RNA–Protein interactions for RNA: ENST00000376678.6

LINC01257-201, Transcript of long intergenic non-protein coding RNA 1257, humanhuman

TSL 1 (best) BASIC

Gene LINC01257, Length 2,473 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01257-201ENST00000376678 SMG6Q86US8 1419 aaKnown RBP18.79■□□□□ 0.6
LINC01257-201ENST00000376678 PTPRTO14522 1441 aa18.78■□□□□ 0.6
LINC01257-201ENST00000376678 CEBPAP49715 358 aaPredicted RBP18.78■□□□□ 0.6
LINC01257-201ENST00000376678 TRPM2O94759 1503 aa18.77■□□□□ 0.6
LINC01257-201ENST00000376678 ADAMTSL3P82987 1691 aa18.76■□□□□ 0.59
LINC01257-201ENST00000376678 RIMS1Q86UR5 1692 aaKnown RBP18.76■□□□□ 0.59
LINC01257-201ENST00000376678 MROH2AA6NES4 1674 aa18.76■□□□□ 0.59
LINC01257-201ENST00000376678 UGGT1Q9NYU2 1555 aa18.75■□□□□ 0.59
LINC01257-201ENST00000376678 PREX1Q8TCU6 1659 aa18.75■□□□□ 0.59
LINC01257-201ENST00000376678 ERVK-7P63135 1459 aa18.75■□□□□ 0.59
LINC01257-201ENST00000376678 RNF123Q5XPI4 1314 aa18.75■□□□□ 0.59
LINC01257-201ENST00000376678 NOS1P29475 1434 aa18.75■□□□□ 0.59
LINC01257-201ENST00000376678 B4GALNT3Q6L9W6 998 aa18.74■□□□□ 0.59
LINC01257-201ENST00000376678 CLTCL1P53675 1640 aa18.73■□□□□ 0.59
LINC01257-201ENST00000376678 SYNMO15061 1565 aa18.72■□□□□ 0.59
LINC01257-201ENST00000376678 C3P01024 1663 aa18.72■□□□□ 0.59
LINC01257-201ENST00000376678 CHGAP10645 457 aaKnown RBP18.71■□□□□ 0.59
LINC01257-201ENST00000376678 SPATA31D1Q6ZQQ2 1576 aa18.7■□□□□ 0.58
LINC01257-201ENST00000376678 RGL3Q3MIN7 710 aa18.7■□□□□ 0.58
LINC01257-201ENST00000376678 TNRQ92752 1358 aa18.68■□□□□ 0.58
LINC01257-201ENST00000376678 USP47Q96K76 1375 aa18.68■□□□□ 0.58
LINC01257-201ENST00000376678 IDI1Q13907 227 aa18.68■□□□□ 0.58
LINC01257-201ENST00000376678 SLC52A1Q9NWF4 448 aa18.68■□□□□ 0.58
LINC01257-201ENST00000376678 NUDCQ9Y266 331 aa18.67■□□□□ 0.58
LINC01257-201ENST00000376678 UHRF1BP1Q6BDS2 1440 aa18.67■□□□□ 0.58
LINC01257-201ENST00000376678 PTPRMP28827 1452 aa18.65■□□□□ 0.58
LINC01257-201ENST00000376678 STAG3Q9UJ98 1225 aa18.65■□□□□ 0.58
LINC01257-201ENST00000376678 PIK3C2BO00750 1634 aa18.65■□□□□ 0.58
LINC01257-201ENST00000376678 RALGAPBQ86X10 1494 aa18.64■□□□□ 0.57
LINC01257-201ENST00000376678 ROCK2O75116 1388 aaKnown RBP18.64■□□□□ 0.57
LINC01257-201ENST00000376678 KDM4FA0A1W2PPD8 638 aa18.64■□□□□ 0.57
LINC01257-201ENST00000376678 DEKP35659 375 aaKnown RBP18.64■□□□□ 0.57
LINC01257-201ENST00000376678 ZNF326Q5BKZ1 582 aaKnown RBP18.64■□□□□ 0.57
LINC01257-201ENST00000376678 KIF1BO60333 1816 aa18.63■□□□□ 0.57
LINC01257-201ENST00000376678 DCAF11Q8TEB1 546 aa18.62■□□□□ 0.57
LINC01257-201ENST00000376678 KDM2AQ9Y2K7 1162 aa18.61■□□□□ 0.57
LINC01257-201ENST00000376678 PNISRQ8TF01 805 aaKnown RBP18.6■□□□□ 0.57
LINC01257-201ENST00000376678 ADGRB3O60242 1522 aa18.6■□□□□ 0.57
LINC01257-201ENST00000376678 LRPPRCP42704 1394 aaKnown RBP18.58■□□□□ 0.57
LINC01257-201ENST00000376678 NLRP1Q9C000 1473 aa18.58■□□□□ 0.56
LINC01257-201ENST00000376678 NOP58Q9Y2X3 529 aaKnown RBP18.57■□□□□ 0.56
LINC01257-201ENST00000376678 TMEM131LA2VDJ0 1609 aa18.56■□□□□ 0.56
LINC01257-201ENST00000376678 KTN1Q86UP2 1357 aaKnown RBP18.56■□□□□ 0.56
LINC01257-201ENST00000376678 MYO3AQ8NEV4 1616 aa18.56■□□□□ 0.56
LINC01257-201ENST00000376678 UBE2Q2Q8WVN8 375 aa18.55■□□□□ 0.56
LINC01257-201ENST00000376678 SALL2Q9Y467 1007 aaPredicted RBP18.55■□□□□ 0.56
LINC01257-201ENST00000376678 NEURL4Q96JN8 1562 aa18.55■□□□□ 0.56
LINC01257-201ENST00000376678 MYO5BQ9ULV0 1848 aa18.54■□□□□ 0.56
LINC01257-201ENST00000376678 NUTM2DQ5VT03 806 aaPredicted RBP18.54■□□□□ 0.56
LINC01257-201ENST00000376678 A2ML1A8K2U0 1454 aa18.54■□□□□ 0.56
LINC01257-201ENST00000376678 CCDC136Q96JN2 1154 aa18.53■□□□□ 0.56
LINC01257-201ENST00000376678 BRD4O60885 1362 aaPredicted RBP18.52■□□□□ 0.56
LINC01257-201ENST00000376678 RPGRIP1LQ68CZ1 1315 aa18.51■□□□□ 0.55
LINC01257-201ENST00000376678 UBR1Q8IWV7 1749 aa18.51■□□□□ 0.55
LINC01257-201ENST00000376678 CEP170BQ9Y4F5 1589 aaPredicted RBP18.5■□□□□ 0.55
LINC01257-201ENST00000376678 TMC1Q8TDI8 760 aa18.49■□□□□ 0.55
LINC01257-201ENST00000376678 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
LINC01257-201ENST00000376678 SETD1BQ9UPS6 1966 aaKnown RBP18.49■□□□□ 0.55
LINC01257-201ENST00000376678 PAK3O75914 559 aaPredicted RBP18.49■□□□□ 0.55
LINC01257-201ENST00000376678 NEXMIFQ5QGS0 1516 aa18.49■□□□□ 0.55
LINC01257-201ENST00000376678 MYBBP1AQ9BQG0 1328 aaKnown RBP18.48■□□□□ 0.55
LINC01257-201ENST00000376678 THEMISQ8N1K5 641 aaPredicted RBP18.48■□□□□ 0.55
LINC01257-201ENST00000376678 ADGRF5Q8IZF2 1346 aa18.48■□□□□ 0.55
LINC01257-201ENST00000376678 RIMS2Q9UQ26 1411 aa18.47■□□□□ 0.55
LINC01257-201ENST00000376678 RALBP1Q15311 655 aa18.47■□□□□ 0.55
LINC01257-201ENST00000376678 PPLO60437 1756 aa18.47■□□□□ 0.55
LINC01257-201ENST00000376678 KDM5AP29375 1690 aaKnown RBP18.47■□□□□ 0.55
LINC01257-201ENST00000376678 CARD11Q9BXL7 1154 aa18.47■□□□□ 0.55
LINC01257-201ENST00000376678 IFT172Q9UG01 1749 aa18.47■□□□□ 0.55
LINC01257-201ENST00000376678 PRAG1Q86YV5 1406 aa18.46■□□□□ 0.55
LINC01257-201ENST00000376678 VGFO15240 615 aaPredicted RBP18.46■□□□□ 0.55
LINC01257-201ENST00000376678 STAC3Q96MF2 364 aa18.46■□□□□ 0.55
LINC01257-201ENST00000376678 IPO9Q96P70 1041 aaKnown RBP18.46■□□□□ 0.55
LINC01257-201ENST00000376678 POLR3GLQ9BT43 218 aa18.46■□□□□ 0.55
LINC01257-201ENST00000376678 TMEM2Q9UHN6 1383 aa18.46■□□□□ 0.55
LINC01257-201ENST00000376678 MYOM2P54296 1465 aa18.46■□□□□ 0.55
LINC01257-201ENST00000376678 ZNF142P52746 1687 aaPredicted RBP18.45■□□□□ 0.54
LINC01257-201ENST00000376678 HDGFP51858 240 aaKnown RBP18.44■□□□□ 0.54
LINC01257-201ENST00000376678 ANP32AP39687 249 aaKnown RBP18.43■□□□□ 0.54
LINC01257-201ENST00000376678 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.43■□□□□ 0.54
LINC01257-201ENST00000376678 ZFYVE9O95405 1425 aa18.43■□□□□ 0.54
LINC01257-201ENST00000376678 ST20-MTHFSA0A0A6YYL1 179 aa18.42■□□□□ 0.54
LINC01257-201ENST00000376678 EID1Q9Y6B2 187 aa18.42■□□□□ 0.54
LINC01257-201ENST00000376678 TXNDC2Q86VQ3 553 aa18.42■□□□□ 0.54
LINC01257-201ENST00000376678 TRPM1Q7Z4N2 1603 aa18.42■□□□□ 0.54
LINC01257-201ENST00000376678 RRP1P56182 461 aaKnown RBP18.41■□□□□ 0.54
LINC01257-201ENST00000376678 CNGB1Q14028 1251 aaPredicted RBP18.41■□□□□ 0.54
LINC01257-201ENST00000376678 PARD3Q8TEW0 1356 aa18.41■□□□□ 0.54
LINC01257-201ENST00000376678 LTKP29376 864 aa18.4■□□□□ 0.54
LINC01257-201ENST00000376678 PIK3C2GO75747 1445 aa18.4■□□□□ 0.54
LINC01257-201ENST00000376678 NRXN1Q9ULB1 1477 aa18.4■□□□□ 0.54
LINC01257-201ENST00000376678 SLIT1O75093 1534 aa18.4■□□□□ 0.54
LINC01257-201ENST00000376678 INSRP06213 1382 aa18.39■□□□□ 0.53
LINC01257-201ENST00000376678 CFAP70Q5T0N1 1121 aa18.39■□□□□ 0.53
LINC01257-201ENST00000376678 ARHGAP23Q9P227 1491 aa18.38■□□□□ 0.53
LINC01257-201ENST00000376678 PDE3BQ13370 1112 aa18.38■□□□□ 0.53
LINC01257-201ENST00000376678 NBPF1Q3BBV0 1214 aa18.38■□□□□ 0.53
LINC01257-201ENST00000376678 LAMC1P11047 1609 aa18.38■□□□□ 0.53
LINC01257-201ENST00000376678 NLRP13Q86W25 1043 aa18.36■□□□□ 0.53
LINC01257-201ENST00000376678 ANKLE2Q86XL3 938 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms