RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ABCA6Q8N139 1617 aa17.24■□□□□ 0.35
MSH5-204ENST00000375755 TSPOAP1O95153 1857 aa17.24■□□□□ 0.35
MSH5-204ENST00000375755 NEFMP07197 916 aa17.24■□□□□ 0.35
MSH5-204ENST00000375755 FAM69CQ0P6D2 419 aa17.24■□□□□ 0.35
MSH5-204ENST00000375755 KANK1Q14678 1352 aa17.24■□□□□ 0.35
MSH5-204ENST00000375755 PRDM15P57071 1507 aaPredicted RBP17.24■□□□□ 0.35
MSH5-204ENST00000375755 RICTORQ6R327 1708 aa17.23■□□□□ 0.35
MSH5-204ENST00000375755 HECW2Q9P2P5 1572 aa17.23■□□□□ 0.35
MSH5-204ENST00000375755 EIF2AK4Q9P2K8 1649 aaKnown RBP17.22■□□□□ 0.35
MSH5-204ENST00000375755 TRPM2O94759 1503 aa17.22■□□□□ 0.35
MSH5-204ENST00000375755 PTPRTO14522 1441 aa17.22■□□□□ 0.35
MSH5-204ENST00000375755 MLH3Q9UHC1 1453 aa17.2■□□□□ 0.34
MSH5-204ENST00000375755 EIF5BO60841 1220 aaKnown RBP17.2■□□□□ 0.34
MSH5-204ENST00000375755 WASHC2CQ9Y4E1 1318 aa17.2■□□□□ 0.34
MSH5-204ENST00000375755 USP35Q9P2H5 1018 aa17.19■□□□□ 0.34
MSH5-204ENST00000375755 YEATS2Q9ULM3 1422 aa17.19■□□□□ 0.34
MSH5-204ENST00000375755 EFCAB6Q5THR3 1501 aa17.17■□□□□ 0.34
MSH5-204ENST00000375755 PDE4AP27815 886 aa17.16■□□□□ 0.34
MSH5-204ENST00000375755 TCERG1O14776 1098 aaKnown RBP17.15■□□□□ 0.34
MSH5-204ENST00000375755 RNF17Q9BXT8 1623 aaKnown RBP17.15■□□□□ 0.34
MSH5-204ENST00000375755 DIP2CQ9Y2E4 1556 aa17.15■□□□□ 0.34
MSH5-204ENST00000375755 MADDQ8WXG6 1647 aa17.14■□□□□ 0.34
MSH5-204ENST00000375755 CHGAP10645 457 aaKnown RBP17.14■□□□□ 0.33
MSH5-204ENST00000375755 MROH2AA6NES4 1674 aa17.13■□□□□ 0.33
MSH5-204ENST00000375755 EXOC6Q8TAG9 804 aa17.13■□□□□ 0.33
MSH5-204ENST00000375755 GPRASP1Q5JY77 1395 aa17.13■□□□□ 0.33
MSH5-204ENST00000375755 NPATQ14207 1427 aa17.13■□□□□ 0.33
MSH5-204ENST00000375755 BACH2Q9BYV9 841 aa17.13■□□□□ 0.33
MSH5-204ENST00000375755 DISP3Q9P2K9 1392 aa17.13■□□□□ 0.33
MSH5-204ENST00000375755 TESK2Q96S53 571 aa17.12■□□□□ 0.33
MSH5-204ENST00000375755 PNISRQ8TF01 805 aaKnown RBP17.12■□□□□ 0.33
MSH5-204ENST00000375755 BRPF3Q9ULD4 1205 aa17.12■□□□□ 0.33
MSH5-204ENST00000375755 ADGRF5Q8IZF2 1346 aa17.12■□□□□ 0.33
MSH5-204ENST00000375755 PPM1GO15355 546 aaPredicted RBP17.12■□□□□ 0.33
MSH5-204ENST00000375755 ZMYM4Q5VZL5 1548 aa17.11■□□□□ 0.33
MSH5-204ENST00000375755 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
MSH5-204ENST00000375755 RRP1P56182 461 aaKnown RBP17.1■□□□□ 0.33
MSH5-204ENST00000375755 COL17A1Q9UMD9 1497 aaPredicted RBP17.1■□□□□ 0.33
MSH5-204ENST00000375755 SIGLEC1Q9BZZ2 1709 aa17.1■□□□□ 0.33
MSH5-204ENST00000375755 CFAP70Q5T0N1 1121 aa17.09■□□□□ 0.33
MSH5-204ENST00000375755 NUTM2DQ5VT03 806 aaPredicted RBP17.09■□□□□ 0.33
MSH5-204ENST00000375755 KIF1BO60333 1816 aa17.09■□□□□ 0.33
MSH5-204ENST00000375755 ABCC3O15438 1527 aa17.09■□□□□ 0.33
MSH5-204ENST00000375755 LMTK2Q8IWU2 1503 aa17.09■□□□□ 0.33
MSH5-204ENST00000375755 UBE2Q2Q8WVN8 375 aa17.07■□□□□ 0.32
MSH5-204ENST00000375755 ARID4BQ4LE39 1312 aaPredicted RBP17.06■□□□□ 0.32
MSH5-204ENST00000375755 MS4A1P11836 297 aa17.06■□□□□ 0.32
MSH5-204ENST00000375755 TMC1Q8TDI8 760 aa17.06■□□□□ 0.32
MSH5-204ENST00000375755 LAMC1P11047 1609 aa17.06■□□□□ 0.32
MSH5-204ENST00000375755 CAMSAP1Q5T5Y3 1602 aa17.05■□□□□ 0.32
MSH5-204ENST00000375755 GSE1Q14687 1217 aa17.04■□□□□ 0.32
MSH5-204ENST00000375755 NOS1P29475 1434 aa17.03■□□□□ 0.32
MSH5-204ENST00000375755 IQGAP1P46940 1657 aa17.03■□□□□ 0.32
MSH5-204ENST00000375755 IFT172Q9UG01 1749 aa17.02■□□□□ 0.32
MSH5-204ENST00000375755 RCAN3Q9UKA8 241 aa17.02■□□□□ 0.32
MSH5-204ENST00000375755 LRPPRCP42704 1394 aaKnown RBP17.01■□□□□ 0.31
MSH5-204ENST00000375755 SKAP1Q86WV1 359 aa17■□□□□ 0.31
MSH5-204ENST00000375755 SYNMO15061 1565 aa17■□□□□ 0.31
MSH5-204ENST00000375755 ADGRB3O60242 1522 aa17■□□□□ 0.31
MSH5-204ENST00000375755 NFKBIBQ15653 356 aa17■□□□□ 0.31
MSH5-204ENST00000375755 FBXO31Q5XUX0 539 aaPredicted RBP17■□□□□ 0.31
MSH5-204ENST00000375755 MLECQ14165 292 aa17■□□□□ 0.31
MSH5-204ENST00000375755 PANK3Q9H999 370 aa17■□□□□ 0.31
MSH5-204ENST00000375755 TMF1P82094 1093 aa16.99■□□□□ 0.31
MSH5-204ENST00000375755 PER1O15534 1290 aaPredicted RBP16.98■□□□□ 0.31
MSH5-204ENST00000375755 REREQ9P2R6 1566 aa16.98■□□□□ 0.31
MSH5-204ENST00000375755 CC2D1BQ5T0F9 858 aaKnown RBP16.98■□□□□ 0.31
MSH5-204ENST00000375755 TMEM132EQ6IEE7 984 aa16.98■□□□□ 0.31
MSH5-204ENST00000375755 FRAT1Q92837 279 aaPredicted RBP16.98■□□□□ 0.31
MSH5-204ENST00000375755 DDRGK1Q96HY6 314 aa16.98■□□□□ 0.31
MSH5-204ENST00000375755 IDI1Q13907 227 aa16.98■□□□□ 0.31
MSH5-204ENST00000375755 SCAF11Q99590 1463 aaKnown RBP16.97■□□□□ 0.31
MSH5-204ENST00000375755 SLC4A3P48751 1232 aa16.96■□□□□ 0.31
MSH5-204ENST00000375755 MYOM2P54296 1465 aa16.96■□□□□ 0.31
MSH5-204ENST00000375755 PPLO60437 1756 aa16.96■□□□□ 0.3
MSH5-204ENST00000375755 ARHGEF40Q8TER5 1519 aa16.96■□□□□ 0.3
MSH5-204ENST00000375755 NEURL4Q96JN8 1562 aa16.95■□□□□ 0.3
MSH5-204ENST00000375755 MYO5BQ9ULV0 1848 aa16.95■□□□□ 0.3
MSH5-204ENST00000375755 TRAK1Q9UPV9 953 aa16.93■□□□□ 0.3
MSH5-204ENST00000375755 BRD4O60885 1362 aaPredicted RBP16.93■□□□□ 0.3
MSH5-204ENST00000375755 NRXN1Q9ULB1 1477 aa16.92■□□□□ 0.3
MSH5-204ENST00000375755 KIAA1210Q9ULL0 1709 aa16.92■□□□□ 0.3
MSH5-204ENST00000375755 PIK3C2BO00750 1634 aa16.92■□□□□ 0.3
MSH5-204ENST00000375755 PLIN1O60240 522 aa16.92■□□□□ 0.3
MSH5-204ENST00000375755 STAC3Q96MF2 364 aa16.92■□□□□ 0.3
MSH5-204ENST00000375755 MYBBP1AQ9BQG0 1328 aaKnown RBP16.91■□□□□ 0.3
MSH5-204ENST00000375755 PREX1Q8TCU6 1659 aa16.9■□□□□ 0.3
MSH5-204ENST00000375755 CDCA7LQ96GN5 454 aa16.9■□□□□ 0.3
MSH5-204ENST00000375755 PIK3C2GO75747 1445 aa16.9■□□□□ 0.3
MSH5-204ENST00000375755 AGLP35573 1532 aa16.89■□□□□ 0.29
MSH5-204ENST00000375755 TRHP20396 242 aaPredicted RBP16.89■□□□□ 0.29
MSH5-204ENST00000375755 ZC3H13Q5T200 1668 aaKnown RBP16.89■□□□□ 0.29
MSH5-204ENST00000375755 CRBNQ96SW2 442 aa16.88■□□□□ 0.29
MSH5-204ENST00000375755 ARHGAP31Q2M1Z3 1444 aa16.88■□□□□ 0.29
MSH5-204ENST00000375755 C14orf93Q9H972 538 aaKnown RBP16.88■□□□□ 0.29
MSH5-204ENST00000375755 CLTCQ00610 1675 aaKnown RBP16.88■□□□□ 0.29
MSH5-204ENST00000375755 PDE3BQ13370 1112 aa16.88■□□□□ 0.29
MSH5-204ENST00000375755 KTN1Q86UP2 1357 aaKnown RBP16.87■□□□□ 0.29
MSH5-204ENST00000375755 NEXMIFQ5QGS0 1516 aa16.87■□□□□ 0.29
MSH5-204ENST00000375755 PARD3Q8TEW0 1356 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms