RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 GGNBP2Q9H3C7 697 aa18.33■□□□□ 0.52
TNFRSF1B-201ENST00000376259 IGHDP01880 384 aa18.33■□□□□ 0.52
TNFRSF1B-201ENST00000376259 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
TNFRSF1B-201ENST00000376259 SAMD9Q5K651 1589 aa18.32■□□□□ 0.52
TNFRSF1B-201ENST00000376259 CABP2Q9NPB3 220 aa18.32■□□□□ 0.52
TNFRSF1B-201ENST00000376259 SLFN5Q08AF3 891 aa18.31■□□□□ 0.52
TNFRSF1B-201ENST00000376259 IFT140Q96RY7 1462 aa18.31■□□□□ 0.52
TNFRSF1B-201ENST00000376259 PLEKHH1Q9ULM0 1364 aa18.31■□□□□ 0.52
TNFRSF1B-201ENST00000376259 RNF123Q5XPI4 1314 aa18.3■□□□□ 0.52
TNFRSF1B-201ENST00000376259 RWDD1Q9H446 243 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1B-201ENST00000376259 NUTM2FA1L443 756 aa18.3■□□□□ 0.52
TNFRSF1B-201ENST00000376259 MINK1Q8N4C8 1332 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1B-201ENST00000376259 NAP1L5Q96NT1 182 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1B-201ENST00000376259 DISP1Q96F81 1524 aa18.28■□□□□ 0.52
TNFRSF1B-201ENST00000376259 WASHC2CQ9Y4E1 1318 aa18.27■□□□□ 0.52
TNFRSF1B-201ENST00000376259 HSP90AB1P08238 724 aaKnown RBP18.27■□□□□ 0.52
TNFRSF1B-201ENST00000376259 SYNJ2O15056 1496 aa18.27■□□□□ 0.52
TNFRSF1B-201ENST00000376259 CGNL1Q0VF96 1302 aa18.27■□□□□ 0.51
TNFRSF1B-201ENST00000376259 ATP10BO94823 1461 aa18.26■□□□□ 0.51
TNFRSF1B-201ENST00000376259 PARD3Q8TEW0 1356 aa18.26■□□□□ 0.51
TNFRSF1B-201ENST00000376259 PDZRN3Q9UPQ7 1066 aa18.26■□□□□ 0.51
TNFRSF1B-201ENST00000376259 ADGRF5Q8IZF2 1346 aa18.26■□□□□ 0.51
TNFRSF1B-201ENST00000376259 LRPPRCP42704 1394 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1B-201ENST00000376259 SEC24BO95487 1268 aa18.26■□□□□ 0.51
TNFRSF1B-201ENST00000376259 RALGAPBQ86X10 1494 aa18.25■□□□□ 0.51
TNFRSF1B-201ENST00000376259 ZBTB7CA1YPR0 619 aa18.25■□□□□ 0.51
TNFRSF1B-201ENST00000376259 AMER1Q5JTC6 1135 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1B-201ENST00000376259 LNPKQ9C0E8 428 aa18.25■□□□□ 0.51
TNFRSF1B-201ENST00000376259 EIF3AQ14152 1382 aaKnown RBP18.25■□□□□ 0.51
TNFRSF1B-201ENST00000376259 WWC1Q8IX03 1113 aa18.25■□□□□ 0.51
TNFRSF1B-201ENST00000376259 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
TNFRSF1B-201ENST00000376259 MYH16Q9H6N6 1097 aa18.24■□□□□ 0.51
TNFRSF1B-201ENST00000376259 ABCA5Q8WWZ7 1642 aa18.24■□□□□ 0.51
TNFRSF1B-201ENST00000376259 KIF21AQ7Z4S6 1674 aa18.24■□□□□ 0.51
TNFRSF1B-201ENST00000376259 HSCBQ8IWL3 235 aa18.24■□□□□ 0.51
TNFRSF1B-201ENST00000376259 RAPGEF6Q8TEU7 1601 aa18.23■□□□□ 0.51
TNFRSF1B-201ENST00000376259 KIF14Q15058 1648 aa18.23■□□□□ 0.51
TNFRSF1B-201ENST00000376259 PRAG1Q86YV5 1406 aa18.22■□□□□ 0.51
TNFRSF1B-201ENST00000376259 FBLN1P23142 703 aa18.22■□□□□ 0.51
TNFRSF1B-201ENST00000376259 RUNDC1Q96C34 613 aa18.22■□□□□ 0.51
TNFRSF1B-201ENST00000376259 HMOX1P09601 288 aa18.21■□□□□ 0.51
TNFRSF1B-201ENST00000376259 EXOSC9Q06265 439 aaKnown RBP18.21■□□□□ 0.51
TNFRSF1B-201ENST00000376259 C8orf34Q49A92 452 aa18.21■□□□□ 0.51
TNFRSF1B-201ENST00000376259 C1orf115Q9H7X2 142 aa18.21■□□□□ 0.51
TNFRSF1B-201ENST00000376259 ZKSCAN2Q63HK3 967 aa18.21■□□□□ 0.51
TNFRSF1B-201ENST00000376259 DNMT1P26358 1616 aaKnown RBP18.21■□□□□ 0.5
TNFRSF1B-201ENST00000376259 CCDC141Q6ZP82 1450 aa18.2■□□□□ 0.5
TNFRSF1B-201ENST00000376259 SCAPERQ9BY12 1400 aa18.2■□□□□ 0.5
TNFRSF1B-201ENST00000376259 DZIP1LQ8IYY4 767 aaKnown RBP18.19■□□□□ 0.5
TNFRSF1B-201ENST00000376259 LRRIQ1Q96JM4 1722 aa18.19■□□□□ 0.5
TNFRSF1B-201ENST00000376259 TRIM44Q96DX7 344 aaPredicted RBP18.19■□□□□ 0.5
TNFRSF1B-201ENST00000376259 BCORL1Q5H9F3 1711 aa18.19■□□□□ 0.5
TNFRSF1B-201ENST00000376259 KIAA0556O60303 1618 aa18.18■□□□□ 0.5
TNFRSF1B-201ENST00000376259 RIPK4P57078 832 aa18.18■□□□□ 0.5
TNFRSF1B-201ENST00000376259 ANKRD45Q5TZF3 282 aa18.18■□□□□ 0.5
TNFRSF1B-201ENST00000376259 GCC2Q8IWJ2 1684 aa18.18■□□□□ 0.5
TNFRSF1B-201ENST00000376259 FOXD4L5Q5VV16 416 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1B-201ENST00000376259 FOXD4L4Q8WXT5 416 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1B-201ENST00000376259 CARD14Q9BXL6 1004 aa18.17■□□□□ 0.5
TNFRSF1B-201ENST00000376259 ADAMTS12P58397 1594 aa18.17■□□□□ 0.5
TNFRSF1B-201ENST00000376259 RLBP1P12271 317 aa18.16■□□□□ 0.5
TNFRSF1B-201ENST00000376259 ESF1Q9H501 851 aaKnown RBP18.16■□□□□ 0.5
TNFRSF1B-201ENST00000376259 PCDHB15Q9Y5E8 787 aa18.16■□□□□ 0.5
TNFRSF1B-201ENST00000376259 THUMPD2Q9BTF0 503 aaKnown RBP18.16■□□□□ 0.5
TNFRSF1B-201ENST00000376259 ANP32BQ92688 251 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1B-201ENST00000376259 GOLGA6L3A6NEY3 463 aa18.13■□□□□ 0.49
TNFRSF1B-201ENST00000376259 NOL8Q76FK4 1167 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1B-201ENST00000376259 RARSP54136 660 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1B-201ENST00000376259 C22orf23Q9BZE7 217 aa18.13■□□□□ 0.49
TNFRSF1B-201ENST00000376259 FAM135AQ9P2D6 1515 aa18.13■□□□□ 0.49
TNFRSF1B-201ENST00000376259 C14orf37Q86TY3 774 aa18.12■□□□□ 0.49
TNFRSF1B-201ENST00000376259 ARID3AQ99856 593 aa18.12■□□□□ 0.49
TNFRSF1B-201ENST00000376259 PDE3AQ14432 1141 aa18.11■□□□□ 0.49
TNFRSF1B-201ENST00000376259 FOXD4L6Q3SYB3 417 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1B-201ENST00000376259 FOXD4L3Q6VB84 417 aaPredicted RBP18.11■□□□□ 0.49
TNFRSF1B-201ENST00000376259 A2MP01023 1474 aa18.1■□□□□ 0.49
TNFRSF1B-201ENST00000376259 NOB1Q9ULX3 412 aaKnown RBP18.1■□□□□ 0.49
TNFRSF1B-201ENST00000376259 NSD3Q9BZ95 1437 aa18.1■□□□□ 0.49
TNFRSF1B-201ENST00000376259 SYCP2Q9BX26 1530 aa18.1■□□□□ 0.49
TNFRSF1B-201ENST00000376259 IPO8O15397 1037 aaKnown RBP18.09■□□□□ 0.49
TNFRSF1B-201ENST00000376259 RAPGEF3O95398 923 aa18.09■□□□□ 0.49
TNFRSF1B-201ENST00000376259 HDGFL2Q7Z4V5 671 aaPredicted RBP18.09■□□□□ 0.49
TNFRSF1B-201ENST00000376259 EVC2Q86UK5 1308 aa18.08■□□□□ 0.49
TNFRSF1B-201ENST00000376259 UHRF1BP1Q6BDS2 1440 aa18.08■□□□□ 0.48
TNFRSF1B-201ENST00000376259 L1TD1Q5T7N2 865 aaKnown RBP18.08■□□□□ 0.48
TNFRSF1B-201ENST00000376259 SLC4A10Q6U841 1118 aa18.08■□□□□ 0.48
TNFRSF1B-201ENST00000376259 TARBP1Q13395 1621 aaKnown RBP18.08■□□□□ 0.48
TNFRSF1B-201ENST00000376259 KDM5CP41229 1560 aa18.06■□□□□ 0.48
TNFRSF1B-201ENST00000376259 TBC1D2Q9BYX2 928 aa18.06■□□□□ 0.48
TNFRSF1B-201ENST00000376259 KDM2BQ8NHM5 1336 aa18.06■□□□□ 0.48
TNFRSF1B-201ENST00000376259 SSH1Q8WYL5 1049 aa18.05■□□□□ 0.48
TNFRSF1B-201ENST00000376259 TERF2IPQ9NYB0 399 aa18.05■□□□□ 0.48
TNFRSF1B-201ENST00000376259 PNNQ9H307 717 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1B-201ENST00000376259 NKTRP30414 1462 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1B-201ENST00000376259 DIAPH1O60610 1272 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1B-201ENST00000376259 TMEM57Q8N5G2 664 aa18.04■□□□□ 0.48
TNFRSF1B-201ENST00000376259 GOLGA6L22H0YM25 854 aa18.04■□□□□ 0.48
TNFRSF1B-201ENST00000376259 NECTIN2Q92692 538 aa18.04■□□□□ 0.48
TNFRSF1B-201ENST00000376259 TRAPPC8Q9Y2L5 1435 aa18.04■□□□□ 0.48
TNFRSF1B-201ENST00000376259 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms