST00000377344 TECPR2O15040 1411 aa18.08■□□□□ 0.49
CBWD3-203ENST00000377344 CPS1P31327 1500 aa18.08■□□□□ 0.49
CBWD3-203ENST00000377344 ROBO2Q9HCK4 1378 aa18.08■□□□□ 0.48
CBWD3-203ENST00000377344 CHD2O14647 1828 aaKnown RBP18.07■□□□□ 0.48
CBWD3-203ENST00000377344 POLR3GLQ9BT43 218 aa18.07■□□□□ 0.48
CBWD3-203ENST00000377344 PLEKHH1Q9ULM0 1364 aa18.07■□□□□ 0.48
CBWD3-203ENST00000377344 TMF1P82094 1093 aa18.07■□□□□ 0.48
CBWD3-203ENST00000377344 DMRT2Q9Y5R5 561 aa18.07■□□□□ 0.48
CBWD3-203ENST00000377344 XRN1Q8IZH2 1706 aaKnown RBP18.06■□□□□ 0.48
CBWD3-203ENST00000377344 C11orf95C9JLR9 678 aaPredicted RBP18.06■□□□□ 0.48
CBWD3-203ENST00000377344 FAM135BQ49AJ0 1406 aa18.06■□□□□ 0.48
CBWD3-203ENST00000377344 MINK1Q8N4C8 1332 aaPredicted RBP18.06■□□□□ 0.48
CBWD3-203ENST00000377344 SIRT1Q96EB6 747 aa18.05■□□□□ 0.48
CBWD3-203ENST00000377344 PTCH1Q13635 1447 aa18.05■□□□□ 0.48
CBWD3-203ENST00000377344 SLC24A1O60721 1099 aa18.04■□□□□ 0.48
CBWD3-203ENST00000377344 DISP3Q9P2K9 1392 aa18.04■□□□□ 0.48
CBWD3-203ENST00000377344 WASHC2AQ641Q2 1341 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms