RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 LRPPRCP42704 1394 aaKnown RBP18.82■□□□□ 0.6
MSH5-202ENST00000375740 SENP3-EIF4A1A0A087X0R7 540 aa18.82■□□□□ 0.6
MSH5-202ENST00000375740 NEO1Q92859 1461 aa18.82■□□□□ 0.6
MSH5-202ENST00000375740 CC2D1BQ5T0F9 858 aaKnown RBP18.82■□□□□ 0.6
MSH5-202ENST00000375740 NLRP13Q86W25 1043 aa18.82■□□□□ 0.6
MSH5-202ENST00000375740 ADGRF5Q8IZF2 1346 aa18.81■□□□□ 0.6
MSH5-202ENST00000375740 CFAP70Q5T0N1 1121 aa18.81■□□□□ 0.6
MSH5-202ENST00000375740 ABCA6Q8N139 1617 aa18.81■□□□□ 0.6
MSH5-202ENST00000375740 KIAA1210Q9ULL0 1709 aa18.81■□□□□ 0.6
MSH5-202ENST00000375740 MAP3K4Q9Y6R4 1608 aa18.8■□□□□ 0.6
MSH5-202ENST00000375740 CFAP65Q6ZU64 1925 aaKnown RBP18.79■□□□□ 0.6
MSH5-202ENST00000375740 MYOM2P54296 1465 aa18.79■□□□□ 0.6
MSH5-202ENST00000375740 SMG6Q86US8 1419 aaKnown RBP18.79■□□□□ 0.6
MSH5-202ENST00000375740 CYB5RLQ6IPT4 315 aa18.79■□□□□ 0.6
MSH5-202ENST00000375740 MROH2AA6NES4 1674 aa18.79■□□□□ 0.6
MSH5-202ENST00000375740 CHGAP10645 457 aaKnown RBP18.78■□□□□ 0.6
MSH5-202ENST00000375740 NPATQ14207 1427 aa18.78■□□□□ 0.6
MSH5-202ENST00000375740 IFT172Q9UG01 1749 aa18.77■□□□□ 0.6
MSH5-202ENST00000375740 CDCA8Q53HL2 280 aa18.77■□□□□ 0.6
MSH5-202ENST00000375740 ERICH6BQ5W0A0 696 aa18.77■□□□□ 0.59
MSH5-202ENST00000375740 ANO8Q9HCE9 1232 aaPredicted RBP18.76■□□□□ 0.59
MSH5-202ENST00000375740 NUDCQ9Y266 331 aa18.76■□□□□ 0.59
MSH5-202ENST00000375740 EIF3AQ14152 1382 aaKnown RBP18.76■□□□□ 0.59
MSH5-202ENST00000375740 ABCC3O15438 1527 aa18.74■□□□□ 0.59
MSH5-202ENST00000375740 ADGRB3O60242 1522 aa18.73■□□□□ 0.59
MSH5-202ENST00000375740 NOS1P29475 1434 aa18.73■□□□□ 0.59
MSH5-202ENST00000375740 NBR1Q14596 966 aa18.73■□□□□ 0.59
MSH5-202ENST00000375740 NRXN1Q9ULB1 1477 aa18.72■□□□□ 0.59
MSH5-202ENST00000375740 DIP2CQ9Y2E4 1556 aa18.72■□□□□ 0.59
MSH5-202ENST00000375740 KNSTRNQ9Y448 316 aa18.72■□□□□ 0.59
MSH5-202ENST00000375740 RICTORQ6R327 1708 aa18.71■□□□□ 0.59
MSH5-202ENST00000375740 PPP4R2Q9NY27 417 aa18.71■□□□□ 0.59
MSH5-202ENST00000375740 SYNMO15061 1565 aa18.69■□□□□ 0.58
MSH5-202ENST00000375740 CAMSAP1Q5T5Y3 1602 aa18.69■□□□□ 0.58
MSH5-202ENST00000375740 PAK3O75914 559 aaPredicted RBP18.68■□□□□ 0.58
MSH5-202ENST00000375740 AMER1Q5JTC6 1135 aaPredicted RBP18.68■□□□□ 0.58
MSH5-202ENST00000375740 YEATS2Q9ULM3 1422 aa18.67■□□□□ 0.58
MSH5-202ENST00000375740 SLC24A1O60721 1099 aa18.67■□□□□ 0.58
MSH5-202ENST00000375740 PPLO60437 1756 aa18.67■□□□□ 0.58
MSH5-202ENST00000375740 GLI2P10070 1586 aa18.67■□□□□ 0.58
MSH5-202ENST00000375740 B4GALNT3Q6L9W6 998 aa18.67■□□□□ 0.58
MSH5-202ENST00000375740 SALL2Q9Y467 1007 aaPredicted RBP18.67■□□□□ 0.58
MSH5-202ENST00000375740 SIGLEC1Q9BZZ2 1709 aa18.67■□□□□ 0.58
MSH5-202ENST00000375740 MYOM1P52179 1685 aa18.67■□□□□ 0.58
MSH5-202ENST00000375740 KDM5AP29375 1690 aaKnown RBP18.66■□□□□ 0.58
MSH5-202ENST00000375740 C14orf93Q9H972 538 aaKnown RBP18.66■□□□□ 0.58
MSH5-202ENST00000375740 RPGRIP1LQ68CZ1 1315 aa18.66■□□□□ 0.58
MSH5-202ENST00000375740 ERVK-7P63135 1459 aa18.66■□□□□ 0.58
MSH5-202ENST00000375740 RIMBP3CA6NJZ7 1639 aa18.65■□□□□ 0.58
MSH5-202ENST00000375740 RIMBP3BA6NNM3 1639 aa18.65■□□□□ 0.58
MSH5-202ENST00000375740 RIMBP3Q9UFD9 1639 aa18.65■□□□□ 0.58
MSH5-202ENST00000375740 FAM69CQ0P6D2 419 aa18.65■□□□□ 0.58
MSH5-202ENST00000375740 RNF123Q5XPI4 1314 aa18.64■□□□□ 0.58
MSH5-202ENST00000375740 PPP2R1AP30153 589 aa18.64■□□□□ 0.57
MSH5-202ENST00000375740 PIK3C2GO75747 1445 aa18.64■□□□□ 0.57
MSH5-202ENST00000375740 SETBP1Q9Y6X0 1596 aa18.64■□□□□ 0.57
MSH5-202ENST00000375740 ASXL1Q8IXJ9 1541 aa18.63■□□□□ 0.57
MSH5-202ENST00000375740 TRAK1Q9UPV9 953 aa18.63■□□□□ 0.57
MSH5-202ENST00000375740 TMEM132EQ6IEE7 984 aa18.62■□□□□ 0.57
MSH5-202ENST00000375740 MYO3AQ8NEV4 1616 aa18.61■□□□□ 0.57
MSH5-202ENST00000375740 CENPJQ9HC77 1338 aaPredicted RBP18.61■□□□□ 0.57
MSH5-202ENST00000375740 PIK3C2BO00750 1634 aa18.61■□□□□ 0.57
MSH5-202ENST00000375740 NUTM2DQ5VT03 806 aaPredicted RBP18.61■□□□□ 0.57
MSH5-202ENST00000375740 NOP58Q9Y2X3 529 aaKnown RBP18.61■□□□□ 0.57
MSH5-202ENST00000375740 INSRP06213 1382 aa18.61■□□□□ 0.57
MSH5-202ENST00000375740 ARHGAP31Q2M1Z3 1444 aa18.61■□□□□ 0.57
MSH5-202ENST00000375740 BLMP54132 1417 aaPredicted RBP18.6■□□□□ 0.57
MSH5-202ENST00000375740 SBNO2Q9Y2G9 1366 aa18.59■□□□□ 0.57
MSH5-202ENST00000375740 PDE3BQ13370 1112 aa18.59■□□□□ 0.57
MSH5-202ENST00000375740 IDI1Q13907 227 aa18.59■□□□□ 0.57
MSH5-202ENST00000375740 NPC1L1Q9UHC9 1359 aa18.59■□□□□ 0.57
MSH5-202ENST00000375740 ADAMTS8Q9UP79 889 aa18.59■□□□□ 0.57
MSH5-202ENST00000375740 ZC3H13Q5T200 1668 aaKnown RBP18.59■□□□□ 0.57
MSH5-202ENST00000375740 ADGRB1O14514 1584 aa18.58■□□□□ 0.57
MSH5-202ENST00000375740 ZMYM4Q5VZL5 1548 aa18.58■□□□□ 0.57
MSH5-202ENST00000375740 CARD14Q9BXL6 1004 aa18.58■□□□□ 0.56
MSH5-202ENST00000375740 VGFO15240 615 aaPredicted RBP18.57■□□□□ 0.56
MSH5-202ENST00000375740 DIP2BQ9P265 1576 aa18.57■□□□□ 0.56
MSH5-202ENST00000375740 TSPOAP1O95153 1857 aa18.56■□□□□ 0.56
MSH5-202ENST00000375740 CDCA7LQ96GN5 454 aa18.56■□□□□ 0.56
MSH5-202ENST00000375740 SLC52A1Q9NWF4 448 aa18.55■□□□□ 0.56
MSH5-202ENST00000375740 NEXMIFQ5QGS0 1516 aa18.55■□□□□ 0.56
MSH5-202ENST00000375740 WDR43Q15061 677 aaKnown RBP eCLIP18.54■□□□□ 0.56
MSH5-202ENST00000375740 QRICH2Q9H0J4 1663 aa18.54■□□□□ 0.56
MSH5-202ENST00000375740 RCAN3Q9UKA8 241 aa18.52■□□□□ 0.56
MSH5-202ENST00000375740 PREX1Q8TCU6 1659 aa18.51■□□□□ 0.55
MSH5-202ENST00000375740 FBXO31Q5XUX0 539 aaPredicted RBP18.5■□□□□ 0.55
MSH5-202ENST00000375740 IL27Q8NEV9 243 aa18.5■□□□□ 0.55
MSH5-202ENST00000375740 SLC12A5Q9H2X9 1139 aa18.5■□□□□ 0.55
MSH5-202ENST00000375740 CCDC136Q96JN2 1154 aa18.49■□□□□ 0.55
MSH5-202ENST00000375740 MYO5BQ9ULV0 1848 aa18.49■□□□□ 0.55
MSH5-202ENST00000375740 RRP1P56182 461 aaKnown RBP18.49■□□□□ 0.55
MSH5-202ENST00000375740 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
MSH5-202ENST00000375740 ZFYVE9O95405 1425 aa18.47■□□□□ 0.55
MSH5-202ENST00000375740 RTN4Q9NQC3 1192 aaKnown RBP18.47■□□□□ 0.55
MSH5-202ENST00000375740 TMEM131LA2VDJ0 1609 aa18.47■□□□□ 0.55
MSH5-202ENST00000375740 ARHGEF28Q8N1W1 1705 aaKnown RBP18.45■□□□□ 0.54
MSH5-202ENST00000375740 NSD3Q9BZ95 1437 aa18.45■□□□□ 0.54
MSH5-202ENST00000375740 STK26Q9P289 416 aa18.44■□□□□ 0.54
MSH5-202ENST00000375740 EVC2Q86UK5 1308 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms