RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 YEATS2Q9ULM3 1422 aa20.26■□□□□ 0.83
MSH5-203ENST00000375750 TRPM2O94759 1503 aa20.26■□□□□ 0.83
MSH5-203ENST00000375750 LRPPRCP42704 1394 aaKnown RBP20.25■□□□□ 0.83
MSH5-203ENST00000375750 RICTORQ6R327 1708 aa20.25■□□□□ 0.83
MSH5-203ENST00000375750 PLIN1O60240 522 aa20.25■□□□□ 0.83
MSH5-203ENST00000375750 ARID4BQ4LE39 1312 aaPredicted RBP20.24■□□□□ 0.83
MSH5-203ENST00000375750 SPHKAPQ2M3C7 1700 aa20.24■□□□□ 0.83
MSH5-203ENST00000375750 RCAN3Q9UKA8 241 aa20.24■□□□□ 0.83
MSH5-203ENST00000375750 WASHC2CQ9Y4E1 1318 aa20.24■□□□□ 0.83
MSH5-203ENST00000375750 CLTCL1P53675 1640 aa20.22■□□□□ 0.83
MSH5-203ENST00000375750 DIP2CQ9Y2E4 1556 aa20.22■□□□□ 0.83
MSH5-203ENST00000375750 RNF17Q9BXT8 1623 aaKnown RBP20.22■□□□□ 0.83
MSH5-203ENST00000375750 CC2D1BQ5T0F9 858 aaKnown RBP20.21■□□□□ 0.83
MSH5-203ENST00000375750 UGGT1Q9NYU2 1555 aa20.21■□□□□ 0.83
MSH5-203ENST00000375750 BRD4O60885 1362 aaPredicted RBP20.21■□□□□ 0.83
MSH5-203ENST00000375750 CEP152O94986 1710 aa20.21■□□□□ 0.83
MSH5-203ENST00000375750 EFCAB6Q5THR3 1501 aa20.21■□□□□ 0.83
MSH5-203ENST00000375750 PPRC1Q5VV67 1664 aaKnown RBP20.2■□□□□ 0.82
MSH5-203ENST00000375750 RALBP1Q15311 655 aa20.19■□□□□ 0.82
MSH5-203ENST00000375750 LAS1LQ9Y4W2 734 aaKnown RBP20.19■□□□□ 0.82
MSH5-203ENST00000375750 TRPM1Q7Z4N2 1603 aa20.18■□□□□ 0.82
MSH5-203ENST00000375750 LMTK2Q8IWU2 1503 aa20.18■□□□□ 0.82
MSH5-203ENST00000375750 NPATQ14207 1427 aa20.17■□□□□ 0.82
MSH5-203ENST00000375750 PDE4AP27815 886 aa20.17■□□□□ 0.82
MSH5-203ENST00000375750 CFAP65Q6ZU64 1925 aaKnown RBP20.15■□□□□ 0.82
MSH5-203ENST00000375750 RTL5Q5HYW3 569 aaPredicted RBP20.15■□□□□ 0.82
MSH5-203ENST00000375750 CHGAP10645 457 aaKnown RBP20.14■□□□□ 0.81
MSH5-203ENST00000375750 NLRP13Q86W25 1043 aa20.14■□□□□ 0.81
MSH5-203ENST00000375750 ABCC3O15438 1527 aa20.14■□□□□ 0.81
MSH5-203ENST00000375750 GPRASP1Q5JY77 1395 aa20.13■□□□□ 0.81
MSH5-203ENST00000375750 PER1O15534 1290 aaPredicted RBP20.12■□□□□ 0.81
MSH5-203ENST00000375750 KTN1Q86UP2 1357 aaKnown RBP20.12■□□□□ 0.81
MSH5-203ENST00000375750 KIF13AQ9H1H9 1805 aa20.11■□□□□ 0.81
MSH5-203ENST00000375750 COL17A1Q9UMD9 1497 aaPredicted RBP20.1■□□□□ 0.81
MSH5-203ENST00000375750 CRBNQ96SW2 442 aa20.1■□□□□ 0.81
MSH5-203ENST00000375750 PARD3Q8TEW0 1356 aa20.1■□□□□ 0.81
MSH5-203ENST00000375750 TCERG1O14776 1098 aaKnown RBP20.09■□□□□ 0.81
MSH5-203ENST00000375750 BACH2Q9BYV9 841 aa20.09■□□□□ 0.81
MSH5-203ENST00000375750 ZMYM4Q5VZL5 1548 aa20.09■□□□□ 0.81
MSH5-203ENST00000375750 C20orf194Q5TEA3 1177 aa20.09■□□□□ 0.81
MSH5-203ENST00000375750 PANK3Q9H999 370 aa20.09■□□□□ 0.81
MSH5-203ENST00000375750 DISP3Q9P2K9 1392 aa20.08■□□□□ 0.81
MSH5-203ENST00000375750 MADDQ8WXG6 1647 aa20.07■□□□□ 0.8
MSH5-203ENST00000375750 ADGRF5Q8IZF2 1346 aa20.07■□□□□ 0.8
MSH5-203ENST00000375750 STAC3Q96MF2 364 aa20.06■□□□□ 0.8
MSH5-203ENST00000375750 CAMSAP1Q5T5Y3 1602 aa20.05■□□□□ 0.8
MSH5-203ENST00000375750 TESK2Q96S53 571 aa20.05■□□□□ 0.8
MSH5-203ENST00000375750 KIF1BO60333 1816 aa20.05■□□□□ 0.8
MSH5-203ENST00000375750 NEFMP07197 916 aa20.04■□□□□ 0.8
MSH5-203ENST00000375750 CFAP70Q5T0N1 1121 aa20.04■□□□□ 0.8
MSH5-203ENST00000375750 MROH2AA6NES4 1674 aa20.03■□□□□ 0.8
MSH5-203ENST00000375750 SIGLEC1Q9BZZ2 1709 aa20.03■□□□□ 0.8
MSH5-203ENST00000375750 MLECQ14165 292 aa20.03■□□□□ 0.8
MSH5-203ENST00000375750 IL27Q8NEV9 243 aa20.02■□□□□ 0.8
MSH5-203ENST00000375750 SLC4A3P48751 1232 aa20.02■□□□□ 0.8
MSH5-203ENST00000375750 PDE3BQ13370 1112 aa20.02■□□□□ 0.8
MSH5-203ENST00000375750 NOS1P29475 1434 aa20.02■□□□□ 0.79
MSH5-203ENST00000375750 NEURL4Q96JN8 1562 aa20.01■□□□□ 0.79
MSH5-203ENST00000375750 LAMC1P11047 1609 aa20.01■□□□□ 0.79
MSH5-203ENST00000375750 RTN4Q9NQC3 1192 aaKnown RBP20.01■□□□□ 0.79
MSH5-203ENST00000375750 IDI1Q13907 227 aa20■□□□□ 0.79
MSH5-203ENST00000375750 FBXO31Q5XUX0 539 aaPredicted RBP20■□□□□ 0.79
MSH5-203ENST00000375750 ADAMTS8Q9UP79 889 aa20■□□□□ 0.79
MSH5-203ENST00000375750 NUTM2DQ5VT03 806 aaPredicted RBP20■□□□□ 0.79
MSH5-203ENST00000375750 ADGRB3O60242 1522 aa19.99■□□□□ 0.79
MSH5-203ENST00000375750 ARHGAP31Q2M1Z3 1444 aa19.99■□□□□ 0.79
MSH5-203ENST00000375750 SYNMO15061 1565 aa19.97■□□□□ 0.79
MSH5-203ENST00000375750 MYOM2P54296 1465 aa19.97■□□□□ 0.79
MSH5-203ENST00000375750 MS4A1P11836 297 aa19.96■□□□□ 0.79
MSH5-203ENST00000375750 TMF1P82094 1093 aa19.95■□□□□ 0.78
MSH5-203ENST00000375750 ZC3H13Q5T200 1668 aaKnown RBP19.95■□□□□ 0.78
MSH5-203ENST00000375750 SCAF11Q99590 1463 aaKnown RBP19.94■□□□□ 0.78
MSH5-203ENST00000375750 SENP3Q9H4L4 574 aaPredicted RBP19.94■□□□□ 0.78
MSH5-203ENST00000375750 IFT172Q9UG01 1749 aa19.93■□□□□ 0.78
MSH5-203ENST00000375750 SLC52A1Q9NWF4 448 aa19.93■□□□□ 0.78
MSH5-203ENST00000375750 BLMP54132 1417 aaPredicted RBP19.92■□□□□ 0.78
MSH5-203ENST00000375750 AGLP35573 1532 aa19.92■□□□□ 0.78
MSH5-203ENST00000375750 REREQ9P2R6 1566 aa19.92■□□□□ 0.78
MSH5-203ENST00000375750 NRXN1Q9ULB1 1477 aa19.91■□□□□ 0.78
MSH5-203ENST00000375750 IQGAP1P46940 1657 aa19.91■□□□□ 0.78
MSH5-203ENST00000375750 PIK3C2BO00750 1634 aa19.91■□□□□ 0.78
MSH5-203ENST00000375750 PLEKHH1Q9ULM0 1364 aa19.91■□□□□ 0.78
MSH5-203ENST00000375750 RPGRIP1LQ68CZ1 1315 aa19.91■□□□□ 0.78
MSH5-203ENST00000375750 TRHP20396 242 aaPredicted RBP19.89■□□□□ 0.78
MSH5-203ENST00000375750 TMEM132EQ6IEE7 984 aa19.89■□□□□ 0.78
MSH5-203ENST00000375750 PPP6R1Q9UPN7 881 aa19.89■□□□□ 0.77
MSH5-203ENST00000375750 C14orf93Q9H972 538 aaKnown RBP19.89■□□□□ 0.77
MSH5-203ENST00000375750 ARHGEF40Q8TER5 1519 aa19.88■□□□□ 0.77
MSH5-203ENST00000375750 PPLO60437 1756 aa19.88■□□□□ 0.77
MSH5-203ENST00000375750 CCDC146Q8IYE0 955 aa19.88■□□□□ 0.77
MSH5-203ENST00000375750 ANO8Q9HCE9 1232 aaPredicted RBP19.88■□□□□ 0.77
MSH5-203ENST00000375750 KIAA1210Q9ULL0 1709 aa19.88■□□□□ 0.77
MSH5-203ENST00000375750 PREX1Q8TCU6 1659 aa19.88■□□□□ 0.77
MSH5-203ENST00000375750 PIK3C2GO75747 1445 aa19.88■□□□□ 0.77
MSH5-203ENST00000375750 PPP2R1AP30153 589 aa19.87■□□□□ 0.77
MSH5-203ENST00000375750 VGFO15240 615 aaPredicted RBP19.87■□□□□ 0.77
MSH5-203ENST00000375750 DUSP27Q5VZP5 1158 aa19.87■□□□□ 0.77
MSH5-203ENST00000375750 TRAK1Q9UPV9 953 aa19.86■□□□□ 0.77
MSH5-203ENST00000375750 CLTCQ00610 1675 aaKnown RBP19.86■□□□□ 0.77
MSH5-203ENST00000375750 EIF3AQ14152 1382 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms